RNA–Protein interactions for RNA: ENST00000562743.5

USP10-205, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 2

Gene USP10, Length 888 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-205ENST00000562743 NISCHQ9Y2I1 1504 aa45.85■■■■■ 4.93
USP10-205ENST00000562743 CCDC180Q9P1Z9 1646 aa41.01■■■■■ 4.16
USP10-205ENST00000562743 ABCC9O60706 1549 aa40.79■■■■■ 4.12
USP10-205ENST00000562743 RB1CC1Q8TDY2 1594 aa38.88■■■■□ 3.81
USP10-205ENST00000562743 NACADO15069 1562 aa38.65■■■■□ 3.78
USP10-205ENST00000562743 DCAF8L2P0C7V8 631 aa38.58■■■■□ 3.77
USP10-205ENST00000562743 MYO15BQ96JP2 1530 aa38.17■■■■□ 3.7
USP10-205ENST00000562743 ZCCHC6Q5VYS8 1495 aaKnown RBP38.1■■■■□ 3.69
USP10-205ENST00000562743 UNC13AQ9UPW8 1703 aa38.09■■■■□ 3.69
USP10-205ENST00000562743 PABPN1Q86U42 306 aaKnown RBP eCLIP38■■■■□ 3.67
USP10-205ENST00000562743 DNAJC5BQ9UF47 199 aa37.94■■■■□ 3.66
USP10-205ENST00000562743 DCAF1Q9Y4B6 1507 aa37.82■■■■□ 3.65
USP10-205ENST00000562743 BICRAQ9NZM4 1560 aa37.8■■■■□ 3.64
USP10-205ENST00000562743 SCRIBQ14160 1630 aa37.5■■■■□ 3.59
USP10-205ENST00000562743 SHROOM4Q9ULL8 1493 aa37.19■■■■□ 3.54
USP10-205ENST00000562743 CC2D2AQ9P2K1 1620 aa36.84■■■■□ 3.49
USP10-205ENST00000562743 EIF4G1Q04637 1599 aaKnown RBP36.83■■■■□ 3.49
USP10-205ENST00000562743 CECR2Q9BXF3 1484 aa36.66■■■■□ 3.46
USP10-205ENST00000562743 SMARCA4P51532 1647 aa35.75■■■■□ 3.31
USP10-205ENST00000562743 NCAPD3P42695 1498 aa35.67■■■■□ 3.3
USP10-205ENST00000562743 ATAD2BQ9ULI0 1458 aa35.66■■■■□ 3.3
USP10-205ENST00000562743 BAZ1AQ9NRL2 1556 aaPredicted RBP35.56■■■■□ 3.28
USP10-205ENST00000562743 SMARCA2P51531 1590 aa35.55■■■■□ 3.28
USP10-205ENST00000562743 HMGXB3Q12766 1538 aa35.48■■■■□ 3.27
USP10-205ENST00000562743 MROH2BQ7Z745 1585 aa35.39■■■■□ 3.26
USP10-205ENST00000562743 BAZ1BQ9UIG0 1483 aaKnown RBP35.35■■■■□ 3.25
USP10-205ENST00000562743 PEG3Q9GZU2 1588 aa35.33■■■■□ 3.25
USP10-205ENST00000562743 ERCC6Q03468 1493 aa35.16■■■■□ 3.22
USP10-205ENST00000562743 NESP48681 1621 aa35.14■■■■□ 3.22
USP10-205ENST00000562743 WIZO95785 1651 aa35.01■■■■□ 3.19
USP10-205ENST00000562743 CUX2O14529 1486 aa34.92■■■■□ 3.18
USP10-205ENST00000562743 LAMC3Q9Y6N6 1575 aa34.85■■■■□ 3.17
USP10-205ENST00000562743 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
USP10-205ENST00000562743 THOC2Q8NI27 1593 aaKnown RBP34.72■■■■□ 3.15
USP10-205ENST00000562743 KIF21AQ7Z4S6 1674 aa34.71■■■■□ 3.15
USP10-205ENST00000562743 CADPSQ9ULU8 1353 aa34.61■■■■□ 3.13
USP10-205ENST00000562743 PDS5BQ9NTI5 1447 aa34.6■■■■□ 3.13
USP10-205ENST00000562743 TOP2AP11388 1531 aaKnown RBP34.55■■■■□ 3.12
USP10-205ENST00000562743 DNAJC5Q9H3Z4 198 aa34.51■■■■□ 3.12
USP10-205ENST00000562743 MRC2Q9UBG0 1479 aa34.36■■■■□ 3.09
USP10-205ENST00000562743 CFTRP13569 1480 aa34.3■■■■□ 3.08
USP10-205ENST00000562743 FANCD2Q9BXW9 1451 aa34.28■■■■□ 3.08
USP10-205ENST00000562743 CEP164Q9UPV0 1460 aa34.28■■■■□ 3.08
USP10-205ENST00000562743 WDR62O43379 1518 aa34.27■■■■□ 3.08
USP10-205ENST00000562743 CCDC88BA6NC98 1476 aa34.13■■■■□ 3.05
USP10-205ENST00000562743 PRDM2Q13029 1718 aa34.04■■■■□ 3.04
USP10-205ENST00000562743 URB2Q14146 1524 aaKnown RBP34.01■■■■□ 3.04
USP10-205ENST00000562743 TOPBP1Q92547 1522 aa33.68■■■□□ 2.98
USP10-205ENST00000562743 DNMBPQ6XZF7 1577 aa33.58■■■□□ 2.97
USP10-205ENST00000562743 ZNF608Q9ULD9 1512 aaPredicted RBP33.56■■■□□ 2.96
USP10-205ENST00000562743 IFT140Q96RY7 1462 aa33.56■■■□□ 2.96
USP10-205ENST00000562743 ABCC8Q09428 1581 aa33.51■■■□□ 2.95
USP10-205ENST00000562743 SUPT5HO00267 1087 aaKnown RBP33.46■■■□□ 2.95
USP10-205ENST00000562743 EIF4G3O43432 1585 aaKnown RBP33.4■■■□□ 2.94
USP10-205ENST00000562743 TARBP1Q13395 1621 aaKnown RBP33.36■■■□□ 2.93
USP10-205ENST00000562743 POLA1P09884 1462 aaPredicted RBP33.36■■■□□ 2.93
USP10-205ENST00000562743 OSCARQ8IYS5 282 aa33.33■■■□□ 2.93
USP10-205ENST00000562743 AQRO60306 1485 aaKnown RBP eCLIP33.25■■■□□ 2.914e-6■■□□□ 14.3
USP10-205ENST00000562743 RAD54L2Q9Y4B4 1467 aa33.25■■■□□ 2.91
USP10-205ENST00000562743 TRIM41Q8WV44 630 aa33.25■■■□□ 2.91
USP10-205ENST00000562743 CUX1P39880 1505 aa33.23■■■□□ 2.91
USP10-205ENST00000562743 FGD5Q6ZNL6 1462 aa33.21■■■□□ 2.91
USP10-205ENST00000562743 SOGA1O94964 1423 aa33.15■■■□□ 2.9
USP10-205ENST00000562743 CHD1O14646 1710 aa33.1■■■□□ 2.89
USP10-205ENST00000562743 TDRD9Q8NDG6 1382 aaKnown RBP33.09■■■□□ 2.89
USP10-205ENST00000562743 RIMBP3CA6NJZ7 1639 aa33.01■■■□□ 2.87
USP10-205ENST00000562743 RIMBP3BA6NNM3 1639 aa33.01■■■□□ 2.87
USP10-205ENST00000562743 RIMBP3Q9UFD9 1639 aa33.01■■■□□ 2.87
USP10-205ENST00000562743 WDR97A6NE52 1622 aa32.98■■■□□ 2.87
USP10-205ENST00000562743 FBLN2P98095 1184 aa32.96■■■□□ 2.87
USP10-205ENST00000562743 SNAPC4Q5SXM2 1469 aa32.95■■■□□ 2.87
USP10-205ENST00000562743 ARHGEF11O15085 1522 aa32.92■■■□□ 2.86
USP10-205ENST00000562743 GRIN2BQ13224 1484 aa32.85■■■□□ 2.85
USP10-205ENST00000562743 PBRM1Q86U86 1689 aa32.82■■■□□ 2.84
USP10-205ENST00000562743 MAGI1Q96QZ7 1491 aaPredicted RBP32.8■■■□□ 2.84
USP10-205ENST00000562743 ABCA10Q8WWZ4 1543 aa32.8■■■□□ 2.84
USP10-205ENST00000562743 SYNJ1O43426 1573 aa32.79■■■□□ 2.84
USP10-205ENST00000562743 GAPVD1Q14C86 1478 aa32.78■■■□□ 2.84
USP10-205ENST00000562743 ABCA5Q8WWZ7 1642 aa32.77■■■□□ 2.84
USP10-205ENST00000562743 BIVM-ERCC5R4GMW8 1640 aa32.77■■■□□ 2.84
USP10-205ENST00000562743 WRNQ14191 1432 aaPredicted RBP eCLIP32.76■■■□□ 2.83
USP10-205ENST00000562743 TOP2BQ02880 1626 aa32.75■■■□□ 2.83
USP10-205ENST00000562743 CHMP7Q8WUX9 453 aaPredicted RBP32.71■■■□□ 2.83
USP10-205ENST00000562743 SYNJ2O15056 1496 aa32.71■■■□□ 2.83
USP10-205ENST00000562743 CLASP1Q7Z460 1538 aa32.68■■■□□ 2.82
USP10-205ENST00000562743 ARAP1Q96P48 1450 aa32.63■■■□□ 2.81
USP10-205ENST00000562743 CYB5RLQ6IPT4 315 aa32.6■■■□□ 2.81
USP10-205ENST00000562743 ADAMTS12P58397 1594 aa32.53■■■□□ 2.8
USP10-205ENST00000562743 GRIN2AQ12879 1464 aa32.45■■■□□ 2.79
USP10-205ENST00000562743 ERICH3Q5RHP9 1530 aa32.38■■■□□ 2.77
USP10-205ENST00000562743 CEP170Q5SW79 1584 aa32.37■■■□□ 2.77
USP10-205ENST00000562743 FHAD1B1AJZ9 1412 aa32.36■■■□□ 2.77
USP10-205ENST00000562743 NUP160Q12769 1436 aa32.31■■■□□ 2.76
USP10-205ENST00000562743 ERCC6L2Q5T890 1561 aa32.26■■■□□ 2.75
USP10-205ENST00000562743 SHROOM2Q13796 1616 aa32.15■■■□□ 2.74
USP10-205ENST00000562743 TRHP20396 242 aaPredicted RBP32.15■■■□□ 2.74
USP10-205ENST00000562743 KIF27Q86VH2 1401 aa32.08■■■□□ 2.73
USP10-205ENST00000562743 RUSC2Q8N2Y8 1516 aa32.06■■■□□ 2.72
USP10-205ENST00000562743 IGF1RP08069 1367 aa32.02■■■□□ 2.72
USP10-205ENST00000562743 CUL7Q14999 1698 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms