RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 NISCHQ9Y2I1 1504 aa37.15■■■■□ 3.54
TSPAN4-213ENST00000524895 CCDC180Q9P1Z9 1646 aa32.76■■■□□ 2.83
TSPAN4-213ENST00000524895 ABCC9O60706 1549 aa31.39■■■□□ 2.62
TSPAN4-213ENST00000524895 ZCCHC6Q5VYS8 1495 aaKnown RBP31.11■■■□□ 2.57
TSPAN4-213ENST00000524895 DCAF8L2P0C7V8 631 aa30.78■■■□□ 2.52
TSPAN4-213ENST00000524895 DCAF1Q9Y4B6 1507 aa30.76■■■□□ 2.51
TSPAN4-213ENST00000524895 MYO15BQ96JP2 1530 aa30.63■■■□□ 2.49
TSPAN4-213ENST00000524895 NACADO15069 1562 aa30.61■■■□□ 2.49
TSPAN4-213ENST00000524895 RB1CC1Q8TDY2 1594 aa30.5■■■□□ 2.47
TSPAN4-213ENST00000524895 SCRIBQ14160 1630 aa29.98■■■□□ 2.39
TSPAN4-213ENST00000524895 SHROOM4Q9ULL8 1493 aa29.82■■■□□ 2.36
TSPAN4-213ENST00000524895 UNC13AQ9UPW8 1703 aa29.81■■■□□ 2.36
TSPAN4-213ENST00000524895 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
TSPAN4-213ENST00000524895 PABPN1Q86U42 306 aaKnown RBP eCLIP29.43■■■□□ 2.3
TSPAN4-213ENST00000524895 CECR2Q9BXF3 1484 aa28.86■■■□□ 2.21
TSPAN4-213ENST00000524895 BAZ1AQ9NRL2 1556 aaPredicted RBP28.78■■■□□ 2.2
TSPAN4-213ENST00000524895 EIF4G1Q04637 1599 aaKnown RBP28.71■■■□□ 2.19
TSPAN4-213ENST00000524895 SMARCA4P51532 1647 aa28.71■■■□□ 2.19
TSPAN4-213ENST00000524895 MROH2BQ7Z745 1585 aa28.66■■■□□ 2.18
TSPAN4-213ENST00000524895 RSF1Q96T23 1441 aaPredicted RBP28.56■■■□□ 2.16
TSPAN4-213ENST00000524895 CC2D2AQ9P2K1 1620 aa28.43■■■□□ 2.14
TSPAN4-213ENST00000524895 WIZO95785 1651 aa28.4■■■□□ 2.14
TSPAN4-213ENST00000524895 SUPT5HO00267 1087 aaKnown RBP28.39■■■□□ 2.14
TSPAN4-213ENST00000524895 PEG3Q9GZU2 1588 aa28.39■■■□□ 2.14
TSPAN4-213ENST00000524895 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
TSPAN4-213ENST00000524895 ATAD2BQ9ULI0 1458 aa28.35■■■□□ 2.13
TSPAN4-213ENST00000524895 NCAPD3P42695 1498 aa28.21■■■□□ 2.11
TSPAN4-213ENST00000524895 BAZ1BQ9UIG0 1483 aaKnown RBP28.2■■■□□ 2.1
TSPAN4-213ENST00000524895 HMGXB3Q12766 1538 aa28.18■■■□□ 2.1
TSPAN4-213ENST00000524895 TOP2AP11388 1531 aaKnown RBP28.14■■■□□ 2.1
TSPAN4-213ENST00000524895 DNAJC5BQ9UF47 199 aa28.1■■■□□ 2.09
TSPAN4-213ENST00000524895 CCDC88BA6NC98 1476 aa27.78■■■□□ 2.04
TSPAN4-213ENST00000524895 CADPSQ9ULU8 1353 aa27.44■■□□□ 1.98
TSPAN4-213ENST00000524895 CFTRP13569 1480 aa27.43■■□□□ 1.98
TSPAN4-213ENST00000524895 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.98
TSPAN4-213ENST00000524895 NESP48681 1621 aa27.36■■□□□ 1.97
TSPAN4-213ENST00000524895 PRDM2Q13029 1718 aa27.32■■□□□ 1.96
TSPAN4-213ENST00000524895 PDS5BQ9NTI5 1447 aa27.18■■□□□ 1.94
TSPAN4-213ENST00000524895 FANCD2Q9BXW9 1451 aa27.15■■□□□ 1.94
TSPAN4-213ENST00000524895 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.93
TSPAN4-213ENST00000524895 CEP164Q9UPV0 1460 aa27.07■■□□□ 1.92
TSPAN4-213ENST00000524895 ERCC6Q03468 1493 aa27.03■■□□□ 1.92
TSPAN4-213ENST00000524895 ABCC8Q09428 1581 aa27.01■■□□□ 1.92
TSPAN4-213ENST00000524895 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
TSPAN4-213ENST00000524895 MRC2Q9UBG0 1479 aa26.88■■□□□ 1.89
TSPAN4-213ENST00000524895 CHIC1Q5VXU3 224 aa26.86■■□□□ 1.89
TSPAN4-213ENST00000524895 SYNJ1O43426 1573 aa26.85■■□□□ 1.89
TSPAN4-213ENST00000524895 CUX1P39880 1505 aa26.85■■□□□ 1.89
TSPAN4-213ENST00000524895 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
TSPAN4-213ENST00000524895 URB2Q14146 1524 aaKnown RBP26.83■■□□□ 1.89
TSPAN4-213ENST00000524895 THOC2Q8NI27 1593 aaKnown RBP26.81■■□□□ 1.88
TSPAN4-213ENST00000524895 TOP2BQ02880 1626 aa26.81■■□□□ 1.88
TSPAN4-213ENST00000524895 BIVM-ERCC5R4GMW8 1640 aa26.8■■□□□ 1.88
TSPAN4-213ENST00000524895 TOPBP1Q92547 1522 aa26.8■■□□□ 1.88
TSPAN4-213ENST00000524895 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
TSPAN4-213ENST00000524895 WDR62O43379 1518 aa26.76■■□□□ 1.87
TSPAN4-213ENST00000524895 FGD5Q6ZNL6 1462 aa26.66■■□□□ 1.86
TSPAN4-213ENST00000524895 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
TSPAN4-213ENST00000524895 SOGA1O94964 1423 aa26.5■■□□□ 1.83
TSPAN4-213ENST00000524895 CUX2O14529 1486 aa26.49■■□□□ 1.83
TSPAN4-213ENST00000524895 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
TSPAN4-213ENST00000524895 IFT140Q96RY7 1462 aa26.45■■□□□ 1.82
TSPAN4-213ENST00000524895 TARBP1Q13395 1621 aaKnown RBP26.44■■□□□ 1.82
TSPAN4-213ENST00000524895 ABCA10Q8WWZ4 1543 aa26.42■■□□□ 1.82
TSPAN4-213ENST00000524895 WDR97A6NE52 1622 aa26.42■■□□□ 1.82
TSPAN4-213ENST00000524895 KIF27Q86VH2 1401 aa26.32■■□□□ 1.8
TSPAN4-213ENST00000524895 EEA1Q15075 1411 aa26.28■■□□□ 1.8
TSPAN4-213ENST00000524895 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
TSPAN4-213ENST00000524895 TDRD9Q8NDG6 1382 aaKnown RBP26.27■■□□□ 1.8
TSPAN4-213ENST00000524895 RUSC2Q8N2Y8 1516 aa26.27■■□□□ 1.8
TSPAN4-213ENST00000524895 ZNF608Q9ULD9 1512 aaPredicted RBP26.27■■□□□ 1.8
TSPAN4-213ENST00000524895 EIF4G3O43432 1585 aaKnown RBP26.24■■□□□ 1.79
TSPAN4-213ENST00000524895 FAM9AQ8IZU1 332 aaPredicted RBP26.23■■□□□ 1.79
TSPAN4-213ENST00000524895 GAPVD1Q14C86 1478 aa26.23■■□□□ 1.79
TSPAN4-213ENST00000524895 AQRO60306 1485 aaKnown RBP eCLIP26.21■■□□□ 1.79
TSPAN4-213ENST00000524895 PBRM1Q86U86 1689 aa26.16■■□□□ 1.78
TSPAN4-213ENST00000524895 GRIN2BQ13224 1484 aa26.13■■□□□ 1.77
TSPAN4-213ENST00000524895 ERICH3Q5RHP9 1530 aa26.12■■□□□ 1.77
TSPAN4-213ENST00000524895 CSRNP3Q8WYN3 585 aa26.1■■□□□ 1.77
TSPAN4-213ENST00000524895 IGF1RP08069 1367 aa26.07■■□□□ 1.76
TSPAN4-213ENST00000524895 CUL7Q14999 1698 aa26.05■■□□□ 1.76
TSPAN4-213ENST00000524895 SNAPC4Q5SXM2 1469 aa26.01■■□□□ 1.75
TSPAN4-213ENST00000524895 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
TSPAN4-213ENST00000524895 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
TSPAN4-213ENST00000524895 KIF21BO75037 1637 aa25.97■■□□□ 1.75
TSPAN4-213ENST00000524895 PRXQ9BXM0 1461 aa25.97■■□□□ 1.75
TSPAN4-213ENST00000524895 CARMIL1Q5VZK9 1371 aa25.96■■□□□ 1.75
TSPAN4-213ENST00000524895 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
TSPAN4-213ENST00000524895 RAPGEF2Q9Y4G8 1499 aa25.91■■□□□ 1.74
TSPAN4-213ENST00000524895 SYNJ2O15056 1496 aa25.88■■□□□ 1.73
TSPAN4-213ENST00000524895 GOLGA3Q08378 1498 aa25.88■■□□□ 1.73
TSPAN4-213ENST00000524895 EHMT2Q96KQ7 1210 aa25.85■■□□□ 1.73
TSPAN4-213ENST00000524895 GRIN2AQ12879 1464 aa25.8■■□□□ 1.72
TSPAN4-213ENST00000524895 CHMP7Q8WUX9 453 aaPredicted RBP25.8■■□□□ 1.72
TSPAN4-213ENST00000524895 FBLN2P98095 1184 aa25.78■■□□□ 1.72
TSPAN4-213ENST00000524895 CHD1O14646 1710 aa25.77■■□□□ 1.72
TSPAN4-213ENST00000524895 LOC105371045A0A1W2PR82 267 aa25.76■■□□□ 1.71
TSPAN4-213ENST00000524895 UBTFP17480 764 aaKnown RBP25.73■■□□□ 1.71
TSPAN4-213ENST00000524895 CTTNBP2Q8WZ74 1663 aa25.67■■□□□ 1.7
TSPAN4-213ENST00000524895 CEP170Q5SW79 1584 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms