RNA–Protein interactions for RNA: ENST00000490166.1

RPN1-205, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 573 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-205ENST00000490166 AEBP2Q6ZN18 517 aaPredicted RBP14.51□□□□□ -0.09
RPN1-205ENST00000490166 CHIC1Q5VXU3 224 aa14.1□□□□□ -0.15
RPN1-205ENST00000490166 SENP3Q9H4L4 574 aaPredicted RBP12.4□□□□□ -0.42
RPN1-205ENST00000490166 PHF23Q9BUL5 403 aaPredicted RBP12.36□□□□□ -0.43
RPN1-205ENST00000490166 FOXD1Q16676 465 aa11.47□□□□□ -0.57
RPN1-205ENST00000490166 PLPPR3Q6T4P5 718 aa11.43□□□□□ -0.58
RPN1-205ENST00000490166 PPP6R1Q9UPN7 881 aa10.93□□□□□ -0.66
RPN1-205ENST00000490166 ADRA2BP18089 450 aa10.92□□□□□ -0.66
RPN1-205ENST00000490166 PIAS4Q8N2W9 510 aaPredicted RBP10.81□□□□□ -0.68
RPN1-205ENST00000490166 MSH5O43196 834 aa10.69□□□□□ -0.7
RPN1-205ENST00000490166 SCAF1Q9H7N4 1312 aaKnown RBP10.08□□□□□ -0.8
RPN1-205ENST00000490166 PPP4R3CPQ6ZMV5 832 aa10.03□□□□□ -0.8
RPN1-205ENST00000490166 MAPK8IP2Q13387 824 aaPredicted RBP9.94□□□□□ -0.82
RPN1-205ENST00000490166 POTEDQ86YR6 584 aa9.89□□□□□ -0.83
RPN1-205ENST00000490166 DMRT2Q9Y5R5 561 aa9.87□□□□□ -0.83
RPN1-205ENST00000490166 CNKSR2Q8WXI2 1034 aa9.8□□□□□ -0.84
RPN1-205ENST00000490166 NCBP3Q53F19 620 aaKnown RBP9.78□□□□□ -0.84
RPN1-205ENST00000490166 RNF216Q9NWF9 866 aaPredicted RBP9.64□□□□□ -0.87
RPN1-205ENST00000490166 KCNA4P22459 653 aa9.63□□□□□ -0.87
RPN1-205ENST00000490166 HOXD11P31277 338 aaPredicted RBP9.62□□□□□ -0.87
RPN1-205ENST00000490166 NPM3O75607 178 aaKnown RBP9.58□□□□□ -0.88
RPN1-205ENST00000490166 DCAF8L1A6NGE4 600 aa9.43□□□□□ -0.9
RPN1-205ENST00000490166 DNAJC5BQ9UF47 199 aa9.37□□□□□ -0.91
RPN1-205ENST00000490166 NISCHQ9Y2I1 1504 aa9.36□□□□□ -0.91
RPN1-205ENST00000490166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.18□□□□□ -0.948e-7■■□□□ 11.6
RPN1-205ENST00000490166 SLC4A1APQ9BWU0 796 aaKnown RBP9.18□□□□□ -0.94
RPN1-205ENST00000490166 RNF39Q9H2S5 420 aa9.12□□□□□ -0.95
RPN1-205ENST00000490166 SLC4A2P04920 1241 aa9.06□□□□□ -0.96
RPN1-205ENST00000490166 C1QBPQ07021 282 aaKnown RBP9.04□□□□□ -0.96
RPN1-205ENST00000490166 U3KPZ7 1027 aaPredicted RBP8.98□□□□□ -0.97
RPN1-205ENST00000490166 CACNB1Q02641 598 aaPredicted RBP8.97□□□□□ -0.97
RPN1-205ENST00000490166 FOXD4L1Q9NU39 408 aa8.94□□□□□ -0.98
RPN1-205ENST00000490166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.91□□□□□ -0.98
RPN1-205ENST00000490166 HNRNPUL2Q1KMD3 747 aaKnown RBP8.91□□□□□ -0.98
RPN1-205ENST00000490166 MYCNP04198 464 aaPredicted RBP8.88□□□□□ -0.99
RPN1-205ENST00000490166 APLP2Q06481 763 aa8.86□□□□□ -0.99
RPN1-205ENST00000490166 SAMD1Q6SPF0 538 aaPredicted RBP8.85□□□□□ -0.99
RPN1-205ENST00000490166 ZBTB22O15209 634 aa8.83□□□□□ -1
RPN1-205ENST00000490166 EHMT2Q96KQ7 1210 aa8.77□□□□□ -1.01
RPN1-205ENST00000490166 CAPN15O75808 1086 aa8.76□□□□□ -1.01
RPN1-205ENST00000490166 SPINK5Q9NQ38 1064 aaPredicted RBP8.75□□□□□ -1.01
RPN1-205ENST00000490166 CSRNP3Q8WYN3 585 aa8.72□□□□□ -1.01
RPN1-205ENST00000490166 ZNF219Q9P2Y4 722 aaPredicted RBP8.71□□□□□ -1.02
RPN1-205ENST00000490166 ATXN8OSP0DMR3 200 aa8.67□□□□□ -1.02
RPN1-205ENST00000490166 TRHP20396 242 aaPredicted RBP8.67□□□□□ -1.02
RPN1-205ENST00000490166 DSG3P32926 999 aa8.63□□□□□ -1.03
RPN1-205ENST00000490166 ATF5Q9Y2D1 282 aaPredicted RBP8.59□□□□□ -1.03
RPN1-205ENST00000490166 ABCB7O75027 752 aa8.54□□□□□ -1.04
RPN1-205ENST00000490166 ABCC9O60706 1549 aa8.53□□□□□ -1.04
RPN1-205ENST00000490166 POLA2Q14181 598 aa8.52□□□□□ -1.05
RPN1-205ENST00000490166 ZBTB12Q9Y330 459 aaPredicted RBP8.42□□□□□ -1.06
RPN1-205ENST00000490166 CCDC180Q9P1Z9 1646 aa8.37□□□□□ -1.07
RPN1-205ENST00000490166 FBLN2P98095 1184 aa8.32□□□□□ -1.08
RPN1-205ENST00000490166 RBM42Q9BTD8 480 aaKnown RBP8.28□□□□□ -1.08
RPN1-205ENST00000490166 MKRN4PQ13434 485 aaPredicted RBP8.22□□□□□ -1.09
RPN1-205ENST00000490166 OSCARQ8IYS5 282 aa8.21□□□□□ -1.1
RPN1-205ENST00000490166 DCAF8L2P0C7V8 631 aa8.2□□□□□ -1.1
RPN1-205ENST00000490166 SPDYE2BA6NHP3 402 aa8.16□□□□□ -1.1
RPN1-205ENST00000490166 SPDYE6P0CI01 402 aa8.16□□□□□ -1.1
RPN1-205ENST00000490166 SPDYE2Q495Y8 402 aa8.16□□□□□ -1.1
RPN1-205ENST00000490166 AKT1S1Q96B36 256 aa8.13□□□□□ -1.11
RPN1-205ENST00000490166 ZNF692Q9BU19 519 aaPredicted RBP8.1□□□□□ -1.11
RPN1-205ENST00000490166 SSUH2Q9Y2M2 353 aa8.06□□□□□ -1.12
RPN1-205ENST00000490166 RB1CC1Q8TDY2 1594 aa8.04□□□□□ -1.12
RPN1-205ENST00000490166 REM2Q8IYK8 340 aaPredicted RBP8.03□□□□□ -1.12
RPN1-205ENST00000490166 SPDYE4A6NLX3 237 aa8.02□□□□□ -1.13
RPN1-205ENST00000490166 PABPN1Q86U42 306 aaKnown RBP eCLIP7.97□□□□□ -1.13
RPN1-205ENST00000490166 SPDYE1Q8NFV5 336 aaPredicted RBP7.95□□□□□ -1.14
RPN1-205ENST00000490166 CHRDL2Q6WN34 429 aa7.94□□□□□ -1.14
RPN1-205ENST00000490166 PITPNM1O00562 1244 aa7.92□□□□□ -1.14
RPN1-205ENST00000490166 NACADO15069 1562 aa7.92□□□□□ -1.14
RPN1-205ENST00000490166 FKBP8Q14318 412 aa7.9□□□□□ -1.14
RPN1-205ENST00000490166 CLEC11AQ9Y240 323 aa7.89□□□□□ -1.15
RPN1-205ENST00000490166 STAG3Q9UJ98 1225 aa7.87□□□□□ -1.15
RPN1-205ENST00000490166 PROM2Q8N271 834 aa7.86□□□□□ -1.15
RPN1-205ENST00000490166 PRR29P0C7W0 189 aa7.83□□□□□ -1.16
RPN1-205ENST00000490166 POTEHQ6S545 545 aa7.83□□□□□ -1.16
RPN1-205ENST00000490166 FXR2P51116 673 aaKnown RBP eCLIP7.82□□□□□ -1.16
RPN1-205ENST00000490166 SCRIBQ14160 1630 aa7.81□□□□□ -1.16
RPN1-205ENST00000490166 PIP4P2Q8N4L2 257 aa7.8□□□□□ -1.16
RPN1-205ENST00000490166 ZCCHC6Q5VYS8 1495 aaKnown RBP7.78□□□□□ -1.16
RPN1-205ENST00000490166 PRKAR2AP13861 404 aaKnown RBP7.74□□□□□ -1.17
RPN1-205ENST00000490166 UNC13AQ9UPW8 1703 aa7.73□□□□□ -1.17
RPN1-205ENST00000490166 FBXO3Q9UK99 471 aa7.71□□□□□ -1.18
RPN1-205ENST00000490166 MYO15BQ96JP2 1530 aa7.69□□□□□ -1.18
RPN1-205ENST00000490166 BICRAQ9NZM4 1560 aa7.68□□□□□ -1.18
RPN1-205ENST00000490166 CHADLQ6NUI6 762 aa7.68□□□□□ -1.18
RPN1-205ENST00000490166 PLEKHG5O94827 1062 aa7.66□□□□□ -1.18
RPN1-205ENST00000490166 CREBZFQ9NS37 354 aa7.66□□□□□ -1.18
RPN1-205ENST00000490166 DCAF1Q9Y4B6 1507 aa7.64□□□□□ -1.19
RPN1-205ENST00000490166 FARP1Q9Y4F1 1045 aaPredicted RBP7.64□□□□□ -1.19
RPN1-205ENST00000490166 MIER1Q8N108 512 aa7.63□□□□□ -1.19
RPN1-205ENST00000490166 CECR2Q9BXF3 1484 aa7.62□□□□□ -1.19
RPN1-205ENST00000490166 PLCD3Q8N3E9 789 aa7.61□□□□□ -1.19
RPN1-205ENST00000490166 CC2D2AQ9P2K1 1620 aa7.6□□□□□ -1.19
RPN1-205ENST00000490166 HAX1O00165 279 aa7.6□□□□□ -1.19
RPN1-205ENST00000490166 NPM1P06748 294 aaKnown RBP eCLIP7.59□□□□□ -1.19
RPN1-205ENST00000490166 SHROOM4Q9ULL8 1493 aa7.59□□□□□ -1.19
RPN1-205ENST00000490166 EIF4G1Q04637 1599 aaKnown RBP7.59□□□□□ -1.2
RPN1-205ENST00000490166 ZBTB47Q9UFB7 747 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms