RNA–Protein interactions for RNA: ENST00000306591.11

TMC6-201, Transcript of transmembrane channel like 6, humanhuman

TSL 5 BASIC

Gene TMC6, Length 1,681 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-201ENST00000306591 NISCHQ9Y2I1 1504 aa43.47■■■■■ 4.55
TMC6-201ENST00000306591 CCDC180Q9P1Z9 1646 aa38.26■■■■□ 3.72
TMC6-201ENST00000306591 ABCC9O60706 1549 aa37.48■■■■□ 3.59
TMC6-201ENST00000306591 ZCCHC6Q5VYS8 1495 aaKnown RBP36.58■■■■□ 3.45
TMC6-201ENST00000306591 DCAF8L2P0C7V8 631 aa36.29■■■■□ 3.4
TMC6-201ENST00000306591 DCAF1Q9Y4B6 1507 aa36.05■■■■□ 3.36
TMC6-201ENST00000306591 RB1CC1Q8TDY2 1594 aa35.99■■■■□ 3.35
TMC6-201ENST00000306591 NACADO15069 1562 aa35.97■■■■□ 3.35
TMC6-201ENST00000306591 MYO15BQ96JP2 1530 aa35.77■■■■□ 3.32
TMC6-201ENST00000306591 SHROOM4Q9ULL8 1493 aa35.55■■■■□ 3.28
TMC6-201ENST00000306591 UNC13AQ9UPW8 1703 aa35.17■■■■□ 3.22
TMC6-201ENST00000306591 PABPN1Q86U42 306 aaKnown RBP eCLIP35.13■■■■□ 3.214e-7■□□□□ 10.3
TMC6-201ENST00000306591 SCRIBQ14160 1630 aa35.09■■■■□ 3.21
TMC6-201ENST00000306591 BICRAQ9NZM4 1560 aa34.94■■■■□ 3.18
TMC6-201ENST00000306591 SUPT5HO00267 1087 aaKnown RBP34.47■■■■□ 3.11
TMC6-201ENST00000306591 DNAJC5BQ9UF47 199 aa34.31■■■■□ 3.08
TMC6-201ENST00000306591 EIF4G1Q04637 1599 aaKnown RBP34.01■■■■□ 3.03
TMC6-201ENST00000306591 RSF1Q96T23 1441 aaPredicted RBP33.84■■■■□ 3.01
TMC6-201ENST00000306591 CC2D2AQ9P2K1 1620 aa33.84■■■■□ 3.01
TMC6-201ENST00000306591 CECR2Q9BXF3 1484 aa33.77■■■■□ 3
TMC6-201ENST00000306591 BAZ1AQ9NRL2 1556 aaPredicted RBP33.56■■■□□ 2.96
TMC6-201ENST00000306591 MROH2BQ7Z745 1585 aa33.53■■■□□ 2.96
TMC6-201ENST00000306591 SMARCA4P51532 1647 aa33.51■■■□□ 2.96
TMC6-201ENST00000306591 ATAD2BQ9ULI0 1458 aa33.32■■■□□ 2.92
TMC6-201ENST00000306591 CHIC1Q5VXU3 224 aa33.27■■■□□ 2.92
TMC6-201ENST00000306591 WIZO95785 1651 aa33.26■■■□□ 2.92
TMC6-201ENST00000306591 NCAPD3P42695 1498 aa33.23■■■□□ 2.91
TMC6-201ENST00000306591 SMARCA2P51531 1590 aa33.23■■■□□ 2.91
TMC6-201ENST00000306591 PEG3Q9GZU2 1588 aa33.12■■■□□ 2.89
TMC6-201ENST00000306591 BAZ1BQ9UIG0 1483 aaKnown RBP33.06■■■□□ 2.88
TMC6-201ENST00000306591 HMGXB3Q12766 1538 aa33.05■■■□□ 2.88
TMC6-201ENST00000306591 TOP2AP11388 1531 aaKnown RBP33.01■■■□□ 2.87
TMC6-201ENST00000306591 CCDC88BA6NC98 1476 aa32.64■■■□□ 2.82
TMC6-201ENST00000306591 NESP48681 1621 aa32.5■■■□□ 2.79
TMC6-201ENST00000306591 TRIM41Q8WV44 630 aa32.48■■■□□ 2.79
TMC6-201ENST00000306591 CADPSQ9ULU8 1353 aa32.32■■■□□ 2.76
TMC6-201ENST00000306591 LAMC3Q9Y6N6 1575 aa32.3■■■□□ 2.76
TMC6-201ENST00000306591 ERCC6Q03468 1493 aa32.26■■■□□ 2.75
TMC6-201ENST00000306591 CFTRP13569 1480 aa32.14■■■□□ 2.74
TMC6-201ENST00000306591 PDS5BQ9NTI5 1447 aa32.13■■■□□ 2.73
TMC6-201ENST00000306591 KIF21AQ7Z4S6 1674 aa32.02■■■□□ 2.72
TMC6-201ENST00000306591 ABCC8Q09428 1581 aa32■■■□□ 2.71
TMC6-201ENST00000306591 FANCD2Q9BXW9 1451 aa31.96■■■□□ 2.71
TMC6-201ENST00000306591 LOC105371045A0A1W2PR82 267 aa31.92■■■□□ 2.7
TMC6-201ENST00000306591 CEP164Q9UPV0 1460 aa31.88■■■□□ 2.69
TMC6-201ENST00000306591 WRNQ14191 1432 aaPredicted RBP eCLIP31.87■■■□□ 2.69
TMC6-201ENST00000306591 THOC2Q8NI27 1593 aaKnown RBP31.85■■■□□ 2.69
TMC6-201ENST00000306591 MRC2Q9UBG0 1479 aa31.78■■■□□ 2.68
TMC6-201ENST00000306591 PRDM2Q13029 1718 aa31.78■■■□□ 2.68
TMC6-201ENST00000306591 FAM9AQ8IZU1 332 aaPredicted RBP31.76■■■□□ 2.67
TMC6-201ENST00000306591 CUX2O14529 1486 aa31.75■■■□□ 2.67
TMC6-201ENST00000306591 EEA1Q15075 1411 aa31.74■■■□□ 2.67
TMC6-201ENST00000306591 WDR62O43379 1518 aa31.65■■■□□ 2.66
TMC6-201ENST00000306591 SYNJ1O43426 1573 aa31.64■■■□□ 2.66
TMC6-201ENST00000306591 URB2Q14146 1524 aaKnown RBP31.64■■■□□ 2.65
TMC6-201ENST00000306591 TOP2BQ02880 1626 aa31.58■■■□□ 2.65
TMC6-201ENST00000306591 BIVM-ERCC5R4GMW8 1640 aa31.53■■■□□ 2.64
TMC6-201ENST00000306591 SOGA1O94964 1423 aa31.51■■■□□ 2.64
TMC6-201ENST00000306591 TOPBP1Q92547 1522 aa31.45■■■□□ 2.63
TMC6-201ENST00000306591 CSRNP3Q8WYN3 585 aa31.44■■■□□ 2.62
TMC6-201ENST00000306591 DNMBPQ6XZF7 1577 aa31.39■■■□□ 2.62
TMC6-201ENST00000306591 CUX1P39880 1505 aa31.34■■■□□ 2.61
TMC6-201ENST00000306591 RUSC2Q8N2Y8 1516 aa31.33■■■□□ 2.61
TMC6-201ENST00000306591 GOLGA3Q08378 1498 aa31.23■■■□□ 2.59
TMC6-201ENST00000306591 TNIKQ9UKE5 1360 aa31.23■■■□□ 2.59
TMC6-201ENST00000306591 KIF21BO75037 1637 aa31.22■■■□□ 2.59
TMC6-201ENST00000306591 POLA1P09884 1462 aaPredicted RBP31.21■■■□□ 2.59
TMC6-201ENST00000306591 EHMT2Q96KQ7 1210 aa31.19■■■□□ 2.58
TMC6-201ENST00000306591 IFT140Q96RY7 1462 aa31.18■■■□□ 2.58
TMC6-201ENST00000306591 FGD5Q6ZNL6 1462 aa31.18■■■□□ 2.58
TMC6-201ENST00000306591 RAD54L2Q9Y4B4 1467 aa31.14■■■□□ 2.57
TMC6-201ENST00000306591 ZNF608Q9ULD9 1512 aaPredicted RBP31.11■■■□□ 2.57
TMC6-201ENST00000306591 KIF27Q86VH2 1401 aa31.07■■■□□ 2.56
TMC6-201ENST00000306591 TARBP1Q13395 1621 aaKnown RBP31.06■■■□□ 2.56
TMC6-201ENST00000306591 UBTFP17480 764 aaKnown RBP31.03■■■□□ 2.56
TMC6-201ENST00000306591 CEP162Q5TB80 1403 aa31.02■■■□□ 2.56
TMC6-201ENST00000306591 AQRO60306 1485 aaKnown RBP eCLIP30.98■■■□□ 2.551e-9■■■■■ 34.8
TMC6-201ENST00000306591 TDRD9Q8NDG6 1382 aaKnown RBP30.97■■■□□ 2.55
TMC6-201ENST00000306591 ERICH3Q5RHP9 1530 aa30.96■■■□□ 2.55
TMC6-201ENST00000306591 TRIM26Q12899 539 aaPredicted RBP30.94■■■□□ 2.54
TMC6-201ENST00000306591 PRXQ9BXM0 1461 aa30.93■■■□□ 2.54
TMC6-201ENST00000306591 EIF4G3O43432 1585 aaKnown RBP30.93■■■□□ 2.54
TMC6-201ENST00000306591 PCGF6Q9BYE7 350 aa30.9■■■□□ 2.54
TMC6-201ENST00000306591 RAPGEF2Q9Y4G8 1499 aa30.87■■■□□ 2.53
TMC6-201ENST00000306591 ABCA10Q8WWZ4 1543 aa30.83■■■□□ 2.53
TMC6-201ENST00000306591 WDR97A6NE52 1622 aa30.81■■■□□ 2.52
TMC6-201ENST00000306591 GAPVD1Q14C86 1478 aa30.73■■■□□ 2.51
TMC6-201ENST00000306591 IGF1RP08069 1367 aa30.71■■■□□ 2.51
TMC6-201ENST00000306591 CLIP1P30622 1438 aa30.71■■■□□ 2.51
TMC6-201ENST00000306591 GRIN2BQ13224 1484 aa30.68■■■□□ 2.5
TMC6-201ENST00000306591 ABCA5Q8WWZ7 1642 aa30.68■■■□□ 2.5
TMC6-201ENST00000306591 DNAJC5Q9H3Z4 198 aa30.68■■■□□ 2.5
TMC6-201ENST00000306591 SNAPC4Q5SXM2 1469 aa30.66■■■□□ 2.5
TMC6-201ENST00000306591 FBLN2P98095 1184 aa30.65■■■□□ 2.5
TMC6-201ENST00000306591 PBRM1Q86U86 1689 aa30.59■■■□□ 2.49
TMC6-201ENST00000306591 OSCARQ8IYS5 282 aa30.58■■■□□ 2.49
TMC6-201ENST00000306591 CARMIL1Q5VZK9 1371 aa30.58■■■□□ 2.49
TMC6-201ENST00000306591 MAGI1Q96QZ7 1491 aaPredicted RBP30.54■■■□□ 2.48
TMC6-201ENST00000306591 VPS8Q8N3P4 1428 aa30.52■■■□□ 2.48
TMC6-201ENST00000306591 CHMP7Q8WUX9 453 aaPredicted RBP30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms