RNA–Protein interactions for RNA: ENST00000602219.1

HNRNPM-216, Transcript of heterogeneous nuclear ribonucleoprotein M, humanhuman

Gene HNRNPM, Length 1,809 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPM-216ENST00000602219 NISCHQ9Y2I1 1504 aa33.5■■■□□ 2.95
HNRNPM-216ENST00000602219 CCDC180Q9P1Z9 1646 aa29.43■■■□□ 2.3
HNRNPM-216ENST00000602219 ABCC9O60706 1549 aa28.44■■■□□ 2.14
HNRNPM-216ENST00000602219 ZCCHC6Q5VYS8 1495 aaKnown RBP28.02■■■□□ 2.08
HNRNPM-216ENST00000602219 DCAF8L2P0C7V8 631 aa27.93■■■□□ 2.06
HNRNPM-216ENST00000602219 DCAF1Q9Y4B6 1507 aa27.68■■■□□ 2.02
HNRNPM-216ENST00000602219 NACADO15069 1562 aa27.59■■■□□ 2.01
HNRNPM-216ENST00000602219 MYO15BQ96JP2 1530 aa27.58■■■□□ 2.01
HNRNPM-216ENST00000602219 RB1CC1Q8TDY2 1594 aa27.5■■□□□ 1.99
HNRNPM-216ENST00000602219 SCRIBQ14160 1630 aa27.03■■□□□ 1.92
HNRNPM-216ENST00000602219 SHROOM4Q9ULL8 1493 aa26.95■■□□□ 1.91
HNRNPM-216ENST00000602219 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
HNRNPM-216ENST00000602219 PABPN1Q86U42 306 aaKnown RBP eCLIP26.74■■□□□ 1.87
HNRNPM-216ENST00000602219 BICRAQ9NZM4 1560 aa26.67■■□□□ 1.86
HNRNPM-216ENST00000602219 CECR2Q9BXF3 1484 aa26.1■■□□□ 1.77
HNRNPM-216ENST00000602219 EIF4G1Q04637 1599 aaKnown RBP25.93■■□□□ 1.74
HNRNPM-216ENST00000602219 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
HNRNPM-216ENST00000602219 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
HNRNPM-216ENST00000602219 SMARCA4P51532 1647 aa25.86■■□□□ 1.73
HNRNPM-216ENST00000602219 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
HNRNPM-216ENST00000602219 CC2D2AQ9P2K1 1620 aa25.69■■□□□ 1.7
HNRNPM-216ENST00000602219 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
HNRNPM-216ENST00000602219 SUPT5HO00267 1087 aaKnown RBP25.65■■□□□ 1.7
HNRNPM-216ENST00000602219 ATAD2BQ9ULI0 1458 aa25.61■■□□□ 1.69
HNRNPM-216ENST00000602219 WIZO95785 1651 aa25.6■■□□□ 1.69
HNRNPM-216ENST00000602219 PEG3Q9GZU2 1588 aa25.57■■□□□ 1.68
HNRNPM-216ENST00000602219 SMARCA2P51531 1590 aa25.56■■□□□ 1.68
HNRNPM-216ENST00000602219 NCAPD3P42695 1498 aa25.5■■□□□ 1.67
HNRNPM-216ENST00000602219 BAZ1BQ9UIG0 1483 aaKnown RBP25.43■■□□□ 1.66
HNRNPM-216ENST00000602219 HMGXB3Q12766 1538 aa25.38■■□□□ 1.65
HNRNPM-216ENST00000602219 TOP2AP11388 1531 aaKnown RBP25.33■■□□□ 1.64
HNRNPM-216ENST00000602219 CCDC88BA6NC98 1476 aa25.08■■□□□ 1.61
HNRNPM-216ENST00000602219 CADPSQ9ULU8 1353 aa24.82■■□□□ 1.56
HNRNPM-216ENST00000602219 NESP48681 1621 aa24.78■■□□□ 1.56
HNRNPM-216ENST00000602219 CFTRP13569 1480 aa24.77■■□□□ 1.56
HNRNPM-216ENST00000602219 LAMC3Q9Y6N6 1575 aa24.7■■□□□ 1.54
HNRNPM-216ENST00000602219 PDS5BQ9NTI5 1447 aa24.56■■□□□ 1.52
HNRNPM-216ENST00000602219 FANCD2Q9BXW9 1451 aa24.52■■□□□ 1.52
HNRNPM-216ENST00000602219 PRDM2Q13029 1718 aa24.49■■□□□ 1.51
HNRNPM-216ENST00000602219 ERCC6Q03468 1493 aa24.45■■□□□ 1.5
HNRNPM-216ENST00000602219 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
HNRNPM-216ENST00000602219 KIF21AQ7Z4S6 1674 aa24.41■■□□□ 1.5
HNRNPM-216ENST00000602219 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
HNRNPM-216ENST00000602219 WRNQ14191 1432 aaPredicted RBP eCLIP24.28■■□□□ 1.48
HNRNPM-216ENST00000602219 MRC2Q9UBG0 1479 aa24.26■■□□□ 1.47
HNRNPM-216ENST00000602219 URB2Q14146 1524 aaKnown RBP24.25■■□□□ 1.47
HNRNPM-216ENST00000602219 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
HNRNPM-216ENST00000602219 CUX1P39880 1505 aa24.22■■□□□ 1.47
HNRNPM-216ENST00000602219 THOC2Q8NI27 1593 aaKnown RBP24.19■■□□□ 1.46
HNRNPM-216ENST00000602219 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
HNRNPM-216ENST00000602219 SYNJ1O43426 1573 aa24.18■■□□□ 1.46
HNRNPM-216ENST00000602219 DNMBPQ6XZF7 1577 aa24.17■■□□□ 1.46
HNRNPM-216ENST00000602219 TRIM41Q8WV44 630 aa24.16■■□□□ 1.46
HNRNPM-216ENST00000602219 WDR62O43379 1518 aa24.15■■□□□ 1.46
HNRNPM-216ENST00000602219 TOP2BQ02880 1626 aa24.12■■□□□ 1.45
HNRNPM-216ENST00000602219 BIVM-ERCC5R4GMW8 1640 aa24.08■■□□□ 1.45
HNRNPM-216ENST00000602219 FGD5Q6ZNL6 1462 aa24.05■■□□□ 1.44
HNRNPM-216ENST00000602219 POLA1P09884 1462 aaPredicted RBP24.03■■□□□ 1.44
HNRNPM-216ENST00000602219 CUX2O14529 1486 aa23.97■■□□□ 1.43
HNRNPM-216ENST00000602219 SOGA1O94964 1423 aa23.96■■□□□ 1.43
HNRNPM-216ENST00000602219 RAD54L2Q9Y4B4 1467 aa23.96■■□□□ 1.43
HNRNPM-216ENST00000602219 IFT140Q96RY7 1462 aa23.88■■□□□ 1.41
HNRNPM-216ENST00000602219 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
HNRNPM-216ENST00000602219 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.4
HNRNPM-216ENST00000602219 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
HNRNPM-216ENST00000602219 ZNF608Q9ULD9 1512 aaPredicted RBP23.78■■□□□ 1.4
HNRNPM-216ENST00000602219 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
HNRNPM-216ENST00000602219 RUSC2Q8N2Y8 1516 aa23.74■■□□□ 1.39
HNRNPM-216ENST00000602219 AQRO60306 1485 aaKnown RBP eCLIP23.73■■□□□ 1.395e-24■■■■□ 20.3
HNRNPM-216ENST00000602219 KIF27Q86VH2 1401 aa23.72■■□□□ 1.39
HNRNPM-216ENST00000602219 FAM9AQ8IZU1 332 aaPredicted RBP23.7■■□□□ 1.39
HNRNPM-216ENST00000602219 GAPVD1Q14C86 1478 aa23.67■■□□□ 1.38
HNRNPM-216ENST00000602219 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
HNRNPM-216ENST00000602219 ABCA5Q8WWZ7 1642 aa23.65■■□□□ 1.38
HNRNPM-216ENST00000602219 EEA1Q15075 1411 aa23.6■■□□□ 1.37
HNRNPM-216ENST00000602219 IGF1RP08069 1367 aa23.59■■□□□ 1.37
HNRNPM-216ENST00000602219 GRIN2BQ13224 1484 aa23.58■■□□□ 1.37
HNRNPM-216ENST00000602219 CSRNP3Q8WYN3 585 aa23.57■■□□□ 1.36
HNRNPM-216ENST00000602219 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
HNRNPM-216ENST00000602219 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
HNRNPM-216ENST00000602219 SNAPC4Q5SXM2 1469 aa23.49■■□□□ 1.35
HNRNPM-216ENST00000602219 CARMIL1Q5VZK9 1371 aa23.46■■□□□ 1.35
HNRNPM-216ENST00000602219 MAGI1Q96QZ7 1491 aaPredicted RBP23.44■■□□□ 1.34
HNRNPM-216ENST00000602219 EHMT2Q96KQ7 1210 aa23.41■■□□□ 1.34
HNRNPM-216ENST00000602219 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
HNRNPM-216ENST00000602219 PRXQ9BXM0 1461 aa23.41■■□□□ 1.34
HNRNPM-216ENST00000602219 FBLN2P98095 1184 aa23.4■■□□□ 1.34
HNRNPM-216ENST00000602219 ADAMTS12P58397 1594 aa23.39■■□□□ 1.34
HNRNPM-216ENST00000602219 CUL7Q14999 1698 aa23.39■■□□□ 1.33
HNRNPM-216ENST00000602219 CHMP7Q8WUX9 453 aaPredicted RBP23.38■■□□□ 1.33
HNRNPM-216ENST00000602219 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
HNRNPM-216ENST00000602219 RAPGEF2Q9Y4G8 1499 aa23.35■■□□□ 1.33
HNRNPM-216ENST00000602219 LOC105371045A0A1W2PR82 267 aa23.3■■□□□ 1.32
HNRNPM-216ENST00000602219 KIF21BO75037 1637 aa23.3■■□□□ 1.32
HNRNPM-216ENST00000602219 GRIN2AQ12879 1464 aa23.28■■□□□ 1.32
HNRNPM-216ENST00000602219 GOLGA3Q08378 1498 aa23.25■■□□□ 1.31
HNRNPM-216ENST00000602219 UBTFP17480 764 aaKnown RBP23.22■■□□□ 1.31
HNRNPM-216ENST00000602219 CHD1O14646 1710 aa23.22■■□□□ 1.31
HNRNPM-216ENST00000602219 NUP160Q12769 1436 aa23.15■■□□□ 1.3
HNRNPM-216ENST00000602219 CEP170Q5SW79 1584 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms