RNA–Protein interactions for RNA: ENST00000562283.5

USP10-204, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 4

Gene USP10, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-204ENST00000562283 NISCHQ9Y2I1 1504 aa41.67■■■■■ 4.26
USP10-204ENST00000562283 ABCC9O60706 1549 aa38.08■■■■□ 3.69
USP10-204ENST00000562283 CCDC180Q9P1Z9 1646 aa37.64■■■■□ 3.62
USP10-204ENST00000562283 DNAJC5BQ9UF47 199 aa36.2■■■■□ 3.39
USP10-204ENST00000562283 RB1CC1Q8TDY2 1594 aa36.02■■■■□ 3.36
USP10-204ENST00000562283 NACADO15069 1562 aa35.67■■■■□ 3.3
USP10-204ENST00000562283 PABPN1Q86U42 306 aaKnown RBP eCLIP35.34■■■■□ 3.25
USP10-204ENST00000562283 UNC13AQ9UPW8 1703 aa35.32■■■■□ 3.25
USP10-204ENST00000562283 DCAF8L2P0C7V8 631 aa35.25■■■■□ 3.23
USP10-204ENST00000562283 BICRAQ9NZM4 1560 aa35.08■■■■□ 3.21
USP10-204ENST00000562283 MYO15BQ96JP2 1530 aa35.02■■■■□ 3.2
USP10-204ENST00000562283 SHROOM4Q9ULL8 1493 aa34.48■■■■□ 3.11
USP10-204ENST00000562283 ZCCHC6Q5VYS8 1495 aaKnown RBP34.44■■■■□ 3.1
USP10-204ENST00000562283 CC2D2AQ9P2K1 1620 aa34.41■■■■□ 3.1
USP10-204ENST00000562283 DCAF1Q9Y4B6 1507 aa34.4■■■■□ 3.1
USP10-204ENST00000562283 CECR2Q9BXF3 1484 aa34.35■■■■□ 3.09
USP10-204ENST00000562283 SCRIBQ14160 1630 aa34.23■■■■□ 3.07
USP10-204ENST00000562283 EIF4G1Q04637 1599 aaKnown RBP34.21■■■■□ 3.07
USP10-204ENST00000562283 DNAJC5Q9H3Z4 198 aa33.57■■■□□ 2.96
USP10-204ENST00000562283 CUX2O14529 1486 aa33.02■■■□□ 2.88
USP10-204ENST00000562283 NCAPD3P42695 1498 aa32.93■■■□□ 2.86
USP10-204ENST00000562283 ERCC6Q03468 1493 aa32.87■■■□□ 2.85
USP10-204ENST00000562283 ATAD2BQ9ULI0 1458 aa32.77■■■□□ 2.84
USP10-204ENST00000562283 HMGXB3Q12766 1538 aa32.66■■■□□ 2.82
USP10-204ENST00000562283 SMARCA4P51532 1647 aa32.63■■■□□ 2.81
USP10-204ENST00000562283 SMARCA2P51531 1590 aa32.63■■■□□ 2.81
USP10-204ENST00000562283 NESP48681 1621 aa32.6■■■□□ 2.81
USP10-204ENST00000562283 THOC2Q8NI27 1593 aaKnown RBP32.41■■■□□ 2.78
USP10-204ENST00000562283 BAZ1BQ9UIG0 1483 aaKnown RBP32.4■■■□□ 2.78
USP10-204ENST00000562283 BAZ1AQ9NRL2 1556 aaPredicted RBP32.36■■■□□ 2.77
USP10-204ENST00000562283 PEG3Q9GZU2 1588 aa32.33■■■□□ 2.77
USP10-204ENST00000562283 LAMC3Q9Y6N6 1575 aa32.28■■■□□ 2.76
USP10-204ENST00000562283 KIF21AQ7Z4S6 1674 aa32.19■■■□□ 2.74
USP10-204ENST00000562283 MROH2BQ7Z745 1585 aa32.11■■■□□ 2.73
USP10-204ENST00000562283 PDS5BQ9NTI5 1447 aa32.05■■■□□ 2.72
USP10-204ENST00000562283 CADPSQ9ULU8 1353 aa31.88■■■□□ 2.69
USP10-204ENST00000562283 MRC2Q9UBG0 1479 aa31.84■■■□□ 2.69
USP10-204ENST00000562283 TRIM41Q8WV44 630 aa31.83■■■□□ 2.69
USP10-204ENST00000562283 WDR62O43379 1518 aa31.82■■■□□ 2.68
USP10-204ENST00000562283 WIZO95785 1651 aa31.71■■■□□ 2.67
USP10-204ENST00000562283 CEP164Q9UPV0 1460 aa31.6■■■□□ 2.65
USP10-204ENST00000562283 FANCD2Q9BXW9 1451 aa31.53■■■□□ 2.64
USP10-204ENST00000562283 CFTRP13569 1480 aa31.44■■■□□ 2.62
USP10-204ENST00000562283 OSCARQ8IYS5 282 aa31.37■■■□□ 2.61
USP10-204ENST00000562283 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
USP10-204ENST00000562283 TOP2AP11388 1531 aaKnown RBP31.25■■■□□ 2.59
USP10-204ENST00000562283 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
USP10-204ENST00000562283 PRDM2Q13029 1718 aa31.15■■■□□ 2.58
USP10-204ENST00000562283 RIMBP3CA6NJZ7 1639 aa31.12■■■□□ 2.57
USP10-204ENST00000562283 RIMBP3BA6NNM3 1639 aa31.12■■■□□ 2.57
USP10-204ENST00000562283 RIMBP3Q9UFD9 1639 aa31.12■■■□□ 2.57
USP10-204ENST00000562283 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
USP10-204ENST00000562283 IFT140Q96RY7 1462 aa31■■■□□ 2.55
USP10-204ENST00000562283 ARHGEF11O15085 1522 aa30.95■■■□□ 2.55
USP10-204ENST00000562283 TOPBP1Q92547 1522 aa30.9■■■□□ 2.54
USP10-204ENST00000562283 CCDC88BA6NC98 1476 aa30.89■■■□□ 2.54
USP10-204ENST00000562283 EIF4G3O43432 1585 aaKnown RBP30.85■■■□□ 2.53
USP10-204ENST00000562283 ABCC8Q09428 1581 aa30.75■■■□□ 2.51
USP10-204ENST00000562283 DNMBPQ6XZF7 1577 aa30.75■■■□□ 2.51
USP10-204ENST00000562283 CHD1O14646 1710 aa30.73■■■□□ 2.51
USP10-204ENST00000562283 TARBP1Q13395 1621 aaKnown RBP30.7■■■□□ 2.51
USP10-204ENST00000562283 CYB5RLQ6IPT4 315 aa30.68■■■□□ 2.5
USP10-204ENST00000562283 AQRO60306 1485 aaKnown RBP eCLIP30.66■■■□□ 2.54e-6■■□□□ 14.3
USP10-204ENST00000562283 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
USP10-204ENST00000562283 POLA1P09884 1462 aaPredicted RBP30.56■■■□□ 2.48
USP10-204ENST00000562283 FBLN2P98095 1184 aa30.48■■■□□ 2.47
USP10-204ENST00000562283 TRHP20396 242 aaPredicted RBP30.46■■■□□ 2.47
USP10-204ENST00000562283 RAD54L2Q9Y4B4 1467 aa30.44■■■□□ 2.46
USP10-204ENST00000562283 TDRD9Q8NDG6 1382 aaKnown RBP30.38■■■□□ 2.45
USP10-204ENST00000562283 SOGA1O94964 1423 aa30.36■■■□□ 2.45
USP10-204ENST00000562283 CLASP1Q7Z460 1538 aa30.36■■■□□ 2.45
USP10-204ENST00000562283 SNAPC4Q5SXM2 1469 aa30.34■■■□□ 2.45
USP10-204ENST00000562283 WDR97A6NE52 1622 aa30.32■■■□□ 2.44
USP10-204ENST00000562283 FGD5Q6ZNL6 1462 aa30.28■■■□□ 2.44
USP10-204ENST00000562283 SYNJ1O43426 1573 aa30.24■■■□□ 2.43
USP10-204ENST00000562283 MAGI1Q96QZ7 1491 aaPredicted RBP30.23■■■□□ 2.43
USP10-204ENST00000562283 CUX1P39880 1505 aa30.2■■■□□ 2.42
USP10-204ENST00000562283 CHMP7Q8WUX9 453 aaPredicted RBP30.18■■■□□ 2.42
USP10-204ENST00000562283 GRIN2BQ13224 1484 aa30.17■■■□□ 2.42
USP10-204ENST00000562283 SYNJ2O15056 1496 aa30.14■■■□□ 2.42
USP10-204ENST00000562283 PBRM1Q86U86 1689 aa30.07■■■□□ 2.41
USP10-204ENST00000562283 GAPVD1Q14C86 1478 aa30.02■■■□□ 2.4
USP10-204ENST00000562283 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
USP10-204ENST00000562283 AEBP2Q6ZN18 517 aaPredicted RBP29.92■■■□□ 2.38
USP10-204ENST00000562283 ABCA10Q8WWZ4 1543 aa29.91■■■□□ 2.38
USP10-204ENST00000562283 ERCC6L2Q5T890 1561 aa29.86■■■□□ 2.37
USP10-204ENST00000562283 GRIN2AQ12879 1464 aa29.8■■■□□ 2.36
USP10-204ENST00000562283 ADAMTS12P58397 1594 aa29.75■■■□□ 2.35
USP10-204ENST00000562283 CEP170Q5SW79 1584 aa29.75■■■□□ 2.35
USP10-204ENST00000562283 NUP160Q12769 1436 aa29.73■■■□□ 2.35
USP10-204ENST00000562283 SHROOM2Q13796 1616 aa29.7■■■□□ 2.34
USP10-204ENST00000562283 WRNQ14191 1432 aaPredicted RBP eCLIP29.65■■■□□ 2.34
USP10-204ENST00000562283 KIF13AQ9H1H9 1805 aa29.61■■■□□ 2.33
USP10-204ENST00000562283 BIVM-ERCC5R4GMW8 1640 aa29.6■■■□□ 2.33
USP10-204ENST00000562283 FHAD1B1AJZ9 1412 aa29.59■■■□□ 2.33
USP10-204ENST00000562283 TOP2BQ02880 1626 aa29.57■■■□□ 2.32
USP10-204ENST00000562283 ERICH3Q5RHP9 1530 aa29.52■■■□□ 2.32
USP10-204ENST00000562283 PRG4Q92954 1404 aaPredicted RBP29.45■■■□□ 2.3
USP10-204ENST00000562283 SUPT5HO00267 1087 aaKnown RBP29.39■■■□□ 2.3
USP10-204ENST00000562283 JPH4Q96JJ6 628 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms