RNA–Protein interactions for RNA: ENST00000333395.10

EWSR1-204, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene EWSR1, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-204ENST00000333395 NISCHQ9Y2I1 1504 aa34.79■■■■□ 3.16
EWSR1-204ENST00000333395 CCDC180Q9P1Z9 1646 aa30.94■■■□□ 2.54
EWSR1-204ENST00000333395 ABCC9O60706 1549 aa30.3■■■□□ 2.44
EWSR1-204ENST00000333395 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
EWSR1-204ENST00000333395 NACADO15069 1562 aa29.16■■■□□ 2.26
EWSR1-204ENST00000333395 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
EWSR1-204ENST00000333395 MYO15BQ96JP2 1530 aa29.03■■■□□ 2.24
EWSR1-204ENST00000333395 ZCCHC6Q5VYS8 1495 aaKnown RBP28.97■■■□□ 2.23
EWSR1-204ENST00000333395 DCAF1Q9Y4B6 1507 aa28.85■■■□□ 2.21
EWSR1-204ENST00000333395 UNC13AQ9UPW8 1703 aa28.32■■■□□ 2.12
EWSR1-204ENST00000333395 PABPN1Q86U42 306 aaKnown RBP eCLIP28.31■■■□□ 2.12
EWSR1-204ENST00000333395 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
EWSR1-204ENST00000333395 SCRIBQ14160 1630 aa28.15■■■□□ 2.1
EWSR1-204ENST00000333395 SHROOM4Q9ULL8 1493 aa28.11■■■□□ 2.09
EWSR1-204ENST00000333395 DNAJC5BQ9UF47 199 aa27.85■■■□□ 2.05
EWSR1-204ENST00000333395 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
EWSR1-204ENST00000333395 CC2D2AQ9P2K1 1620 aa27.39■■□□□ 1.98
EWSR1-204ENST00000333395 CECR2Q9BXF3 1484 aa27.28■■□□□ 1.96
EWSR1-204ENST00000333395 BAZ1AQ9NRL2 1556 aaPredicted RBP26.99■■□□□ 1.91
EWSR1-204ENST00000333395 SMARCA4P51532 1647 aa26.97■■□□□ 1.91
EWSR1-204ENST00000333395 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
EWSR1-204ENST00000333395 ATAD2BQ9ULI0 1458 aa26.88■■□□□ 1.89
EWSR1-204ENST00000333395 SMARCA2P51531 1590 aa26.88■■□□□ 1.89
EWSR1-204ENST00000333395 MROH2BQ7Z745 1585 aa26.76■■□□□ 1.87
EWSR1-204ENST00000333395 PEG3Q9GZU2 1588 aa26.76■■□□□ 1.87
EWSR1-204ENST00000333395 HMGXB3Q12766 1538 aa26.76■■□□□ 1.87
EWSR1-204ENST00000333395 BAZ1BQ9UIG0 1483 aaKnown RBP26.67■■□□□ 1.86
EWSR1-204ENST00000333395 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
EWSR1-204ENST00000333395 WIZO95785 1651 aa26.41■■□□□ 1.82
EWSR1-204ENST00000333395 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
EWSR1-204ENST00000333395 TOP2AP11388 1531 aaKnown RBP26.23■■□□□ 1.79
EWSR1-204ENST00000333395 LAMC3Q9Y6N6 1575 aa26.18■■□□□ 1.78
EWSR1-204ENST00000333395 NESP48681 1621 aa26.17■■□□□ 1.78
EWSR1-204ENST00000333395 ERCC6Q03468 1493 aa26.17■■□□□ 1.78
EWSR1-204ENST00000333395 CADPSQ9ULU8 1353 aa26.13■■□□□ 1.77
EWSR1-204ENST00000333395 PDS5BQ9NTI5 1447 aa26.06■■□□□ 1.76
EWSR1-204ENST00000333395 CUX2O14529 1486 aa25.96■■□□□ 1.75
EWSR1-204ENST00000333395 CFTRP13569 1480 aa25.95■■□□□ 1.74
EWSR1-204ENST00000333395 CCDC88BA6NC98 1476 aa25.91■■□□□ 1.74
EWSR1-204ENST00000333395 KIF21AQ7Z4S6 1674 aa25.8■■□□□ 1.72
EWSR1-204ENST00000333395 THOC2Q8NI27 1593 aaKnown RBP25.8■■□□□ 1.72
EWSR1-204ENST00000333395 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
EWSR1-204ENST00000333395 CEP164Q9UPV0 1460 aa25.78■■□□□ 1.72
EWSR1-204ENST00000333395 MRC2Q9UBG0 1479 aa25.76■■□□□ 1.71
EWSR1-204ENST00000333395 SUPT5HO00267 1087 aaKnown RBP25.73■■□□□ 1.71
EWSR1-204ENST00000333395 WDR62O43379 1518 aa25.66■■□□□ 1.7
EWSR1-204ENST00000333395 PRDM2Q13029 1718 aa25.6■■□□□ 1.69
EWSR1-204ENST00000333395 URB2Q14146 1524 aaKnown RBP25.51■■□□□ 1.67
EWSR1-204ENST00000333395 ABCC8Q09428 1581 aa25.44■■□□□ 1.66
EWSR1-204ENST00000333395 TOPBP1Q92547 1522 aa25.36■■□□□ 1.65
EWSR1-204ENST00000333395 DNMBPQ6XZF7 1577 aa25.33■■□□□ 1.65
EWSR1-204ENST00000333395 IFT140Q96RY7 1462 aa25.27■■□□□ 1.64
EWSR1-204ENST00000333395 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
EWSR1-204ENST00000333395 DNAJC5Q9H3Z4 198 aa25.23■■□□□ 1.63
EWSR1-204ENST00000333395 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
EWSR1-204ENST00000333395 CUX1P39880 1505 aa25.12■■□□□ 1.61
EWSR1-204ENST00000333395 ZNF608Q9ULD9 1512 aaPredicted RBP25.07■■□□□ 1.6
EWSR1-204ENST00000333395 FGD5Q6ZNL6 1462 aa25.07■■□□□ 1.6
EWSR1-204ENST00000333395 SOGA1O94964 1423 aa25.06■■□□□ 1.6
EWSR1-204ENST00000333395 TARBP1Q13395 1621 aaKnown RBP25.05■■□□□ 1.6
EWSR1-204ENST00000333395 WRNQ14191 1432 aaPredicted RBP eCLIP25■■□□□ 1.59
EWSR1-204ENST00000333395 RAD54L2Q9Y4B4 1467 aa25■■□□□ 1.59
EWSR1-204ENST00000333395 EIF4G3O43432 1585 aaKnown RBP24.96■■□□□ 1.59
EWSR1-204ENST00000333395 WDR97A6NE52 1622 aa24.95■■□□□ 1.58
EWSR1-204ENST00000333395 AQRO60306 1485 aaKnown RBP eCLIP24.94■■□□□ 1.582e-7■■■■□ 21.3
EWSR1-204ENST00000333395 TDRD9Q8NDG6 1382 aaKnown RBP24.91■■□□□ 1.58
EWSR1-204ENST00000333395 TOP2BQ02880 1626 aa24.9■■□□□ 1.58
EWSR1-204ENST00000333395 OSCARQ8IYS5 282 aa24.89■■□□□ 1.58
EWSR1-204ENST00000333395 BIVM-ERCC5R4GMW8 1640 aa24.87■■□□□ 1.57
EWSR1-204ENST00000333395 ABCA10Q8WWZ4 1543 aa24.86■■□□□ 1.57
EWSR1-204ENST00000333395 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
EWSR1-204ENST00000333395 GRIN2BQ13224 1484 aa24.8■■□□□ 1.56
EWSR1-204ENST00000333395 GAPVD1Q14C86 1478 aa24.77■■□□□ 1.56
EWSR1-204ENST00000333395 MAGI1Q96QZ7 1491 aaPredicted RBP24.75■■□□□ 1.55
EWSR1-204ENST00000333395 SNAPC4Q5SXM2 1469 aa24.72■■□□□ 1.55
EWSR1-204ENST00000333395 ABCA5Q8WWZ7 1642 aa24.7■■□□□ 1.54
EWSR1-204ENST00000333395 FBLN2P98095 1184 aa24.67■■□□□ 1.54
EWSR1-204ENST00000333395 CHMP7Q8WUX9 453 aaPredicted RBP24.64■■□□□ 1.54
EWSR1-204ENST00000333395 SYNJ2O15056 1496 aa24.64■■□□□ 1.53
EWSR1-204ENST00000333395 PBRM1Q86U86 1689 aa24.6■■□□□ 1.53
EWSR1-204ENST00000333395 CHD1O14646 1710 aa24.59■■□□□ 1.53
EWSR1-204ENST00000333395 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
EWSR1-204ENST00000333395 FHAD1B1AJZ9 1412 aa24.52■■□□□ 1.52
EWSR1-204ENST00000333395 KIF27Q86VH2 1401 aa24.51■■□□□ 1.51
EWSR1-204ENST00000333395 ADAMTS12P58397 1594 aa24.48■■□□□ 1.51
EWSR1-204ENST00000333395 GRIN2AQ12879 1464 aa24.45■■□□□ 1.51
EWSR1-204ENST00000333395 CLASP1Q7Z460 1538 aa24.43■■□□□ 1.5
EWSR1-204ENST00000333395 ARHGEF11O15085 1522 aa24.41■■□□□ 1.5
EWSR1-204ENST00000333395 IGF1RP08069 1367 aa24.39■■□□□ 1.49
EWSR1-204ENST00000333395 RIMBP3CA6NJZ7 1639 aa24.37■■□□□ 1.49
EWSR1-204ENST00000333395 RIMBP3BA6NNM3 1639 aa24.37■■□□□ 1.49
EWSR1-204ENST00000333395 RIMBP3Q9UFD9 1639 aa24.37■■□□□ 1.49
EWSR1-204ENST00000333395 TRIM41Q8WV44 630 aa24.37■■□□□ 1.49
EWSR1-204ENST00000333395 NUP160Q12769 1436 aa24.36■■□□□ 1.49
EWSR1-204ENST00000333395 CUL7Q14999 1698 aa24.29■■□□□ 1.48
EWSR1-204ENST00000333395 CEP170Q5SW79 1584 aa24.27■■□□□ 1.48
EWSR1-204ENST00000333395 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
EWSR1-204ENST00000333395 ARAP1Q96P48 1450 aa24.2■■□□□ 1.47
EWSR1-204ENST00000333395 CYB5RLQ6IPT4 315 aa24.2■■□□□ 1.46
EWSR1-204ENST00000333395 SHROOM2Q13796 1616 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms