RNA–Protein interactions for RNA: ENST00000428849.6

KIFC1-211, Transcript of kinesin family member C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KIFC1, Length 2,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC1-211ENST00000428849 NISCHQ9Y2I1 1504 aa33.62■■■□□ 2.97
KIFC1-211ENST00000428849 SHROOM4Q9ULL8 1493 aa28.98■■■□□ 2.23
KIFC1-211ENST00000428849 DCAF8L2P0C7V8 631 aa28.47■■■□□ 2.15
KIFC1-211ENST00000428849 CCDC180Q9P1Z9 1646 aa28.45■■■□□ 2.15
KIFC1-211ENST00000428849 SUPT5HO00267 1087 aaKnown RBP28.41■■■□□ 2.14
KIFC1-211ENST00000428849 ZCCHC6Q5VYS8 1495 aaKnown RBP28.36■■■□□ 2.13
KIFC1-211ENST00000428849 DCAF1Q9Y4B6 1507 aa27.4■■□□□ 1.98
KIFC1-211ENST00000428849 CHIC1Q5VXU3 224 aa27.36■■□□□ 1.97
KIFC1-211ENST00000428849 MYO15BQ96JP2 1530 aa27.14■■□□□ 1.94
KIFC1-211ENST00000428849 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
KIFC1-211ENST00000428849 ABCC9O60706 1549 aa26.87■■□□□ 1.89
KIFC1-211ENST00000428849 LOC105371045A0A1W2PR82 267 aa26.7■■□□□ 1.87
KIFC1-211ENST00000428849 RSF1Q96T23 1441 aaPredicted RBP26.63■■□□□ 1.85
KIFC1-211ENST00000428849 PCGF6Q9BYE7 350 aa26.55■■□□□ 1.84
KIFC1-211ENST00000428849 NACADO15069 1562 aa26.45■■□□□ 1.82
KIFC1-211ENST00000428849 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
KIFC1-211ENST00000428849 CECR2Q9BXF3 1484 aa26.37■■□□□ 1.81
KIFC1-211ENST00000428849 RB1CC1Q8TDY2 1594 aa26.32■■□□□ 1.8
KIFC1-211ENST00000428849 FAM9AQ8IZU1 332 aaPredicted RBP26.31■■□□□ 1.8
KIFC1-211ENST00000428849 HRCP23327 699 aa26.29■■□□□ 1.8
KIFC1-211ENST00000428849 EHMT2Q96KQ7 1210 aa26.24■■□□□ 1.79
KIFC1-211ENST00000428849 MROH2BQ7Z745 1585 aa26.2■■□□□ 1.79
KIFC1-211ENST00000428849 WIZO95785 1651 aa26.05■■□□□ 1.76
KIFC1-211ENST00000428849 PPARGC1BQ86YN6 1023 aaKnown RBP25.95■■□□□ 1.74
KIFC1-211ENST00000428849 TRIM26Q12899 539 aaPredicted RBP25.92■■□□□ 1.74
KIFC1-211ENST00000428849 PABPN1Q86U42 306 aaKnown RBP eCLIP25.82■■□□□ 1.72
KIFC1-211ENST00000428849 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
KIFC1-211ENST00000428849 UNC13AQ9UPW8 1703 aa25.62■■□□□ 1.69
KIFC1-211ENST00000428849 SMARCA4P51532 1647 aa25.61■■□□□ 1.69
KIFC1-211ENST00000428849 CCDC88BA6NC98 1476 aa25.56■■□□□ 1.68
KIFC1-211ENST00000428849 TOP2AP11388 1531 aaKnown RBP25.54■■□□□ 1.68
KIFC1-211ENST00000428849 ABCC8Q09428 1581 aa25.5■■□□□ 1.67
KIFC1-211ENST00000428849 EIF4G1Q04637 1599 aaKnown RBP25.43■■□□□ 1.66
KIFC1-211ENST00000428849 SMARCA2P51531 1590 aa25.43■■□□□ 1.66
KIFC1-211ENST00000428849 BICRAQ9NZM4 1560 aa25.36■■□□□ 1.65
KIFC1-211ENST00000428849 TTBK1Q5TCY1 1321 aaPredicted RBP25.33■■□□□ 1.64
KIFC1-211ENST00000428849 SOGA1O94964 1423 aa25.27■■□□□ 1.64
KIFC1-211ENST00000428849 ZEB1P37275 1124 aaPredicted RBP25.23■■□□□ 1.63
KIFC1-211ENST00000428849 UBTFP17480 764 aaKnown RBP25.21■■□□□ 1.63
KIFC1-211ENST00000428849 CSRNP3Q8WYN3 585 aa25.16■■□□□ 1.62
KIFC1-211ENST00000428849 RUSC2Q8N2Y8 1516 aa25.16■■□□□ 1.62
KIFC1-211ENST00000428849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.06■■□□□ 1.6
KIFC1-211ENST00000428849 WRNQ14191 1432 aaPredicted RBP eCLIP25.06■■□□□ 1.6
KIFC1-211ENST00000428849 CEP162Q5TB80 1403 aa25.06■■□□□ 1.6
KIFC1-211ENST00000428849 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
KIFC1-211ENST00000428849 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
KIFC1-211ENST00000428849 PEG3Q9GZU2 1588 aa24.99■■□□□ 1.59
KIFC1-211ENST00000428849 CCER1Q8TC90 406 aaPredicted RBP24.98■■□□□ 1.59
KIFC1-211ENST00000428849 TNIKQ9UKE5 1360 aa24.97■■□□□ 1.59
KIFC1-211ENST00000428849 EEA1Q15075 1411 aa24.94■■□□□ 1.58
KIFC1-211ENST00000428849 RANGAP1P46060 587 aaPredicted RBP24.92■■□□□ 1.58
KIFC1-211ENST00000428849 SYNJ1O43426 1573 aa24.87■■□□□ 1.57
KIFC1-211ENST00000428849 GOLGA3Q08378 1498 aa24.85■■□□□ 1.57
KIFC1-211ENST00000428849 CEP164Q9UPV0 1460 aa24.71■■□□□ 1.55
KIFC1-211ENST00000428849 CLIP1P30622 1438 aa24.65■■□□□ 1.54
KIFC1-211ENST00000428849 RAPGEF2Q9Y4G8 1499 aa24.62■■□□□ 1.53
KIFC1-211ENST00000428849 APLP2Q06481 763 aa24.61■■□□□ 1.53
KIFC1-211ENST00000428849 HNRNPUL2Q1KMD3 747 aaKnown RBP24.61■■□□□ 1.53
KIFC1-211ENST00000428849 KIF21BO75037 1637 aa24.56■■□□□ 1.52
KIFC1-211ENST00000428849 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
KIFC1-211ENST00000428849 TOP2BQ02880 1626 aa24.5■■□□□ 1.51
KIFC1-211ENST00000428849 VPS8Q8N3P4 1428 aa24.44■■□□□ 1.5
KIFC1-211ENST00000428849 HMGXB3Q12766 1538 aa24.43■■□□□ 1.5
KIFC1-211ENST00000428849 CUX1P39880 1505 aa24.37■■□□□ 1.49
KIFC1-211ENST00000428849 BIVM-ERCC5R4GMW8 1640 aa24.35■■□□□ 1.49
KIFC1-211ENST00000428849 DIEXFQ68CQ4 756 aaKnown RBP24.34■■□□□ 1.49
KIFC1-211ENST00000428849 CFTRP13569 1480 aa24.32■■□□□ 1.48
KIFC1-211ENST00000428849 KIF27Q86VH2 1401 aa24.3■■□□□ 1.48
KIFC1-211ENST00000428849 PRXQ9BXM0 1461 aa24.28■■□□□ 1.48
KIFC1-211ENST00000428849 KANK4Q5T7N3 995 aaPredicted RBP24.22■■□□□ 1.47
KIFC1-211ENST00000428849 ERICH3Q5RHP9 1530 aa24.19■■□□□ 1.46
KIFC1-211ENST00000428849 SCAF1Q9H7N4 1312 aaKnown RBP24.18■■□□□ 1.46
KIFC1-211ENST00000428849 ARAP1Q96P48 1450 aa24.17■■□□□ 1.46
KIFC1-211ENST00000428849 ZNF316A6NFI3 1004 aaPredicted RBP24.16■■□□□ 1.46
KIFC1-211ENST00000428849 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
KIFC1-211ENST00000428849 CUX2O14529 1486 aa24.14■■□□□ 1.46
KIFC1-211ENST00000428849 ITGAEP38570 1179 aa24.08■■□□□ 1.45
KIFC1-211ENST00000428849 IGF1RP08069 1367 aa24.06■■□□□ 1.44
KIFC1-211ENST00000428849 NEUROD1Q13562 356 aa24.04■■□□□ 1.44
KIFC1-211ENST00000428849 CC2D2AQ9P2K1 1620 aa24.03■■□□□ 1.44
KIFC1-211ENST00000428849 P3H3Q8IVL6 736 aa24.01■■□□□ 1.43
KIFC1-211ENST00000428849 FGD5Q6ZNL6 1462 aa24.01■■□□□ 1.43
KIFC1-211ENST00000428849 ARHGAP35Q9NRY4 1499 aa24■■□□□ 1.43
KIFC1-211ENST00000428849 ATP1B4Q9UN42 357 aaPredicted RBP24■■□□□ 1.43
KIFC1-211ENST00000428849 CARMIL1Q5VZK9 1371 aa24■■□□□ 1.43
KIFC1-211ENST00000428849 ACIN1Q9UKV3 1341 aaKnown RBP23.99■■□□□ 1.43
KIFC1-211ENST00000428849 YTHDC1Q96MU7 727 aaKnown RBP23.94■■□□□ 1.42
KIFC1-211ENST00000428849 FANCD2Q9BXW9 1451 aa23.93■■□□□ 1.42
KIFC1-211ENST00000428849 CENPBP07199 599 aaPredicted RBP23.91■■□□□ 1.42
KIFC1-211ENST00000428849 PRDM2Q13029 1718 aa23.9■■□□□ 1.42
KIFC1-211ENST00000428849 PELP1Q8IZL8 1130 aaKnown RBP23.89■■□□□ 1.42
KIFC1-211ENST00000428849 NESP48681 1621 aa23.87■■□□□ 1.41
KIFC1-211ENST00000428849 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
KIFC1-211ENST00000428849 MIER1Q8N108 512 aa23.86■■□□□ 1.41
KIFC1-211ENST00000428849 DHX57Q6P158 1386 aaKnown RBP23.85■■□□□ 1.41
KIFC1-211ENST00000428849 CCNB3Q8WWL7 1395 aa23.84■■□□□ 1.41
KIFC1-211ENST00000428849 GTF3C3Q9Y5Q9 886 aa23.8■■□□□ 1.4
KIFC1-211ENST00000428849 RRBP1Q9P2E9 1410 aaKnown RBP23.8■■□□□ 1.4
KIFC1-211ENST00000428849 FAM50AQ14320 339 aaKnown RBP23.77■■□□□ 1.4
KIFC1-211ENST00000428849 DNAJC5BQ9UF47 199 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms