RNA–Protein interactions for RNA: ENST00000397722.5

NME4-203, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 2 BASIC

Gene NME4, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-203ENST00000397722 NISCHQ9Y2I1 1504 aa33.57■■■□□ 2.96
NME4-203ENST00000397722 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
NME4-203ENST00000397722 ABCC9O60706 1549 aa30■■■□□ 2.39
NME4-203ENST00000397722 RB1CC1Q8TDY2 1594 aa28.61■■■□□ 2.17
NME4-203ENST00000397722 NACADO15069 1562 aa28.43■■■□□ 2.14
NME4-203ENST00000397722 DCAF8L2P0C7V8 631 aa28.25■■■□□ 2.11
NME4-203ENST00000397722 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.08
NME4-203ENST00000397722 DNAJC5BQ9UF47 199 aa28.02■■■□□ 2.08
NME4-203ENST00000397722 UNC13AQ9UPW8 1703 aa27.93■■■□□ 2.06
NME4-203ENST00000397722 PABPN1Q86U42 306 aaKnown RBP eCLIP27.92■■■□□ 2.061e-8■■□□□ 14.2
NME4-203ENST00000397722 ZCCHC6Q5VYS8 1495 aaKnown RBP27.86■■■□□ 2.05
NME4-203ENST00000397722 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
NME4-203ENST00000397722 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
NME4-203ENST00000397722 SCRIBQ14160 1630 aa27.43■■□□□ 1.98
NME4-203ENST00000397722 SHROOM4Q9ULL8 1493 aa27.43■■□□□ 1.98
NME4-203ENST00000397722 CC2D2AQ9P2K1 1620 aa27.11■■□□□ 1.93
NME4-203ENST00000397722 EIF4G1Q04637 1599 aaKnown RBP27.09■■□□□ 1.93
NME4-203ENST00000397722 CECR2Q9BXF3 1484 aa27.01■■□□□ 1.91
NME4-203ENST00000397722 NCAPD3P42695 1498 aa26.23■■□□□ 1.79
NME4-203ENST00000397722 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
NME4-203ENST00000397722 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
NME4-203ENST00000397722 SMARCA2P51531 1590 aa26.11■■□□□ 1.77
NME4-203ENST00000397722 HMGXB3Q12766 1538 aa26.07■■□□□ 1.76
NME4-203ENST00000397722 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
NME4-203ENST00000397722 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
NME4-203ENST00000397722 PEG3Q9GZU2 1588 aa25.93■■□□□ 1.74
NME4-203ENST00000397722 ERCC6Q03468 1493 aa25.9■■□□□ 1.74
NME4-203ENST00000397722 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
NME4-203ENST00000397722 CUX2O14529 1486 aa25.83■■□□□ 1.73
NME4-203ENST00000397722 NESP48681 1621 aa25.79■■□□□ 1.72
NME4-203ENST00000397722 DNAJC5Q9H3Z4 198 aa25.68■■□□□ 1.7
NME4-203ENST00000397722 LAMC3Q9Y6N6 1575 aa25.65■■□□□ 1.7
NME4-203ENST00000397722 WIZO95785 1651 aa25.56■■□□□ 1.68
NME4-203ENST00000397722 THOC2Q8NI27 1593 aaKnown RBP25.53■■□□□ 1.68
NME4-203ENST00000397722 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
NME4-203ENST00000397722 KIF21AQ7Z4S6 1674 aa25.47■■□□□ 1.67
NME4-203ENST00000397722 RSF1Q96T23 1441 aaPredicted RBP25.45■■□□□ 1.66
NME4-203ENST00000397722 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
NME4-203ENST00000397722 MRC2Q9UBG0 1479 aa25.27■■□□□ 1.64
NME4-203ENST00000397722 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
NME4-203ENST00000397722 WDR62O43379 1518 aa25.21■■□□□ 1.63
NME4-203ENST00000397722 CEP164Q9UPV0 1460 aa25.19■■□□□ 1.62
NME4-203ENST00000397722 CFTRP13569 1480 aa25.18■■□□□ 1.62
NME4-203ENST00000397722 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
NME4-203ENST00000397722 SUPT5HO00267 1087 aaKnown RBP25.02■■□□□ 1.6
NME4-203ENST00000397722 URB2Q14146 1524 aaKnown RBP24.95■■□□□ 1.58
NME4-203ENST00000397722 CCDC88BA6NC98 1476 aa24.95■■□□□ 1.58
NME4-203ENST00000397722 PRDM2Q13029 1718 aa24.92■■□□□ 1.58
NME4-203ENST00000397722 TOPBP1Q92547 1522 aa24.69■■□□□ 1.54
NME4-203ENST00000397722 IFT140Q96RY7 1462 aa24.67■■□□□ 1.54
NME4-203ENST00000397722 ABCC8Q09428 1581 aa24.64■■□□□ 1.54
NME4-203ENST00000397722 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
NME4-203ENST00000397722 ZNF608Q9ULD9 1512 aaPredicted RBP24.62■■□□□ 1.53
NME4-203ENST00000397722 DNMBPQ6XZF7 1577 aa24.62■■□□□ 1.53
NME4-203ENST00000397722 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
NME4-203ENST00000397722 EIF4G3O43432 1585 aaKnown RBP24.51■■□□□ 1.51
NME4-203ENST00000397722 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
NME4-203ENST00000397722 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.51
NME4-203ENST00000397722 AQRO60306 1485 aaKnown RBP eCLIP24.39■■□□□ 1.52e-7■■■■■ 32.9
NME4-203ENST00000397722 RAD54L2Q9Y4B4 1467 aa24.34■■□□□ 1.49
NME4-203ENST00000397722 SOGA1O94964 1423 aa24.33■■□□□ 1.49
NME4-203ENST00000397722 RIMBP3CA6NJZ7 1639 aa24.32■■□□□ 1.48
NME4-203ENST00000397722 RIMBP3BA6NNM3 1639 aa24.32■■□□□ 1.48
NME4-203ENST00000397722 RIMBP3Q9UFD9 1639 aa24.32■■□□□ 1.48
NME4-203ENST00000397722 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
NME4-203ENST00000397722 CUX1P39880 1505 aa24.3■■□□□ 1.48
NME4-203ENST00000397722 CHD1O14646 1710 aa24.29■■□□□ 1.48
NME4-203ENST00000397722 ARHGEF11O15085 1522 aa24.27■■□□□ 1.48
NME4-203ENST00000397722 TDRD9Q8NDG6 1382 aaKnown RBP24.27■■□□□ 1.48
NME4-203ENST00000397722 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
NME4-203ENST00000397722 FBLN2P98095 1184 aa24.21■■□□□ 1.47
NME4-203ENST00000397722 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
NME4-203ENST00000397722 GRIN2BQ13224 1484 aa24.12■■□□□ 1.45
NME4-203ENST00000397722 MAGI1Q96QZ7 1491 aaPredicted RBP24.12■■□□□ 1.45
NME4-203ENST00000397722 CYB5RLQ6IPT4 315 aa24.05■■□□□ 1.44
NME4-203ENST00000397722 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
NME4-203ENST00000397722 GAPVD1Q14C86 1478 aa24.04■■□□□ 1.44
NME4-203ENST00000397722 ABCA10Q8WWZ4 1543 aa24.04■■□□□ 1.44
NME4-203ENST00000397722 PBRM1Q86U86 1689 aa24.03■■□□□ 1.44
NME4-203ENST00000397722 SYNJ2O15056 1496 aa24.03■■□□□ 1.44
NME4-203ENST00000397722 ARAP1Q96P48 1450 aa24.03■■□□□ 1.44
NME4-203ENST00000397722 CLASP1Q7Z460 1538 aa24.03■■□□□ 1.44
NME4-203ENST00000397722 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
NME4-203ENST00000397722 ABCA5Q8WWZ7 1642 aa24.01■■□□□ 1.43
NME4-203ENST00000397722 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.422e-6■■■□□ 15
NME4-203ENST00000397722 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.42
NME4-203ENST00000397722 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
NME4-203ENST00000397722 ADAMTS12P58397 1594 aa23.82■■□□□ 1.4
NME4-203ENST00000397722 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
NME4-203ENST00000397722 TRHP20396 242 aaPredicted RBP23.75■■□□□ 1.39
NME4-203ENST00000397722 FHAD1B1AJZ9 1412 aa23.75■■□□□ 1.39
NME4-203ENST00000397722 ERICH3Q5RHP9 1530 aa23.74■■□□□ 1.39
NME4-203ENST00000397722 NUP160Q12769 1436 aa23.73■■□□□ 1.39
NME4-203ENST00000397722 CEP170Q5SW79 1584 aa23.73■■□□□ 1.39
NME4-203ENST00000397722 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
NME4-203ENST00000397722 ERCC6L2Q5T890 1561 aa23.65■■□□□ 1.38
NME4-203ENST00000397722 SHROOM2Q13796 1616 aa23.62■■□□□ 1.37
NME4-203ENST00000397722 RUSC2Q8N2Y8 1516 aa23.5■■□□□ 1.35
NME4-203ENST00000397722 PRG4Q92954 1404 aaPredicted RBP23.48■■□□□ 1.35
NME4-203ENST00000397722 KIF27Q86VH2 1401 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms