RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
SSR1-206ENST00000479365 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
SSR1-206ENST00000479365 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
SSR1-206ENST00000479365 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
SSR1-206ENST00000479365 NISCHQ9Y2I1 1504 aa18.11■□□□□ 0.49
SSR1-206ENST00000479365 PLPPR3Q6T4P5 718 aa18.07■□□□□ 0.48
SSR1-206ENST00000479365 FOXD1Q16676 465 aa17.92■□□□□ 0.46
SSR1-206ENST00000479365 ADRA2BP18089 450 aa17.31■□□□□ 0.36
SSR1-206ENST00000479365 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
SSR1-206ENST00000479365 PIAS4Q8N2W9 510 aaPredicted RBP16.91■□□□□ 0.3
SSR1-206ENST00000479365 MSH5O43196 834 aa16.43■□□□□ 0.22
SSR1-206ENST00000479365 CCDC180Q9P1Z9 1646 aa16.16■□□□□ 0.18
SSR1-206ENST00000479365 ABCC9O60706 1549 aa16.1■□□□□ 0.17
SSR1-206ENST00000479365 PPP4R3CPQ6ZMV5 832 aa15.97■□□□□ 0.15
SSR1-206ENST00000479365 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
SSR1-206ENST00000479365 KCNA4P22459 653 aa15.7■□□□□ 0.1
SSR1-206ENST00000479365 MAPK8IP2Q13387 824 aaPredicted RBP15.69■□□□□ 0.1
SSR1-206ENST00000479365 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
SSR1-206ENST00000479365 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
SSR1-206ENST00000479365 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
SSR1-206ENST00000479365 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
SSR1-206ENST00000479365 RB1CC1Q8TDY2 1594 aa15.33■□□□□ 0.05
SSR1-206ENST00000479365 NACADO15069 1562 aa15.26■□□□□ 0.03
SSR1-206ENST00000479365 DCAF8L2P0C7V8 631 aa15.2■□□□□ 0.02
SSR1-206ENST00000479365 RNF216Q9NWF9 866 aaPredicted RBP15.14■□□□□ 0.01
SSR1-206ENST00000479365 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
SSR1-206ENST00000479365 HOXD11P31277 338 aaPredicted RBP15.08■□□□□ 0
SSR1-206ENST00000479365 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
SSR1-206ENST00000479365 ZCCHC6Q5VYS8 1495 aaKnown RBP15.04■□□□□ -0
SSR1-206ENST00000479365 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
SSR1-206ENST00000479365 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
SSR1-206ENST00000479365 DCAF1Q9Y4B6 1507 aa14.95□□□□□ -0.02
SSR1-206ENST00000479365 BICRAQ9NZM4 1560 aa14.94□□□□□ -0.02
SSR1-206ENST00000479365 POTEDQ86YR6 584 aa14.93□□□□□ -0.02
SSR1-206ENST00000479365 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
SSR1-206ENST00000479365 DCAF8L1A6NGE4 600 aa14.78□□□□□ -0.04
SSR1-206ENST00000479365 SCRIBQ14160 1630 aa14.77□□□□□ -0.04
SSR1-206ENST00000479365 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
SSR1-206ENST00000479365 SHROOM4Q9ULL8 1493 aa14.69□□□□□ -0.06
SSR1-206ENST00000479365 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
SSR1-206ENST00000479365 EIF4G1Q04637 1599 aaKnown RBP14.54□□□□□ -0.08
SSR1-206ENST00000479365 SLC4A2P04920 1241 aa14.49□□□□□ -0.09
SSR1-206ENST00000479365 CECR2Q9BXF3 1484 aa14.48□□□□□ -0.09
SSR1-206ENST00000479365 ZBTB22O15209 634 aa14.47□□□□□ -0.09
SSR1-206ENST00000479365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.4□□□□□ -0.11e-10■■■□□ 14.7
SSR1-206ENST00000479365 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
SSR1-206ENST00000479365 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
SSR1-206ENST00000479365 U3KPZ7 1027 aaPredicted RBP14.19□□□□□ -0.14
SSR1-206ENST00000479365 MYCNP04198 464 aaPredicted RBP14.14□□□□□ -0.15
SSR1-206ENST00000479365 RNF39Q9H2S5 420 aa14.12□□□□□ -0.15
SSR1-206ENST00000479365 NCAPD3P42695 1498 aa14.11□□□□□ -0.15
SSR1-206ENST00000479365 SMARCA4P51532 1647 aa14.1□□□□□ -0.15
SSR1-206ENST00000479365 ATAD2BQ9ULI0 1458 aa14.1□□□□□ -0.15
SSR1-206ENST00000479365 BAZ1AQ9NRL2 1556 aaPredicted RBP14.03□□□□□ -0.16
SSR1-206ENST00000479365 SMARCA2P51531 1590 aa14.02□□□□□ -0.16
SSR1-206ENST00000479365 HMGXB3Q12766 1538 aa14□□□□□ -0.17
SSR1-206ENST00000479365 MROH2BQ7Z745 1585 aa13.98□□□□□ -0.17
SSR1-206ENST00000479365 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.17
SSR1-206ENST00000479365 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
SSR1-206ENST00000479365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
SSR1-206ENST00000479365 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
SSR1-206ENST00000479365 C1QBPQ07021 282 aaKnown RBP13.91□□□□□ -0.18
SSR1-206ENST00000479365 SAMD1Q6SPF0 538 aaPredicted RBP13.91□□□□□ -0.18
SSR1-206ENST00000479365 NESP48681 1621 aa13.89□□□□□ -0.19
SSR1-206ENST00000479365 ERCC6Q03468 1493 aa13.85□□□□□ -0.19
SSR1-206ENST00000479365 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
SSR1-206ENST00000479365 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
SSR1-206ENST00000479365 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
SSR1-206ENST00000479365 WIZO95785 1651 aa13.8□□□□□ -0.2
SSR1-206ENST00000479365 CUX2O14529 1486 aa13.8□□□□□ -0.2
SSR1-206ENST00000479365 APLP2Q06481 763 aa13.76□□□□□ -0.21
SSR1-206ENST00000479365 LAMC3Q9Y6N6 1575 aa13.75□□□□□ -0.21
SSR1-206ENST00000479365 CAPN15O75808 1086 aa13.73□□□□□ -0.21
SSR1-206ENST00000479365 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
SSR1-206ENST00000479365 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
SSR1-206ENST00000479365 THOC2Q8NI27 1593 aaKnown RBP13.71□□□□□ -0.22
SSR1-206ENST00000479365 CADPSQ9ULU8 1353 aa13.69□□□□□ -0.22
SSR1-206ENST00000479365 TRHP20396 242 aaPredicted RBP13.68□□□□□ -0.22
SSR1-206ENST00000479365 DNAJC5Q9H3Z4 198 aa13.68□□□□□ -0.22
SSR1-206ENST00000479365 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
SSR1-206ENST00000479365 PDS5BQ9NTI5 1447 aa13.66□□□□□ -0.22
SSR1-206ENST00000479365 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
SSR1-206ENST00000479365 ZNF219Q9P2Y4 722 aaPredicted RBP13.61□□□□□ -0.23
SSR1-206ENST00000479365 CFTRP13569 1480 aa13.56□□□□□ -0.24
SSR1-206ENST00000479365 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
SSR1-206ENST00000479365 WDR62O43379 1518 aa13.54□□□□□ -0.24
SSR1-206ENST00000479365 FANCD2Q9BXW9 1451 aa13.53□□□□□ -0.24
SSR1-206ENST00000479365 CEP164Q9UPV0 1460 aa13.52□□□□□ -0.25
SSR1-206ENST00000479365 ABCB7O75027 752 aa13.51□□□□□ -0.25
SSR1-206ENST00000479365 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
SSR1-206ENST00000479365 DSG3P32926 999 aa13.47□□□□□ -0.25
SSR1-206ENST00000479365 POLA2Q14181 598 aa13.46□□□□□ -0.25
SSR1-206ENST00000479365 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
SSR1-206ENST00000479365 PRDM2Q13029 1718 aa13.37□□□□□ -0.27
SSR1-206ENST00000479365 SLC24A1O60721 1099 aa13.37□□□□□ -0.27
SSR1-206ENST00000479365 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
SSR1-206ENST00000479365 ZNF608Q9ULD9 1512 aaPredicted RBP13.26□□□□□ -0.29
SSR1-206ENST00000479365 DNMBPQ6XZF7 1577 aa13.24□□□□□ -0.29
SSR1-206ENST00000479365 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
SSR1-206ENST00000479365 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms