RNA–Protein interactions for RNA: ENST00000593044.5

TMC6-224, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 3,070 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-224ENST00000593044 NISCHQ9Y2I1 1504 aa35.02■■■■□ 3.2
TMC6-224ENST00000593044 CCDC180Q9P1Z9 1646 aa30.12■■■□□ 2.41
TMC6-224ENST00000593044 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
TMC6-224ENST00000593044 DCAF8L2P0C7V8 631 aa29.37■■■□□ 2.29
TMC6-224ENST00000593044 SHROOM4Q9ULL8 1493 aa29.36■■■□□ 2.29
TMC6-224ENST00000593044 DCAF1Q9Y4B6 1507 aa28.72■■■□□ 2.19
TMC6-224ENST00000593044 ABCC9O60706 1549 aa28.57■■■□□ 2.16
TMC6-224ENST00000593044 SUPT5HO00267 1087 aaKnown RBP28.47■■■□□ 2.15
TMC6-224ENST00000593044 MYO15BQ96JP2 1530 aa28.17■■■□□ 2.1
TMC6-224ENST00000593044 SCRIBQ14160 1630 aa28.12■■■□□ 2.09
TMC6-224ENST00000593044 NACADO15069 1562 aa28.04■■■□□ 2.08
TMC6-224ENST00000593044 RB1CC1Q8TDY2 1594 aa27.76■■■□□ 2.03
TMC6-224ENST00000593044 RSF1Q96T23 1441 aaPredicted RBP27.43■■□□□ 1.98
TMC6-224ENST00000593044 CECR2Q9BXF3 1484 aa27.36■■□□□ 1.97
TMC6-224ENST00000593044 UNC13AQ9UPW8 1703 aa27.29■■□□□ 1.96
TMC6-224ENST00000593044 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
TMC6-224ENST00000593044 PABPN1Q86U42 306 aaKnown RBP eCLIP27.19■■□□□ 1.944e-7■□□□□ 10.3
TMC6-224ENST00000593044 MROH2BQ7Z745 1585 aa27.19■■□□□ 1.94
TMC6-224ENST00000593044 WIZO95785 1651 aa27.01■■□□□ 1.91
TMC6-224ENST00000593044 BICRAQ9NZM4 1560 aa26.98■■□□□ 1.91
TMC6-224ENST00000593044 BAZ1AQ9NRL2 1556 aaPredicted RBP26.97■■□□□ 1.91
TMC6-224ENST00000593044 SMARCA4P51532 1647 aa26.82■■□□□ 1.88
TMC6-224ENST00000593044 TRIM41Q8WV44 630 aa26.59■■□□□ 1.85
TMC6-224ENST00000593044 TOP2AP11388 1531 aaKnown RBP26.56■■□□□ 1.84
TMC6-224ENST00000593044 LOC105371045A0A1W2PR82 267 aa26.47■■□□□ 1.83
TMC6-224ENST00000593044 CCDC88BA6NC98 1476 aa26.45■■□□□ 1.83
TMC6-224ENST00000593044 SMARCA2P51531 1590 aa26.4■■□□□ 1.82
TMC6-224ENST00000593044 FAM9AQ8IZU1 332 aaPredicted RBP26.35■■□□□ 1.81
TMC6-224ENST00000593044 ATAD2BQ9ULI0 1458 aa26.33■■□□□ 1.8
TMC6-224ENST00000593044 PEG3Q9GZU2 1588 aa26.32■■□□□ 1.8
TMC6-224ENST00000593044 HRCP23327 699 aa26.31■■□□□ 1.8
TMC6-224ENST00000593044 PCGF6Q9BYE7 350 aa26.29■■□□□ 1.8
TMC6-224ENST00000593044 EIF4G1Q04637 1599 aaKnown RBP26.25■■□□□ 1.79
TMC6-224ENST00000593044 BAZ1BQ9UIG0 1483 aaKnown RBP26.23■■□□□ 1.79
TMC6-224ENST00000593044 EHMT2Q96KQ7 1210 aa26.16■■□□□ 1.78
TMC6-224ENST00000593044 ABCC8Q09428 1581 aa26.14■■□□□ 1.78
TMC6-224ENST00000593044 PPARGC1BQ86YN6 1023 aaKnown RBP25.96■■□□□ 1.75
TMC6-224ENST00000593044 NCAPD3P42695 1498 aa25.95■■□□□ 1.74
TMC6-224ENST00000593044 HMGXB3Q12766 1538 aa25.86■■□□□ 1.73
TMC6-224ENST00000593044 WRNQ14191 1432 aaPredicted RBP eCLIP25.81■■□□□ 1.72
TMC6-224ENST00000593044 SOGA1O94964 1423 aa25.75■■□□□ 1.71
TMC6-224ENST00000593044 CC2D2AQ9P2K1 1620 aa25.71■■□□□ 1.71
TMC6-224ENST00000593044 SYNJ1O43426 1573 aa25.68■■□□□ 1.7
TMC6-224ENST00000593044 RUSC2Q8N2Y8 1516 aa25.67■■□□□ 1.7
TMC6-224ENST00000593044 CSRNP3Q8WYN3 585 aa25.58■■□□□ 1.69
TMC6-224ENST00000593044 TRIM26Q12899 539 aaPredicted RBP25.55■■□□□ 1.68
TMC6-224ENST00000593044 CFTRP13569 1480 aa25.52■■□□□ 1.68
TMC6-224ENST00000593044 EEA1Q15075 1411 aa25.49■■□□□ 1.67
TMC6-224ENST00000593044 UBTFP17480 764 aaKnown RBP25.45■■□□□ 1.67
TMC6-224ENST00000593044 TOP2BQ02880 1626 aa25.43■■□□□ 1.66
TMC6-224ENST00000593044 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
TMC6-224ENST00000593044 CUX1P39880 1505 aa25.36■■□□□ 1.65
TMC6-224ENST00000593044 BIVM-ERCC5R4GMW8 1640 aa25.34■■□□□ 1.65
TMC6-224ENST00000593044 TNIKQ9UKE5 1360 aa25.29■■□□□ 1.64
TMC6-224ENST00000593044 GOLGA3Q08378 1498 aa25.29■■□□□ 1.64
TMC6-224ENST00000593044 PELP1Q8IZL8 1130 aaKnown RBP25.28■■□□□ 1.64
TMC6-224ENST00000593044 DNAJC5BQ9UF47 199 aa25.28■■□□□ 1.64
TMC6-224ENST00000593044 CEP162Q5TB80 1403 aa25.28■■□□□ 1.64
TMC6-224ENST00000593044 PRDM2Q13029 1718 aa25.27■■□□□ 1.64
TMC6-224ENST00000593044 CEP164Q9UPV0 1460 aa25.23■■□□□ 1.63
TMC6-224ENST00000593044 NESP48681 1621 aa25.22■■□□□ 1.63
TMC6-224ENST00000593044 RANGAP1P46060 587 aaPredicted RBP25.16■■□□□ 1.62
TMC6-224ENST00000593044 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
TMC6-224ENST00000593044 KIF21BO75037 1637 aa25.16■■□□□ 1.62
TMC6-224ENST00000593044 RAPGEF2Q9Y4G8 1499 aa25.16■■□□□ 1.62
TMC6-224ENST00000593044 TTBK1Q5TCY1 1321 aaPredicted RBP25.1■■□□□ 1.61
TMC6-224ENST00000593044 KIF27Q86VH2 1401 aa25.09■■□□□ 1.61
TMC6-224ENST00000593044 FGD5Q6ZNL6 1462 aa25.04■■□□□ 1.6
TMC6-224ENST00000593044 CUX2O14529 1486 aa25.01■■□□□ 1.59
TMC6-224ENST00000593044 CLIP1P30622 1438 aa24.99■■□□□ 1.59
TMC6-224ENST00000593044 PRXQ9BXM0 1461 aa24.98■■□□□ 1.59
TMC6-224ENST00000593044 ZEB1P37275 1124 aaPredicted RBP24.96■■□□□ 1.59
TMC6-224ENST00000593044 LAMC3Q9Y6N6 1575 aa24.96■■□□□ 1.59
TMC6-224ENST00000593044 TOPBP1Q92547 1522 aa24.9■■□□□ 1.58
TMC6-224ENST00000593044 DNMBPQ6XZF7 1577 aa24.9■■□□□ 1.58
TMC6-224ENST00000593044 ERICH3Q5RHP9 1530 aa24.89■■□□□ 1.58
TMC6-224ENST00000593044 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.57
TMC6-224ENST00000593044 IGF1RP08069 1367 aa24.88■■□□□ 1.57
TMC6-224ENST00000593044 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
TMC6-224ENST00000593044 POLA1P09884 1462 aaPredicted RBP24.84■■□□□ 1.57
TMC6-224ENST00000593044 URB2Q14146 1524 aaKnown RBP24.82■■□□□ 1.56
TMC6-224ENST00000593044 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
TMC6-224ENST00000593044 KIF21AQ7Z4S6 1674 aa24.77■■□□□ 1.56
TMC6-224ENST00000593044 VPS8Q8N3P4 1428 aa24.76■■□□□ 1.55
TMC6-224ENST00000593044 APLP2Q06481 763 aa24.72■■□□□ 1.55
TMC6-224ENST00000593044 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
TMC6-224ENST00000593044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.67■■□□□ 1.54
TMC6-224ENST00000593044 TDRD9Q8NDG6 1382 aaKnown RBP24.66■■□□□ 1.54
TMC6-224ENST00000593044 ARAP1Q96P48 1450 aa24.63■■□□□ 1.53
TMC6-224ENST00000593044 ARHGAP35Q9NRY4 1499 aa24.57■■□□□ 1.52
TMC6-224ENST00000593044 CCER1Q8TC90 406 aaPredicted RBP24.55■■□□□ 1.52
TMC6-224ENST00000593044 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
TMC6-224ENST00000593044 P3H3Q8IVL6 736 aa24.52■■□□□ 1.52
TMC6-224ENST00000593044 GAPVD1Q14C86 1478 aa24.51■■□□□ 1.51
TMC6-224ENST00000593044 MRC2Q9UBG0 1479 aa24.49■■□□□ 1.51
TMC6-224ENST00000593044 SCAF1Q9H7N4 1312 aaKnown RBP24.48■■□□□ 1.51
TMC6-224ENST00000593044 MYT1Q01538 1121 aa24.48■■□□□ 1.51
TMC6-224ENST00000593044 KANK4Q5T7N3 995 aaPredicted RBP24.46■■□□□ 1.51
TMC6-224ENST00000593044 ABCA5Q8WWZ7 1642 aa24.45■■□□□ 1.5
TMC6-224ENST00000593044 CUL7Q14999 1698 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms