RNA–Protein interactions for RNA: ENST00000515435.5

CSNK1A1-205, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5 BASIC

Gene CSNK1A1, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-205ENST00000515435 AEBP2Q6ZN18 517 aaPredicted RBP20.91■□□□□ 0.94
CSNK1A1-205ENST00000515435 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
CSNK1A1-205ENST00000515435 PHF23Q9BUL5 403 aaPredicted RBP18.26■□□□□ 0.51
CSNK1A1-205ENST00000515435 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
CSNK1A1-205ENST00000515435 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
CSNK1A1-205ENST00000515435 FOXD1Q16676 465 aa16.35■□□□□ 0.21
CSNK1A1-205ENST00000515435 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
CSNK1A1-205ENST00000515435 ADRA2BP18089 450 aa16.02■□□□□ 0.16
CSNK1A1-205ENST00000515435 PIAS4Q8N2W9 510 aaPredicted RBP15.46■□□□□ 0.07
CSNK1A1-205ENST00000515435 KCNA4P22459 653 aa15.01□□□□□ -0.01
CSNK1A1-205ENST00000515435 PPP4R3CPQ6ZMV5 832 aa14.93□□□□□ -0.02
CSNK1A1-205ENST00000515435 MSH5O43196 834 aa14.82□□□□□ -0.04
CSNK1A1-205ENST00000515435 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.08
CSNK1A1-205ENST00000515435 SCAF1Q9H7N4 1312 aaKnown RBP14.47□□□□□ -0.09
CSNK1A1-205ENST00000515435 MAPK8IP2Q13387 824 aaPredicted RBP14.47□□□□□ -0.09
CSNK1A1-205ENST00000515435 NPM3O75607 178 aaKnown RBP14.45□□□□□ -0.1
CSNK1A1-205ENST00000515435 CNKSR2Q8WXI2 1034 aa14.4□□□□□ -0.1
CSNK1A1-205ENST00000515435 EHMT2Q96KQ7 1210 aa14.34□□□□□ -0.11
CSNK1A1-205ENST00000515435 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
CSNK1A1-205ENST00000515435 DMRT2Q9Y5R5 561 aa14.08□□□□□ -0.16
CSNK1A1-205ENST00000515435 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
CSNK1A1-205ENST00000515435 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
CSNK1A1-205ENST00000515435 HOXD11P31277 338 aaPredicted RBP13.91□□□□□ -0.18
CSNK1A1-205ENST00000515435 ZBTB22O15209 634 aa13.87□□□□□ -0.19
CSNK1A1-205ENST00000515435 DNAJC5BQ9UF47 199 aa13.86□□□□□ -0.19
CSNK1A1-205ENST00000515435 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
CSNK1A1-205ENST00000515435 SLC4A2P04920 1241 aa13.59□□□□□ -0.23
CSNK1A1-205ENST00000515435 DCAF8L1A6NGE4 600 aa13.5□□□□□ -0.25
CSNK1A1-205ENST00000515435 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
CSNK1A1-205ENST00000515435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.26□□□□□ -0.291e-7■■□□□ 14.4
CSNK1A1-205ENST00000515435 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
CSNK1A1-205ENST00000515435 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
CSNK1A1-205ENST00000515435 ATXN8OSP0DMR3 200 aa13.06□□□□□ -0.32
CSNK1A1-205ENST00000515435 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
CSNK1A1-205ENST00000515435 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
CSNK1A1-205ENST00000515435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.93□□□□□ -0.34
CSNK1A1-205ENST00000515435 HNRNPUL2Q1KMD3 747 aaKnown RBP12.93□□□□□ -0.34
CSNK1A1-205ENST00000515435 RNF39Q9H2S5 420 aa12.81□□□□□ -0.36
CSNK1A1-205ENST00000515435 SPINK5Q9NQ38 1064 aaPredicted RBP12.72□□□□□ -0.37
CSNK1A1-205ENST00000515435 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
CSNK1A1-205ENST00000515435 APLP2Q06481 763 aa12.67□□□□□ -0.38
CSNK1A1-205ENST00000515435 TRHP20396 242 aaPredicted RBP12.62□□□□□ -0.39
CSNK1A1-205ENST00000515435 FKBP8Q14318 412 aa12.61□□□□□ -0.39
CSNK1A1-205ENST00000515435 C1QBPQ07021 282 aaKnown RBP12.61□□□□□ -0.39
CSNK1A1-205ENST00000515435 CAPN15O75808 1086 aa12.59□□□□□ -0.39
CSNK1A1-205ENST00000515435 POLA2Q14181 598 aa12.49□□□□□ -0.41
CSNK1A1-205ENST00000515435 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.42
CSNK1A1-205ENST00000515435 ABCB7O75027 752 aa12.43□□□□□ -0.42
CSNK1A1-205ENST00000515435 SLC24A1O60721 1099 aa12.32□□□□□ -0.44
CSNK1A1-205ENST00000515435 DSG3P32926 999 aa12.31□□□□□ -0.44
CSNK1A1-205ENST00000515435 FBLN2P98095 1184 aa12.29□□□□□ -0.44
CSNK1A1-205ENST00000515435 SPDYE4A6NLX3 237 aa12.26□□□□□ -0.45
CSNK1A1-205ENST00000515435 CACNB1Q02641 598 aaPredicted RBP12.23□□□□□ -0.45
CSNK1A1-205ENST00000515435 ZBTB12Q9Y330 459 aaPredicted RBP12.17□□□□□ -0.46
CSNK1A1-205ENST00000515435 PROM2Q8N271 834 aa12.1□□□□□ -0.47
CSNK1A1-205ENST00000515435 RTN4Q9NQC3 1192 aaKnown RBP12.08□□□□□ -0.48
CSNK1A1-205ENST00000515435 OSCARQ8IYS5 282 aa12.08□□□□□ -0.48
CSNK1A1-205ENST00000515435 AMER1Q5JTC6 1135 aaPredicted RBP11.97□□□□□ -0.49
CSNK1A1-205ENST00000515435 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
CSNK1A1-205ENST00000515435 FBXO3Q9UK99 471 aa11.95□□□□□ -0.5
CSNK1A1-205ENST00000515435 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
CSNK1A1-205ENST00000515435 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
CSNK1A1-205ENST00000515435 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
CSNK1A1-205ENST00000515435 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
CSNK1A1-205ENST00000515435 SSUH2Q9Y2M2 353 aa11.91□□□□□ -0.5
CSNK1A1-205ENST00000515435 VASPP50552 380 aaPredicted RBP11.87□□□□□ -0.51
CSNK1A1-205ENST00000515435 PABPN1Q86U42 306 aaKnown RBP eCLIP11.85□□□□□ -0.51
CSNK1A1-205ENST00000515435 IFNLR1Q8IU57 520 aaPredicted RBP11.79□□□□□ -0.52
CSNK1A1-205ENST00000515435 MYT1Q01538 1121 aa11.72□□□□□ -0.53
CSNK1A1-205ENST00000515435 STAG3Q9UJ98 1225 aa11.65□□□□□ -0.54
CSNK1A1-205ENST00000515435 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
CSNK1A1-205ENST00000515435 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
CSNK1A1-205ENST00000515435 MIER1Q8N108 512 aa11.59□□□□□ -0.55
CSNK1A1-205ENST00000515435 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
CSNK1A1-205ENST00000515435 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
CSNK1A1-205ENST00000515435 PKD2Q13563 968 aa11.52□□□□□ -0.57
CSNK1A1-205ENST00000515435 REM2Q8IYK8 340 aaPredicted RBP11.52□□□□□ -0.57
CSNK1A1-205ENST00000515435 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
CSNK1A1-205ENST00000515435 CLEC11AQ9Y240 323 aa11.5□□□□□ -0.57
CSNK1A1-205ENST00000515435 NISCHQ9Y2I1 1504 aa11.5□□□□□ -0.57
CSNK1A1-205ENST00000515435 SPDYE1Q8NFV5 336 aaPredicted RBP11.49□□□□□ -0.57
CSNK1A1-205ENST00000515435 HRCP23327 699 aa11.44□□□□□ -0.58
CSNK1A1-205ENST00000515435 PITPNM1O00562 1244 aa11.41□□□□□ -0.58
CSNK1A1-205ENST00000515435 PRR29P0C7W0 189 aa11.4□□□□□ -0.59
CSNK1A1-205ENST00000515435 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
CSNK1A1-205ENST00000515435 CREBZFQ9NS37 354 aa11.37□□□□□ -0.59
CSNK1A1-205ENST00000515435 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
CSNK1A1-205ENST00000515435 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
CSNK1A1-205ENST00000515435 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.6
CSNK1A1-205ENST00000515435 MNX1P50219 401 aaPredicted RBP11.32□□□□□ -0.6
CSNK1A1-205ENST00000515435 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
CSNK1A1-205ENST00000515435 NUBP1P53384 320 aa11.28□□□□□ -0.6
CSNK1A1-205ENST00000515435 RGL2O15211 777 aa11.27□□□□□ -0.61
CSNK1A1-205ENST00000515435 DAXXQ9UER7 740 aaPredicted RBP11.26□□□□□ -0.61
CSNK1A1-205ENST00000515435 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
CSNK1A1-205ENST00000515435 RASEFQ8IZ41 740 aa11.19□□□□□ -0.62
CSNK1A1-205ENST00000515435 TTBK1Q5TCY1 1321 aaPredicted RBP11.19□□□□□ -0.62
CSNK1A1-205ENST00000515435 NPM1P06748 294 aaKnown RBP eCLIP11.17□□□□□ -0.62
CSNK1A1-205ENST00000515435 DCAF8Q5TAQ9 597 aa11.17□□□□□ -0.62
CSNK1A1-205ENST00000515435 RNF25Q96BH1 459 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms