RNA–Protein interactions for RNA: ENST00000444498.5

NME4-205, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 3

Gene NME4, Length 1,111 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-205ENST00000444498 NISCHQ9Y2I1 1504 aa45.98■■■■■ 4.95
NME4-205ENST00000444498 CCDC180Q9P1Z9 1646 aa40.96■■■■■ 4.15
NME4-205ENST00000444498 ABCC9O60706 1549 aa40.36■■■■■ 4.05
NME4-205ENST00000444498 RB1CC1Q8TDY2 1594 aa38.7■■■■□ 3.79
NME4-205ENST00000444498 NACADO15069 1562 aa38.61■■■■□ 3.77
NME4-205ENST00000444498 DCAF8L2P0C7V8 631 aa38.51■■■■□ 3.76
NME4-205ENST00000444498 MYO15BQ96JP2 1530 aa38.33■■■■□ 3.73
NME4-205ENST00000444498 ZCCHC6Q5VYS8 1495 aaKnown RBP38.25■■■■□ 3.71
NME4-205ENST00000444498 DCAF1Q9Y4B6 1507 aa38.05■■■■□ 3.68
NME4-205ENST00000444498 UNC13AQ9UPW8 1703 aa37.75■■■■□ 3.63
NME4-205ENST00000444498 PABPN1Q86U42 306 aaKnown RBP eCLIP37.69■■■■□ 3.621e-8■■□□□ 14.2
NME4-205ENST00000444498 BICRAQ9NZM4 1560 aa37.55■■■■□ 3.6
NME4-205ENST00000444498 SCRIBQ14160 1630 aa37.35■■■■□ 3.57
NME4-205ENST00000444498 DNAJC5BQ9UF47 199 aa37.33■■■■□ 3.57
NME4-205ENST00000444498 SHROOM4Q9ULL8 1493 aa37.17■■■■□ 3.54
NME4-205ENST00000444498 EIF4G1Q04637 1599 aaKnown RBP36.57■■■■□ 3.45
NME4-205ENST00000444498 CC2D2AQ9P2K1 1620 aa36.49■■■■□ 3.43
NME4-205ENST00000444498 CECR2Q9BXF3 1484 aa36.31■■■■□ 3.4
NME4-205ENST00000444498 SMARCA4P51532 1647 aa35.71■■■■□ 3.31
NME4-205ENST00000444498 NCAPD3P42695 1498 aa35.66■■■■□ 3.3
NME4-205ENST00000444498 BAZ1AQ9NRL2 1556 aaPredicted RBP35.65■■■■□ 3.3
NME4-205ENST00000444498 ATAD2BQ9ULI0 1458 aa35.62■■■■□ 3.29
NME4-205ENST00000444498 SMARCA2P51531 1590 aa35.55■■■■□ 3.28
NME4-205ENST00000444498 HMGXB3Q12766 1538 aa35.43■■■■□ 3.26
NME4-205ENST00000444498 MROH2BQ7Z745 1585 aa35.42■■■■□ 3.26
NME4-205ENST00000444498 PEG3Q9GZU2 1588 aa35.39■■■■□ 3.26
NME4-205ENST00000444498 BAZ1BQ9UIG0 1483 aaKnown RBP35.3■■■■□ 3.24
NME4-205ENST00000444498 WIZO95785 1651 aa34.99■■■■□ 3.19
NME4-205ENST00000444498 RSF1Q96T23 1441 aaPredicted RBP34.94■■■■□ 3.18
NME4-205ENST00000444498 NESP48681 1621 aa34.84■■■■□ 3.17
NME4-205ENST00000444498 ERCC6Q03468 1493 aa34.82■■■■□ 3.16
NME4-205ENST00000444498 LAMC3Q9Y6N6 1575 aa34.72■■■■□ 3.15
NME4-205ENST00000444498 TOP2AP11388 1531 aaKnown RBP34.64■■■■□ 3.14
NME4-205ENST00000444498 CADPSQ9ULU8 1353 aa34.61■■■■□ 3.13
NME4-205ENST00000444498 CUX2O14529 1486 aa34.57■■■■□ 3.12
NME4-205ENST00000444498 PDS5BQ9NTI5 1447 aa34.53■■■■□ 3.12
NME4-205ENST00000444498 KIF21AQ7Z4S6 1674 aa34.38■■■■□ 3.09
NME4-205ENST00000444498 THOC2Q8NI27 1593 aaKnown RBP34.36■■■■□ 3.09
NME4-205ENST00000444498 CFTRP13569 1480 aa34.34■■■■□ 3.09
NME4-205ENST00000444498 CCDC88BA6NC98 1476 aa34.25■■■■□ 3.07
NME4-205ENST00000444498 FANCD2Q9BXW9 1451 aa34.19■■■■□ 3.06
NME4-205ENST00000444498 MRC2Q9UBG0 1479 aa34.18■■■■□ 3.06
NME4-205ENST00000444498 CEP164Q9UPV0 1460 aa34.16■■■■□ 3.06
NME4-205ENST00000444498 WDR62O43379 1518 aa34.07■■■■□ 3.04
NME4-205ENST00000444498 PRDM2Q13029 1718 aa33.96■■■■□ 3.03
NME4-205ENST00000444498 URB2Q14146 1524 aaKnown RBP33.85■■■■□ 3.01
NME4-205ENST00000444498 DNAJC5Q9H3Z4 198 aa33.85■■■■□ 3.01
NME4-205ENST00000444498 SUPT5HO00267 1087 aaKnown RBP33.83■■■■□ 3.01
NME4-205ENST00000444498 TOPBP1Q92547 1522 aa33.61■■■□□ 2.97
NME4-205ENST00000444498 ABCC8Q09428 1581 aa33.6■■■□□ 2.97
NME4-205ENST00000444498 DNMBPQ6XZF7 1577 aa33.53■■■□□ 2.96
NME4-205ENST00000444498 IFT140Q96RY7 1462 aa33.47■■■□□ 2.95
NME4-205ENST00000444498 ZNF608Q9ULD9 1512 aaPredicted RBP33.33■■■□□ 2.93
NME4-205ENST00000444498 POLA1P09884 1462 aaPredicted RBP33.31■■■□□ 2.92
NME4-205ENST00000444498 CUX1P39880 1505 aa33.25■■■□□ 2.91
NME4-205ENST00000444498 TARBP1Q13395 1621 aaKnown RBP33.24■■■□□ 2.91
NME4-205ENST00000444498 SOGA1O94964 1423 aa33.18■■■□□ 2.9
NME4-205ENST00000444498 FGD5Q6ZNL6 1462 aa33.18■■■□□ 2.9
NME4-205ENST00000444498 RAD54L2Q9Y4B4 1467 aa33.16■■■□□ 2.9
NME4-205ENST00000444498 EIF4G3O43432 1585 aaKnown RBP33.16■■■□□ 2.9
NME4-205ENST00000444498 AQRO60306 1485 aaKnown RBP eCLIP33.12■■■□□ 2.894e-7■■■■■ 35.6
NME4-205ENST00000444498 OSCARQ8IYS5 282 aa33.11■■■□□ 2.89
NME4-205ENST00000444498 TDRD9Q8NDG6 1382 aaKnown RBP33.02■■■□□ 2.88
NME4-205ENST00000444498 WDR97A6NE52 1622 aa32.98■■■□□ 2.87
NME4-205ENST00000444498 WRNQ14191 1432 aaPredicted RBP eCLIP32.94■■■□□ 2.862e-6■■■□□ 15
NME4-205ENST00000444498 TOP2BQ02880 1626 aa32.88■■■□□ 2.85
NME4-205ENST00000444498 ABCA10Q8WWZ4 1543 aa32.87■■■□□ 2.85
NME4-205ENST00000444498 BIVM-ERCC5R4GMW8 1640 aa32.86■■■□□ 2.85
NME4-205ENST00000444498 SYNJ1O43426 1573 aa32.85■■■□□ 2.85
NME4-205ENST00000444498 GRIN2BQ13224 1484 aa32.82■■■□□ 2.84
NME4-205ENST00000444498 GAPVD1Q14C86 1478 aa32.79■■■□□ 2.84
NME4-205ENST00000444498 SNAPC4Q5SXM2 1469 aa32.79■■■□□ 2.84
NME4-205ENST00000444498 MAGI1Q96QZ7 1491 aaPredicted RBP32.76■■■□□ 2.84
NME4-205ENST00000444498 FBLN2P98095 1184 aa32.76■■■□□ 2.83
NME4-205ENST00000444498 CHD1O14646 1710 aa32.76■■■□□ 2.83
NME4-205ENST00000444498 ABCA5Q8WWZ7 1642 aa32.73■■■□□ 2.83
NME4-205ENST00000444498 PBRM1Q86U86 1689 aa32.66■■■□□ 2.82
NME4-205ENST00000444498 CHMP7Q8WUX9 453 aaPredicted RBP32.65■■■□□ 2.82
NME4-205ENST00000444498 SYNJ2O15056 1496 aa32.63■■■□□ 2.81
NME4-205ENST00000444498 TRIM41Q8WV44 630 aa32.57■■■□□ 2.8
NME4-205ENST00000444498 RIMBP3CA6NJZ7 1639 aa32.54■■■□□ 2.8
NME4-205ENST00000444498 RIMBP3BA6NNM3 1639 aa32.54■■■□□ 2.8
NME4-205ENST00000444498 RIMBP3Q9UFD9 1639 aa32.54■■■□□ 2.8
NME4-205ENST00000444498 ARHGEF11O15085 1522 aa32.53■■■□□ 2.8
NME4-205ENST00000444498 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
NME4-205ENST00000444498 CLASP1Q7Z460 1538 aa32.46■■■□□ 2.79
NME4-205ENST00000444498 ADAMTS12P58397 1594 aa32.43■■■□□ 2.78
NME4-205ENST00000444498 FHAD1B1AJZ9 1412 aa32.41■■■□□ 2.78
NME4-205ENST00000444498 GRIN2AQ12879 1464 aa32.39■■■□□ 2.78
NME4-205ENST00000444498 KIF27Q86VH2 1401 aa32.29■■■□□ 2.76
NME4-205ENST00000444498 NUP160Q12769 1436 aa32.27■■■□□ 2.76
NME4-205ENST00000444498 CYB5RLQ6IPT4 315 aa32.27■■■□□ 2.76
NME4-205ENST00000444498 ARAP1Q96P48 1450 aa32.26■■■□□ 2.75
NME4-205ENST00000444498 CEP170Q5SW79 1584 aa32.22■■■□□ 2.75
NME4-205ENST00000444498 IGF1RP08069 1367 aa32.21■■■□□ 2.75
NME4-205ENST00000444498 CUL7Q14999 1698 aa32.08■■■□□ 2.73
NME4-205ENST00000444498 SHROOM2Q13796 1616 aa32.03■■■□□ 2.72
NME4-205ENST00000444498 CARMIL1Q5VZK9 1371 aa32■■■□□ 2.71
NME4-205ENST00000444498 ERCC6L2Q5T890 1561 aa31.98■■■□□ 2.71
NME4-205ENST00000444498 JPH4Q96JJ6 628 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms