RNA–Protein interactions for RNA: ENST00000614461.4

RCC1L-202, Transcript of RCC1 like, humanhuman

TSL 1 (best) BASIC

Gene RCC1L, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-202ENST00000614461 NISCHQ9Y2I1 1504 aa56.42■■■■■ 6.62
RCC1L-202ENST00000614461 CCDC180Q9P1Z9 1646 aa48.23■■■■■ 5.31
RCC1L-202ENST00000614461 SHROOM4Q9ULL8 1493 aa47.72■■■■■ 5.23
RCC1L-202ENST00000614461 ZCCHC6Q5VYS8 1495 aaKnown RBP47.61■■■■■ 5.21
RCC1L-202ENST00000614461 DCAF8L2P0C7V8 631 aa46.98■■■■■ 5.11
RCC1L-202ENST00000614461 SUPT5HO00267 1087 aaKnown RBP46.46■■■■■ 5.03
RCC1L-202ENST00000614461 DCAF1Q9Y4B6 1507 aa46.25■■■■■ 4.99
RCC1L-202ENST00000614461 ABCC9O60706 1549 aa45.28■■■■■ 4.84
RCC1L-202ENST00000614461 SCRIBQ14160 1630 aa45.18■■■■■ 4.82
RCC1L-202ENST00000614461 MYO15BQ96JP2 1530 aa45.13■■■■■ 4.82
RCC1L-202ENST00000614461 CHIC1Q5VXU3 224 aa44.85■■■■■ 4.77
RCC1L-202ENST00000614461 NACADO15069 1562 aa44.73■■■■■ 4.75
RCC1L-202ENST00000614461 RSF1Q96T23 1441 aaPredicted RBP44.43■■■■■ 4.7
RCC1L-202ENST00000614461 RB1CC1Q8TDY2 1594 aa44.14■■■■■ 4.66
RCC1L-202ENST00000614461 CECR2Q9BXF3 1484 aa44.11■■■■■ 4.65
RCC1L-202ENST00000614461 MROH2BQ7Z745 1585 aa43.87■■■■■ 4.61
RCC1L-202ENST00000614461 WIZO95785 1651 aa43.61■■■■■ 4.57
RCC1L-202ENST00000614461 LOC105371045A0A1W2PR82 267 aa43.54■■■■■ 4.56
RCC1L-202ENST00000614461 UNC13AQ9UPW8 1703 aa43.54■■■■■ 4.56
RCC1L-202ENST00000614461 BAZ1AQ9NRL2 1556 aaPredicted RBP43.36■■■■■ 4.53
RCC1L-202ENST00000614461 TRIM41Q8WV44 630 aa43.29■■■■■ 4.52
RCC1L-202ENST00000614461 PABPN1Q86U42 306 aaKnown RBP eCLIP43.19■■■■■ 4.5
RCC1L-202ENST00000614461 SMARCA4P51532 1647 aa43.11■■■■■ 4.49
RCC1L-202ENST00000614461 BICRAQ9NZM4 1560 aa43.04■■■■■ 4.48
RCC1L-202ENST00000614461 FAM9AQ8IZU1 332 aaPredicted RBP42.97■■■■■ 4.47
RCC1L-202ENST00000614461 TOP2AP11388 1531 aaKnown RBP42.87■■■■■ 4.45
RCC1L-202ENST00000614461 PCGF6Q9BYE7 350 aa42.82■■■■■ 4.45
RCC1L-202ENST00000614461 EIF4G1Q04637 1599 aaKnown RBP42.74■■■■■ 4.43
RCC1L-202ENST00000614461 CCDC88BA6NC98 1476 aa42.71■■■■■ 4.43
RCC1L-202ENST00000614461 EHMT2Q96KQ7 1210 aa42.67■■■■■ 4.42
RCC1L-202ENST00000614461 SMARCA2P51531 1590 aa42.65■■■■■ 4.42
RCC1L-202ENST00000614461 ABCC8Q09428 1581 aa42.43■■■■■ 4.38
RCC1L-202ENST00000614461 HRCP23327 699 aa42.34■■■■■ 4.37
RCC1L-202ENST00000614461 PEG3Q9GZU2 1588 aa42.29■■■■■ 4.36
RCC1L-202ENST00000614461 ATAD2BQ9ULI0 1458 aa42.15■■■■■ 4.34
RCC1L-202ENST00000614461 TRIM26Q12899 539 aaPredicted RBP42.09■■■■■ 4.33
RCC1L-202ENST00000614461 BAZ1BQ9UIG0 1483 aaKnown RBP42■■■■■ 4.31
RCC1L-202ENST00000614461 SOGA1O94964 1423 aa41.9■■■■■ 4.3
RCC1L-202ENST00000614461 RUSC2Q8N2Y8 1516 aa41.75■■■■■ 4.27
RCC1L-202ENST00000614461 WRNQ14191 1432 aaPredicted RBP eCLIP41.73■■■■■ 4.27
RCC1L-202ENST00000614461 PPARGC1BQ86YN6 1023 aaKnown RBP41.69■■■■■ 4.26
RCC1L-202ENST00000614461 SYNJ1O43426 1573 aa41.6■■■■■ 4.25
RCC1L-202ENST00000614461 CSRNP3Q8WYN3 585 aa41.54■■■■■ 4.24
RCC1L-202ENST00000614461 EEA1Q15075 1411 aa41.45■■■■■ 4.23
RCC1L-202ENST00000614461 NCAPD3P42695 1498 aa41.41■■■■■ 4.22
RCC1L-202ENST00000614461 CEP162Q5TB80 1403 aa41.37■■■■■ 4.21
RCC1L-202ENST00000614461 HMGXB3Q12766 1538 aa41.36■■■■■ 4.21
RCC1L-202ENST00000614461 UBTFP17480 764 aaKnown RBP41.33■■■■■ 4.21
RCC1L-202ENST00000614461 TNIKQ9UKE5 1360 aa41.31■■■■■ 4.2
RCC1L-202ENST00000614461 GOLGA3Q08378 1498 aa41.2■■■■■ 4.19
RCC1L-202ENST00000614461 TTBK1Q5TCY1 1321 aaPredicted RBP41.11■■■■■ 4.17
RCC1L-202ENST00000614461 TOP2BQ02880 1626 aa41.1■■■■■ 4.17
RCC1L-202ENST00000614461 CEP164Q9UPV0 1460 aa41.03■■■■■ 4.16
RCC1L-202ENST00000614461 KIF21BO75037 1637 aa40.97■■■■■ 4.15
RCC1L-202ENST00000614461 BIVM-ERCC5R4GMW8 1640 aa40.96■■■■■ 4.15
RCC1L-202ENST00000614461 CFTRP13569 1480 aa40.93■■■■■ 4.14
RCC1L-202ENST00000614461 RAPGEF2Q9Y4G8 1499 aa40.89■■■■■ 4.14
RCC1L-202ENST00000614461 CUX1P39880 1505 aa40.88■■■■■ 4.13
RCC1L-202ENST00000614461 ZEB1P37275 1124 aaPredicted RBP40.79■■■■■ 4.12
RCC1L-202ENST00000614461 RANGAP1P46060 587 aaPredicted RBP40.76■■■■■ 4.12
RCC1L-202ENST00000614461 CC2D2AQ9P2K1 1620 aa40.76■■■■■ 4.12
RCC1L-202ENST00000614461 CLIP1P30622 1438 aa40.73■■■■■ 4.11
RCC1L-202ENST00000614461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.64■■■■■ 4.1
RCC1L-202ENST00000614461 CADPSQ9ULU8 1353 aa40.59■■■■■ 4.09
RCC1L-202ENST00000614461 PRDM2Q13029 1718 aa40.53■■■■■ 4.08
RCC1L-202ENST00000614461 PRXQ9BXM0 1461 aa40.53■■■■■ 4.08
RCC1L-202ENST00000614461 KIF27Q86VH2 1401 aa40.48■■■■■ 4.07
RCC1L-202ENST00000614461 VPS8Q8N3P4 1428 aa40.45■■■■■ 4.07
RCC1L-202ENST00000614461 CCER1Q8TC90 406 aaPredicted RBP40.43■■■■■ 4.06
RCC1L-202ENST00000614461 ERICH3Q5RHP9 1530 aa40.42■■■■■ 4.06
RCC1L-202ENST00000614461 CUX2O14529 1486 aa40.27■■■■■ 4.04
RCC1L-202ENST00000614461 FGD5Q6ZNL6 1462 aa40.24■■■■■ 4.03
RCC1L-202ENST00000614461 FANCD2Q9BXW9 1451 aa40.21■■■■■ 4.03
RCC1L-202ENST00000614461 NESP48681 1621 aa40.19■■■■■ 4.02
RCC1L-202ENST00000614461 APLP2Q06481 763 aa40.19■■■■■ 4.02
RCC1L-202ENST00000614461 ARAP1Q96P48 1450 aa40.18■■■■■ 4.02
RCC1L-202ENST00000614461 IGF1RP08069 1367 aa40.13■■■■■ 4.01
RCC1L-202ENST00000614461 HNRNPUL2Q1KMD3 747 aaKnown RBP40.07■■■■■ 4
RCC1L-202ENST00000614461 DNAJC5BQ9UF47 199 aa40.02■■■■■ 4
RCC1L-202ENST00000614461 RAD54L2Q9Y4B4 1467 aa39.94■■■■□ 3.98
RCC1L-202ENST00000614461 ARHGAP35Q9NRY4 1499 aa39.94■■■■□ 3.98
RCC1L-202ENST00000614461 CARMIL1Q5VZK9 1371 aa39.93■■■■□ 3.98
RCC1L-202ENST00000614461 DNMBPQ6XZF7 1577 aa39.91■■■■□ 3.98
RCC1L-202ENST00000614461 KANK4Q5T7N3 995 aaPredicted RBP39.9■■■■□ 3.98
RCC1L-202ENST00000614461 TOPBP1Q92547 1522 aa39.89■■■■□ 3.98
RCC1L-202ENST00000614461 POLA1P09884 1462 aaPredicted RBP39.85■■■■□ 3.97
RCC1L-202ENST00000614461 LAMC3Q9Y6N6 1575 aa39.73■■■■□ 3.95
RCC1L-202ENST00000614461 ABCA10Q8WWZ4 1543 aa39.72■■■■□ 3.95
RCC1L-202ENST00000614461 URB2Q14146 1524 aaKnown RBP39.7■■■■□ 3.95
RCC1L-202ENST00000614461 P3H3Q8IVL6 736 aa39.56■■■■□ 3.92
RCC1L-202ENST00000614461 PDS5BQ9NTI5 1447 aa39.5■■■■□ 3.91
RCC1L-202ENST00000614461 TDRD9Q8NDG6 1382 aaKnown RBP39.48■■■■□ 3.91
RCC1L-202ENST00000614461 KIF21AQ7Z4S6 1674 aa39.46■■■■□ 3.91
RCC1L-202ENST00000614461 WDR97A6NE52 1622 aa39.43■■■■□ 3.9
RCC1L-202ENST00000614461 RRBP1Q9P2E9 1410 aaKnown RBP39.4■■■■□ 3.9
RCC1L-202ENST00000614461 CUL7Q14999 1698 aa39.38■■■■□ 3.89
RCC1L-202ENST00000614461 TIAM1Q13009 1591 aa39.36■■■■□ 3.89
RCC1L-202ENST00000614461 FHOD3Q2V2M9 1422 aa39.35■■■■□ 3.89
RCC1L-202ENST00000614461 ATP1B4Q9UN42 357 aaPredicted RBP39.31■■■■□ 3.88
RCC1L-202ENST00000614461 CCNB3Q8WWL7 1395 aa39.3■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms