RNA–Protein interactions for RNA: ENST00000530491.1

NUP214-221, Transcript of nucleoporin 214, humanhuman

TSL 3

Gene NUP214, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-221ENST00000530491 NISCHQ9Y2I1 1504 aa15.36■□□□□ 0.05
NUP214-221ENST00000530491 ABCC9O60706 1549 aa15.13■□□□□ 0.01
NUP214-221ENST00000530491 DNAJC5BQ9UF47 199 aa14.95□□□□□ -0.02
NUP214-221ENST00000530491 AEBP2Q6ZN18 517 aaPredicted RBP14.9□□□□□ -0.02
NUP214-221ENST00000530491 CHIC1Q5VXU3 224 aa14.68□□□□□ -0.06
NUP214-221ENST00000530491 DNAJC5Q9H3Z4 198 aa14.47□□□□□ -0.09
NUP214-221ENST00000530491 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
NUP214-221ENST00000530491 RB1CC1Q8TDY2 1594 aa14.01□□□□□ -0.17
NUP214-221ENST00000530491 PABPN1Q86U42 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
NUP214-221ENST00000530491 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
NUP214-221ENST00000530491 NACADO15069 1562 aa13.66□□□□□ -0.22
NUP214-221ENST00000530491 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
NUP214-221ENST00000530491 CC2D2AQ9P2K1 1620 aa13.62□□□□□ -0.23
NUP214-221ENST00000530491 BICRAQ9NZM4 1560 aa13.58□□□□□ -0.24
NUP214-221ENST00000530491 TRIM41Q8WV44 630 aa13.49□□□□□ -0.25
NUP214-221ENST00000530491 CUX2O14529 1486 aa13.46□□□□□ -0.25
NUP214-221ENST00000530491 SHROOM4Q9ULL8 1493 aa13.38□□□□□ -0.27
NUP214-221ENST00000530491 DCAF8L2P0C7V8 631 aa13.38□□□□□ -0.27
NUP214-221ENST00000530491 EIF4G1Q04637 1599 aaKnown RBP13.37□□□□□ -0.27
NUP214-221ENST00000530491 ERCC6Q03468 1493 aa13.19□□□□□ -0.3
NUP214-221ENST00000530491 MYO15BQ96JP2 1530 aa13.15□□□□□ -0.3
NUP214-221ENST00000530491 PHF23Q9BUL5 403 aaPredicted RBP13.02□□□□□ -0.33
NUP214-221ENST00000530491 SCRIBQ14160 1630 aa12.92□□□□□ -0.34
NUP214-221ENST00000530491 THOC2Q8NI27 1593 aaKnown RBP12.8□□□□□ -0.36
NUP214-221ENST00000530491 NESP48681 1621 aa12.71□□□□□ -0.37
NUP214-221ENST00000530491 BAZ1AQ9NRL2 1556 aaPredicted RBP12.68□□□□□ -0.38
NUP214-221ENST00000530491 SMARCA2P51531 1590 aa12.66□□□□□ -0.38
NUP214-221ENST00000530491 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
NUP214-221ENST00000530491 DCAF1Q9Y4B6 1507 aa12.63□□□□□ -0.39
NUP214-221ENST00000530491 TRHP20396 242 aaPredicted RBP12.63□□□□□ -0.39
NUP214-221ENST00000530491 RIMBP3CA6NJZ7 1639 aa12.62□□□□□ -0.39
NUP214-221ENST00000530491 RIMBP3BA6NNM3 1639 aa12.62□□□□□ -0.39
NUP214-221ENST00000530491 RIMBP3Q9UFD9 1639 aa12.62□□□□□ -0.39
NUP214-221ENST00000530491 NCAPD3P42695 1498 aa12.6□□□□□ -0.39
NUP214-221ENST00000530491 ILDR1Q86SU0 546 aaPredicted RBP12.57□□□□□ -0.4
NUP214-221ENST00000530491 ZCCHC6Q5VYS8 1495 aaKnown RBP12.54□□□□□ -0.4
NUP214-221ENST00000530491 KIF21AQ7Z4S6 1674 aa12.54□□□□□ -0.4
NUP214-221ENST00000530491 LAMC3Q9Y6N6 1575 aa12.51□□□□□ -0.41
NUP214-221ENST00000530491 ARHGEF11O15085 1522 aa12.47□□□□□ -0.41
NUP214-221ENST00000530491 PDS5BQ9NTI5 1447 aa12.47□□□□□ -0.41
NUP214-221ENST00000530491 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
NUP214-221ENST00000530491 HMGXB3Q12766 1538 aa12.46□□□□□ -0.42
NUP214-221ENST00000530491 ATAD2BQ9ULI0 1458 aa12.43□□□□□ -0.42
NUP214-221ENST00000530491 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
NUP214-221ENST00000530491 CYB5RLQ6IPT4 315 aa12.42□□□□□ -0.42
NUP214-221ENST00000530491 WDR62O43379 1518 aa12.41□□□□□ -0.42
NUP214-221ENST00000530491 BAZ1BQ9UIG0 1483 aaKnown RBP12.3□□□□□ -0.44
NUP214-221ENST00000530491 ARAP1Q96P48 1450 aa12.28□□□□□ -0.44
NUP214-221ENST00000530491 SMARCA4P51532 1647 aa12.2□□□□□ -0.46
NUP214-221ENST00000530491 CEP164Q9UPV0 1460 aa12.2□□□□□ -0.46
NUP214-221ENST00000530491 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
NUP214-221ENST00000530491 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
NUP214-221ENST00000530491 FANCD2Q9BXW9 1451 aa12.08□□□□□ -0.48
NUP214-221ENST00000530491 PEG3Q9GZU2 1588 aa12.07□□□□□ -0.48
NUP214-221ENST00000530491 CHD1O14646 1710 aa12.02□□□□□ -0.49
NUP214-221ENST00000530491 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
NUP214-221ENST00000530491 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
NUP214-221ENST00000530491 IFT140Q96RY7 1462 aa11.97□□□□□ -0.49
NUP214-221ENST00000530491 PLPPR3Q6T4P5 718 aa11.97□□□□□ -0.49
NUP214-221ENST00000530491 LMTK3Q96Q04 1460 aa11.95□□□□□ -0.5
NUP214-221ENST00000530491 EIF4G3O43432 1585 aaKnown RBP11.94□□□□□ -0.5
NUP214-221ENST00000530491 ERCC6L2Q5T890 1561 aa11.94□□□□□ -0.5
NUP214-221ENST00000530491 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
NUP214-221ENST00000530491 FBLN2P98095 1184 aa11.93□□□□□ -0.5
NUP214-221ENST00000530491 FBXO41Q8TF61 875 aa11.92□□□□□ -0.5
NUP214-221ENST00000530491 SOCS7O14512 581 aa11.85□□□□□ -0.51
NUP214-221ENST00000530491 CLASP1Q7Z460 1538 aa11.85□□□□□ -0.51
NUP214-221ENST00000530491 CFTRP13569 1480 aa11.84□□□□□ -0.51
NUP214-221ENST00000530491 HECW2Q9P2P5 1572 aa11.84□□□□□ -0.51
NUP214-221ENST00000530491 MROH2BQ7Z745 1585 aa11.81□□□□□ -0.52
NUP214-221ENST00000530491 GAPVD1Q14C86 1478 aa11.81□□□□□ -0.52
NUP214-221ENST00000530491 SYNJ1O43426 1573 aa11.79□□□□□ -0.52
NUP214-221ENST00000530491 AQRO60306 1485 aaKnown RBP eCLIP11.78□□□□□ -0.522e-9■■■■□ 25.6
NUP214-221ENST00000530491 KIF13AQ9H1H9 1805 aa11.78□□□□□ -0.52
NUP214-221ENST00000530491 TOPBP1Q92547 1522 aa11.72□□□□□ -0.53
NUP214-221ENST00000530491 KDM6BO15054 1643 aa11.71□□□□□ -0.53
NUP214-221ENST00000530491 ILDR2Q71H61 639 aa11.71□□□□□ -0.53
NUP214-221ENST00000530491 ADGRL1O94910 1474 aa11.69□□□□□ -0.54
NUP214-221ENST00000530491 CHMP7Q8WUX9 453 aaPredicted RBP11.68□□□□□ -0.54
NUP214-221ENST00000530491 PRDM2Q13029 1718 aa11.68□□□□□ -0.54
NUP214-221ENST00000530491 SYNJ2O15056 1496 aa11.68□□□□□ -0.54
NUP214-221ENST00000530491 SNAPC4Q5SXM2 1469 aa11.68□□□□□ -0.54
NUP214-221ENST00000530491 TARBP1Q13395 1621 aaKnown RBP11.68□□□□□ -0.54
NUP214-221ENST00000530491 DISP3Q9P2K9 1392 aa11.67□□□□□ -0.54
NUP214-221ENST00000530491 ABCC8Q09428 1581 aa11.66□□□□□ -0.54
NUP214-221ENST00000530491 FOXD1Q16676 465 aa11.65□□□□□ -0.54
NUP214-221ENST00000530491 WIZO95785 1651 aa11.63□□□□□ -0.55
NUP214-221ENST00000530491 FAM69CQ0P6D2 419 aa11.62□□□□□ -0.55
NUP214-221ENST00000530491 MAGI1Q96QZ7 1491 aaPredicted RBP11.61□□□□□ -0.55
NUP214-221ENST00000530491 DNMBPQ6XZF7 1577 aa11.61□□□□□ -0.55
NUP214-221ENST00000530491 ABCC10Q5T3U5 1492 aa11.59□□□□□ -0.55
NUP214-221ENST00000530491 TDRD9Q8NDG6 1382 aaKnown RBP11.56□□□□□ -0.56
NUP214-221ENST00000530491 DIP2BQ9P265 1576 aa11.54□□□□□ -0.56
NUP214-221ENST00000530491 WDR97A6NE52 1622 aa11.54□□□□□ -0.56
NUP214-221ENST00000530491 POLA1P09884 1462 aaPredicted RBP11.54□□□□□ -0.56
NUP214-221ENST00000530491 TSPOAP1O95153 1857 aa11.51□□□□□ -0.57
NUP214-221ENST00000530491 GRIN2BQ13224 1484 aa11.5□□□□□ -0.57
NUP214-221ENST00000530491 RAD54L2Q9Y4B4 1467 aa11.5□□□□□ -0.57
NUP214-221ENST00000530491 SPATA31D1Q6ZQQ2 1576 aa11.5□□□□□ -0.57
NUP214-221ENST00000530491 MAPKBP1O60336 1514 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms