RNA–Protein interactions for RNA: ENST00000563048.5

USP10-207, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 2

Gene USP10, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-207ENST00000563048 NISCHQ9Y2I1 1504 aa30.06■■■□□ 2.4
USP10-207ENST00000563048 CCDC180Q9P1Z9 1646 aa26.95■■□□□ 1.9
USP10-207ENST00000563048 ABCC9O60706 1549 aa26.94■■□□□ 1.9
USP10-207ENST00000563048 RB1CC1Q8TDY2 1594 aa25.58■■□□□ 1.69
USP10-207ENST00000563048 NACADO15069 1562 aa25.39■■□□□ 1.66
USP10-207ENST00000563048 DCAF8L2P0C7V8 631 aa25.35■■□□□ 1.65
USP10-207ENST00000563048 DNAJC5BQ9UF47 199 aa25.27■■□□□ 1.64
USP10-207ENST00000563048 UNC13AQ9UPW8 1703 aa25.25■■□□□ 1.63
USP10-207ENST00000563048 PABPN1Q86U42 306 aaKnown RBP eCLIP25.1■■□□□ 1.61
USP10-207ENST00000563048 MYO15BQ96JP2 1530 aa25■■□□□ 1.59
USP10-207ENST00000563048 BICRAQ9NZM4 1560 aa24.96■■□□□ 1.59
USP10-207ENST00000563048 ZCCHC6Q5VYS8 1495 aaKnown RBP24.94■■□□□ 1.58
USP10-207ENST00000563048 DCAF1Q9Y4B6 1507 aa24.76■■□□□ 1.55
USP10-207ENST00000563048 SCRIBQ14160 1630 aa24.65■■□□□ 1.54
USP10-207ENST00000563048 SHROOM4Q9ULL8 1493 aa24.39■■□□□ 1.49
USP10-207ENST00000563048 CC2D2AQ9P2K1 1620 aa24.35■■□□□ 1.49
USP10-207ENST00000563048 EIF4G1Q04637 1599 aaKnown RBP24.27■■□□□ 1.48
USP10-207ENST00000563048 CECR2Q9BXF3 1484 aa24.2■■□□□ 1.46
USP10-207ENST00000563048 AEBP2Q6ZN18 517 aaPredicted RBP23.96■■□□□ 1.43
USP10-207ENST00000563048 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
USP10-207ENST00000563048 NCAPD3P42695 1498 aa23.44■■□□□ 1.34
USP10-207ENST00000563048 ATAD2BQ9ULI0 1458 aa23.44■■□□□ 1.34
USP10-207ENST00000563048 SMARCA2P51531 1590 aa23.32■■□□□ 1.32
USP10-207ENST00000563048 HMGXB3Q12766 1538 aa23.3■■□□□ 1.32
USP10-207ENST00000563048 BAZ1AQ9NRL2 1556 aaPredicted RBP23.28■■□□□ 1.32
USP10-207ENST00000563048 MROH2BQ7Z745 1585 aa23.24■■□□□ 1.31
USP10-207ENST00000563048 NESP48681 1621 aa23.22■■□□□ 1.31
USP10-207ENST00000563048 BAZ1BQ9UIG0 1483 aaKnown RBP23.19■■□□□ 1.3
USP10-207ENST00000563048 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
USP10-207ENST00000563048 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
USP10-207ENST00000563048 CUX2O14529 1486 aa23.07■■□□□ 1.28
USP10-207ENST00000563048 WIZO95785 1651 aa23.01■■□□□ 1.27
USP10-207ENST00000563048 DNAJC5Q9H3Z4 198 aa23■■□□□ 1.27
USP10-207ENST00000563048 KIF21AQ7Z4S6 1674 aa22.96■■□□□ 1.27
USP10-207ENST00000563048 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
USP10-207ENST00000563048 LAMC3Q9Y6N6 1575 aa22.93■■□□□ 1.26
USP10-207ENST00000563048 CADPSQ9ULU8 1353 aa22.74■■□□□ 1.23
USP10-207ENST00000563048 PDS5BQ9NTI5 1447 aa22.73■■□□□ 1.23
USP10-207ENST00000563048 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
USP10-207ENST00000563048 TOP2AP11388 1531 aaKnown RBP22.61■■□□□ 1.21
USP10-207ENST00000563048 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
USP10-207ENST00000563048 WDR62O43379 1518 aa22.56■■□□□ 1.2
USP10-207ENST00000563048 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
USP10-207ENST00000563048 CEP164Q9UPV0 1460 aa22.52■■□□□ 1.2
USP10-207ENST00000563048 CFTRP13569 1480 aa22.51■■□□□ 1.19
USP10-207ENST00000563048 PRDM2Q13029 1718 aa22.43■■□□□ 1.18
USP10-207ENST00000563048 URB2Q14146 1524 aaKnown RBP22.4■■□□□ 1.18
USP10-207ENST00000563048 CCDC88BA6NC98 1476 aa22.38■■□□□ 1.17
USP10-207ENST00000563048 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
USP10-207ENST00000563048 TOPBP1Q92547 1522 aa22.13■■□□□ 1.13
USP10-207ENST00000563048 ZNF608Q9ULD9 1512 aaPredicted RBP22.12■■□□□ 1.13
USP10-207ENST00000563048 TRIM41Q8WV44 630 aa22.1■■□□□ 1.13
USP10-207ENST00000563048 IFT140Q96RY7 1462 aa22.04■■□□□ 1.12
USP10-207ENST00000563048 DNMBPQ6XZF7 1577 aa22.04■■□□□ 1.12
USP10-207ENST00000563048 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
USP10-207ENST00000563048 EIF4G3O43432 1585 aaKnown RBP22■■□□□ 1.11
USP10-207ENST00000563048 TARBP1Q13395 1621 aaKnown RBP21.97■■□□□ 1.11
USP10-207ENST00000563048 ABCC8Q09428 1581 aa21.94■■□□□ 1.1
USP10-207ENST00000563048 AQRO60306 1485 aaKnown RBP eCLIP21.91■■□□□ 1.19e-7■■■■■ 27.8
USP10-207ENST00000563048 POLA1P09884 1462 aaPredicted RBP21.91■■□□□ 1.1
USP10-207ENST00000563048 CHD1O14646 1710 aa21.9■■□□□ 1.1
USP10-207ENST00000563048 RAD54L2Q9Y4B4 1467 aa21.88■■□□□ 1.09
USP10-207ENST00000563048 RIMBP3CA6NJZ7 1639 aa21.87■■□□□ 1.09
USP10-207ENST00000563048 RIMBP3BA6NNM3 1639 aa21.87■■□□□ 1.09
USP10-207ENST00000563048 RIMBP3Q9UFD9 1639 aa21.87■■□□□ 1.09
USP10-207ENST00000563048 CUX1P39880 1505 aa21.82■■□□□ 1.08
USP10-207ENST00000563048 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
USP10-207ENST00000563048 FGD5Q6ZNL6 1462 aa21.78■■□□□ 1.08
USP10-207ENST00000563048 SOGA1O94964 1423 aa21.77■■□□□ 1.07
USP10-207ENST00000563048 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
USP10-207ENST00000563048 ARHGEF11O15085 1522 aa21.76■■□□□ 1.07
USP10-207ENST00000563048 WDR97A6NE52 1622 aa21.7■■□□□ 1.06
USP10-207ENST00000563048 FBLN2P98095 1184 aa21.69■■□□□ 1.06
USP10-207ENST00000563048 SNAPC4Q5SXM2 1469 aa21.67■■□□□ 1.06
USP10-207ENST00000563048 PBRM1Q86U86 1689 aa21.62■■□□□ 1.05
USP10-207ENST00000563048 ARAP1Q96P48 1450 aa21.58■■□□□ 1.04
USP10-207ENST00000563048 CYB5RLQ6IPT4 315 aa21.56■■□□□ 1.04
USP10-207ENST00000563048 GRIN2BQ13224 1484 aa21.55■■□□□ 1.04
USP10-207ENST00000563048 CLASP1Q7Z460 1538 aa21.54■■□□□ 1.04
USP10-207ENST00000563048 MAGI1Q96QZ7 1491 aaPredicted RBP21.54■■□□□ 1.04
USP10-207ENST00000563048 ABCA5Q8WWZ7 1642 aa21.53■■□□□ 1.04
USP10-207ENST00000563048 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
USP10-207ENST00000563048 ABCA10Q8WWZ4 1543 aa21.5■■□□□ 1.03
USP10-207ENST00000563048 SYNJ1O43426 1573 aa21.49■■□□□ 1.03
USP10-207ENST00000563048 CHMP7Q8WUX9 453 aaPredicted RBP21.49■■□□□ 1.03
USP10-207ENST00000563048 BIVM-ERCC5R4GMW8 1640 aa21.48■■□□□ 1.03
USP10-207ENST00000563048 SYNJ2O15056 1496 aa21.48■■□□□ 1.03
USP10-207ENST00000563048 TOP2BQ02880 1626 aa21.44■■□□□ 1.02
USP10-207ENST00000563048 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.01
USP10-207ENST00000563048 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
USP10-207ENST00000563048 ERCC6L2Q5T890 1561 aa21.32■■□□□ 1
USP10-207ENST00000563048 GRIN2AQ12879 1464 aa21.31■■□□□ 1
USP10-207ENST00000563048 CEP170Q5SW79 1584 aa21.31■■□□□ 1
USP10-207ENST00000563048 TRHP20396 242 aaPredicted RBP21.28■■□□□ 1
USP10-207ENST00000563048 NUP160Q12769 1436 aa21.22■□□□□ 0.99
USP10-207ENST00000563048 ERICH3Q5RHP9 1530 aa21.22■□□□□ 0.99
USP10-207ENST00000563048 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
USP10-207ENST00000563048 SHROOM2Q13796 1616 aa21.18■□□□□ 0.98
USP10-207ENST00000563048 RUSC2Q8N2Y8 1516 aa21.05■□□□□ 0.96
USP10-207ENST00000563048 PRG4Q92954 1404 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms