RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
EWSR1-217ENST00000483415 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.18
EWSR1-217ENST00000483415 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
EWSR1-217ENST00000483415 ZCCHC6Q5VYS8 1495 aaKnown RBP21.05■□□□□ 0.96
EWSR1-217ENST00000483415 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
EWSR1-217ENST00000483415 NACADO15069 1562 aa20.76■□□□□ 0.91
EWSR1-217ENST00000483415 ABCC9O60706 1549 aa20.65■□□□□ 0.9
EWSR1-217ENST00000483415 RB1CC1Q8TDY2 1594 aa20.57■□□□□ 0.88
EWSR1-217ENST00000483415 UNC13AQ9UPW8 1703 aa20.15■□□□□ 0.82
EWSR1-217ENST00000483415 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
EWSR1-217ENST00000483415 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
EWSR1-217ENST00000483415 DCAF8L2P0C7V8 631 aa19.87■□□□□ 0.77
EWSR1-217ENST00000483415 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
EWSR1-217ENST00000483415 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
EWSR1-217ENST00000483415 PEG3Q9GZU2 1588 aa19.38■□□□□ 0.69
EWSR1-217ENST00000483415 SMARCA4P51532 1647 aa19.37■□□□□ 0.69
EWSR1-217ENST00000483415 EIF4G1Q04637 1599 aaKnown RBP19.24■□□□□ 0.67
EWSR1-217ENST00000483415 SMARCA2P51531 1590 aa19.18■□□□□ 0.66
EWSR1-217ENST00000483415 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
EWSR1-217ENST00000483415 MROH2BQ7Z745 1585 aa19.16■□□□□ 0.66
EWSR1-217ENST00000483415 RSF1Q96T23 1441 aaPredicted RBP19.14■□□□□ 0.66
EWSR1-217ENST00000483415 PABPN1Q86U42 306 aaKnown RBP eCLIP19.14■□□□□ 0.65
EWSR1-217ENST00000483415 HMGXB3Q12766 1538 aa19.12■□□□□ 0.65
EWSR1-217ENST00000483415 TOP2AP11388 1531 aaKnown RBP19.04■□□□□ 0.64
EWSR1-217ENST00000483415 NCAPD3P42695 1498 aa19.02■□□□□ 0.64
EWSR1-217ENST00000483415 WIZO95785 1651 aa19.01■□□□□ 0.63
EWSR1-217ENST00000483415 ATAD2BQ9ULI0 1458 aa19■□□□□ 0.63
EWSR1-217ENST00000483415 CC2D2AQ9P2K1 1620 aa18.98■□□□□ 0.63
EWSR1-217ENST00000483415 BAZ1BQ9UIG0 1483 aaKnown RBP18.85■□□□□ 0.61
EWSR1-217ENST00000483415 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
EWSR1-217ENST00000483415 CCDC88BA6NC98 1476 aa18.59■□□□□ 0.57
EWSR1-217ENST00000483415 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
EWSR1-217ENST00000483415 SUPT5HO00267 1087 aaKnown RBP18.53■□□□□ 0.56
EWSR1-217ENST00000483415 CFTRP13569 1480 aa18.46■□□□□ 0.55
EWSR1-217ENST00000483415 CADPSQ9ULU8 1353 aa18.35■□□□□ 0.53
EWSR1-217ENST00000483415 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
EWSR1-217ENST00000483415 BIVM-ERCC5R4GMW8 1640 aa18.25■□□□□ 0.51
EWSR1-217ENST00000483415 ABCC8Q09428 1581 aa18.21■□□□□ 0.51
EWSR1-217ENST00000483415 PDS5BQ9NTI5 1447 aa18.19■□□□□ 0.5
EWSR1-217ENST00000483415 TOP2BQ02880 1626 aa18.15■□□□□ 0.5
EWSR1-217ENST00000483415 KIF21AQ7Z4S6 1674 aa18.15■□□□□ 0.5
EWSR1-217ENST00000483415 FANCD2Q9BXW9 1451 aa18.12■□□□□ 0.49
EWSR1-217ENST00000483415 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
EWSR1-217ENST00000483415 CEP164Q9UPV0 1460 aa18.1■□□□□ 0.49
EWSR1-217ENST00000483415 WDR97A6NE52 1622 aa18.08■□□□□ 0.48
EWSR1-217ENST00000483415 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
EWSR1-217ENST00000483415 WDR62O43379 1518 aa18.04■□□□□ 0.48
EWSR1-217ENST00000483415 NESP48681 1621 aa18.04■□□□□ 0.48
EWSR1-217ENST00000483415 WRNQ14191 1432 aaPredicted RBP eCLIP18.03■□□□□ 0.48
EWSR1-217ENST00000483415 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
EWSR1-217ENST00000483415 SYNJ1O43426 1573 aa18.01■□□□□ 0.47
EWSR1-217ENST00000483415 CUX1P39880 1505 aa17.99■□□□□ 0.47
EWSR1-217ENST00000483415 TOPBP1Q92547 1522 aa17.95■□□□□ 0.46
EWSR1-217ENST00000483415 URB2Q14146 1524 aaKnown RBP17.92■□□□□ 0.46
EWSR1-217ENST00000483415 EEA1Q15075 1411 aa17.9■□□□□ 0.46
EWSR1-217ENST00000483415 CHIC1Q5VXU3 224 aa17.89■□□□□ 0.45
EWSR1-217ENST00000483415 HRCP23327 699 aa17.86■□□□□ 0.45
EWSR1-217ENST00000483415 TARBP1Q13395 1621 aaKnown RBP17.83■□□□□ 0.45
EWSR1-217ENST00000483415 ERCC6Q03468 1493 aa17.83■□□□□ 0.45
EWSR1-217ENST00000483415 ABCA10Q8WWZ4 1543 aa17.82■□□□□ 0.44
EWSR1-217ENST00000483415 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
EWSR1-217ENST00000483415 CUX2O14529 1486 aa17.8■□□□□ 0.44
EWSR1-217ENST00000483415 POLA1P09884 1462 aaPredicted RBP17.79■□□□□ 0.44
EWSR1-217ENST00000483415 IFT140Q96RY7 1462 aa17.78■□□□□ 0.44
EWSR1-217ENST00000483415 ABCA5Q8WWZ7 1642 aa17.78■□□□□ 0.44
EWSR1-217ENST00000483415 PELP1Q8IZL8 1130 aaKnown RBP17.72■□□□□ 0.43
EWSR1-217ENST00000483415 CUL7Q14999 1698 aa17.71■□□□□ 0.43
EWSR1-217ENST00000483415 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
EWSR1-217ENST00000483415 ERICH3Q5RHP9 1530 aa17.69■□□□□ 0.42
EWSR1-217ENST00000483415 KIF21BO75037 1637 aa17.69■□□□□ 0.42
EWSR1-217ENST00000483415 PBRM1Q86U86 1689 aa17.68■□□□□ 0.42
EWSR1-217ENST00000483415 KIF27Q86VH2 1401 aa17.65■□□□□ 0.42
EWSR1-217ENST00000483415 SOGA1O94964 1423 aa17.64■□□□□ 0.42
EWSR1-217ENST00000483415 EIF4G3O43432 1585 aaKnown RBP17.58■□□□□ 0.41
EWSR1-217ENST00000483415 PRXQ9BXM0 1461 aa17.52■□□□□ 0.4
EWSR1-217ENST00000483415 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.4
EWSR1-217ENST00000483415 GAPVD1Q14C86 1478 aa17.52■□□□□ 0.4
EWSR1-217ENST00000483415 ADAMTS12P58397 1594 aa17.52■□□□□ 0.4
EWSR1-217ENST00000483415 GRIN2BQ13224 1484 aa17.52■□□□□ 0.39
EWSR1-217ENST00000483415 MAGI1Q96QZ7 1491 aaPredicted RBP17.51■□□□□ 0.39
EWSR1-217ENST00000483415 CTTNBP2Q8WZ74 1663 aa17.44■□□□□ 0.38
EWSR1-217ENST00000483415 GOLGA3Q08378 1498 aa17.44■□□□□ 0.38
EWSR1-217ENST00000483415 IGF1RP08069 1367 aa17.42■□□□□ 0.38
EWSR1-217ENST00000483415 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
EWSR1-217ENST00000483415 RUSC2Q8N2Y8 1516 aa17.41■□□□□ 0.38
EWSR1-217ENST00000483415 RAPGEF2Q9Y4G8 1499 aa17.4■□□□□ 0.38
EWSR1-217ENST00000483415 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
EWSR1-217ENST00000483415 ZNF608Q9ULD9 1512 aaPredicted RBP17.38■□□□□ 0.37
EWSR1-217ENST00000483415 PPARGC1BQ86YN6 1023 aaKnown RBP17.38■□□□□ 0.37
EWSR1-217ENST00000483415 SYNJ2O15056 1496 aa17.35■□□□□ 0.37
EWSR1-217ENST00000483415 CARMIL1Q5VZK9 1371 aa17.32■□□□□ 0.36
EWSR1-217ENST00000483415 TNIKQ9UKE5 1360 aa17.31■□□□□ 0.36
EWSR1-217ENST00000483415 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
EWSR1-217ENST00000483415 AQRO60306 1485 aaKnown RBP eCLIP17.3■□□□□ 0.362e-7■■■■□ 21.3
EWSR1-217ENST00000483415 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
EWSR1-217ENST00000483415 CHD1O14646 1710 aa17.28■□□□□ 0.36
EWSR1-217ENST00000483415 GRIN2AQ12879 1464 aa17.27■□□□□ 0.36
EWSR1-217ENST00000483415 EFCAB5A4FU69 1503 aa17.26■□□□□ 0.35
EWSR1-217ENST00000483415 NUP160Q12769 1436 aa17.25■□□□□ 0.35
EWSR1-217ENST00000483415 SHROOM2Q13796 1616 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms