RNA–Protein interactions for RNA: ENST00000441719.5

KDM3A-205, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 8,741 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-205ENST00000441719 DCAF8L2P0C7V8 631 aa19.08■□□□□ 0.65
KDM3A-205ENST00000441719 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.45
KDM3A-205ENST00000441719 SHROOM4Q9ULL8 1493 aa17.65■□□□□ 0.42
KDM3A-205ENST00000441719 EHMT2Q96KQ7 1210 aa17.61■□□□□ 0.41
KDM3A-205ENST00000441719 NISCHQ9Y2I1 1504 aa17.6■□□□□ 0.41
KDM3A-205ENST00000441719 APLP2Q06481 763 aa16.99■□□□□ 0.31
KDM3A-205ENST00000441719 FAM9AQ8IZU1 332 aaPredicted RBP16.97■□□□□ 0.31
KDM3A-205ENST00000441719 TTBK1Q5TCY1 1321 aaPredicted RBP16.95■□□□□ 0.3
KDM3A-205ENST00000441719 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
KDM3A-205ENST00000441719 PELP1Q8IZL8 1130 aaKnown RBP16.67■□□□□ 0.26
KDM3A-205ENST00000441719 ATP1B4Q9UN42 357 aaPredicted RBP16.67■□□□□ 0.26
KDM3A-205ENST00000441719 PCGF6Q9BYE7 350 aa16.56■□□□□ 0.24
KDM3A-205ENST00000441719 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
KDM3A-205ENST00000441719 UBTFP17480 764 aaKnown RBP16.39■□□□□ 0.21
KDM3A-205ENST00000441719 CCER1Q8TC90 406 aaPredicted RBP16.33■□□□□ 0.21
KDM3A-205ENST00000441719 PPARGC1BQ86YN6 1023 aaKnown RBP16.22■□□□□ 0.19
KDM3A-205ENST00000441719 ERICH6Q7L0X2 663 aa16.16■□□□□ 0.18
KDM3A-205ENST00000441719 CENPBP07199 599 aaPredicted RBP16.1■□□□□ 0.17
KDM3A-205ENST00000441719 ZEB1P37275 1124 aaPredicted RBP16.09■□□□□ 0.17
KDM3A-205ENST00000441719 MYT1LQ9UL68 1186 aa16.09■□□□□ 0.17
KDM3A-205ENST00000441719 YTHDC1Q96MU7 727 aaKnown RBP16.06■□□□□ 0.16
KDM3A-205ENST00000441719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
KDM3A-205ENST00000441719 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
KDM3A-205ENST00000441719 ITGAEP38570 1179 aa15.99■□□□□ 0.15
KDM3A-205ENST00000441719 POLR3GLQ9BT43 218 aa15.92■□□□□ 0.14
KDM3A-205ENST00000441719 NEFLP07196 543 aa15.91■□□□□ 0.14
KDM3A-205ENST00000441719 CHIC1Q5VXU3 224 aa15.88■□□□□ 0.13
KDM3A-205ENST00000441719 CNGB1Q14028 1251 aaPredicted RBP15.82■□□□□ 0.12
KDM3A-205ENST00000441719 LOC105371045A0A1W2PR82 267 aa15.77■□□□□ 0.11
KDM3A-205ENST00000441719 TRIM26Q12899 539 aaPredicted RBP15.73■□□□□ 0.11
KDM3A-205ENST00000441719 SLC4A1APQ9BWU0 796 aaKnown RBP15.68■□□□□ 0.1
KDM3A-205ENST00000441719 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
KDM3A-205ENST00000441719 ABCC9O60706 1549 aa15.58■□□□□ 0.09
KDM3A-205ENST00000441719 FAM50AQ14320 339 aaKnown RBP15.53■□□□□ 0.08
KDM3A-205ENST00000441719 DAXXQ9UER7 740 aaPredicted RBP15.51■□□□□ 0.07
KDM3A-205ENST00000441719 HRCP23327 699 aa15.5■□□□□ 0.07
KDM3A-205ENST00000441719 TRIM52Q96A61 297 aa15.46■□□□□ 0.07
KDM3A-205ENST00000441719 FBLN2P98095 1184 aa15.44■□□□□ 0.06
KDM3A-205ENST00000441719 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
KDM3A-205ENST00000441719 MYT1Q01538 1121 aa15.34■□□□□ 0.05
KDM3A-205ENST00000441719 ZNF326Q5BKZ1 582 aaKnown RBP15.3■□□□□ 0.04
KDM3A-205ENST00000441719 ARID3CA6NKF2 412 aa15.28■□□□□ 0.04
KDM3A-205ENST00000441719 CLSPNQ9HAW4 1339 aa15.28■□□□□ 0.04
KDM3A-205ENST00000441719 P3H3Q8IVL6 736 aa15.24■□□□□ 0.03
KDM3A-205ENST00000441719 DIEXFQ68CQ4 756 aaKnown RBP15.22■□□□□ 0.03
KDM3A-205ENST00000441719 BCANQ96GW7 911 aa15.2■□□□□ 0.02
KDM3A-205ENST00000441719 SLC24A1O60721 1099 aa15.17■□□□□ 0.02
KDM3A-205ENST00000441719 ZNF316A6NFI3 1004 aaPredicted RBP15.17■□□□□ 0.02
KDM3A-205ENST00000441719 BCL11AQ9H165 835 aa15.12■□□□□ 0.01
KDM3A-205ENST00000441719 ZNF777Q9ULD5 760 aaPredicted RBP15.11■□□□□ 0.01
KDM3A-205ENST00000441719 PLPPR3Q6T4P5 718 aa15.07■□□□□ 0
KDM3A-205ENST00000441719 ANP32CO43423 234 aa15.05■□□□□ 0
KDM3A-205ENST00000441719 ZBTB47Q9UFB7 747 aaPredicted RBP15.01□□□□□ -0.01
KDM3A-205ENST00000441719 RTL5Q5HYW3 569 aaPredicted RBP15□□□□□ -0.01
KDM3A-205ENST00000441719 CANXP27824 592 aaKnown RBP14.97□□□□□ -0.01
KDM3A-205ENST00000441719 CHGAP10645 457 aaKnown RBP14.94□□□□□ -0.02
KDM3A-205ENST00000441719 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
KDM3A-205ENST00000441719 ESF1Q9H501 851 aaKnown RBP14.92□□□□□ -0.02
KDM3A-205ENST00000441719 NEFMP07197 916 aa14.91□□□□□ -0.02
KDM3A-205ENST00000441719 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
KDM3A-205ENST00000441719 SCRIBQ14160 1630 aa14.88□□□□□ -0.03
KDM3A-205ENST00000441719 CDK11AQ9UQ88 783 aaPredicted RBP14.85□□□□□ -0.03
KDM3A-205ENST00000441719 GTF3C3Q9Y5Q9 886 aa14.85□□□□□ -0.03
KDM3A-205ENST00000441719 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
KDM3A-205ENST00000441719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.79□□□□□ -0.045e-7■■□□□ 12.9
KDM3A-205ENST00000441719 CHIC2Q9UKJ5 165 aa14.76□□□□□ -0.05
KDM3A-205ENST00000441719 SENP3Q9H4L4 574 aaPredicted RBP14.72□□□□□ -0.05
KDM3A-205ENST00000441719 SALL2Q9Y467 1007 aaPredicted RBP14.7□□□□□ -0.06
KDM3A-205ENST00000441719 NPM2Q86SE8 214 aaKnown RBP14.7□□□□□ -0.06
KDM3A-205ENST00000441719 TONSLQ96HA7 1378 aa14.68□□□□□ -0.06
KDM3A-205ENST00000441719 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
KDM3A-205ENST00000441719 KDM2AQ9Y2K7 1162 aa14.65□□□□□ -0.06
KDM3A-205ENST00000441719 FAM9BQ8IZU0 186 aa14.65□□□□□ -0.06
KDM3A-205ENST00000441719 PLEKHG5O94827 1062 aa14.63□□□□□ -0.07
KDM3A-205ENST00000441719 CHMP7Q8WUX9 453 aaPredicted RBP14.63□□□□□ -0.07
KDM3A-205ENST00000441719 DDX10Q13206 875 aaKnown RBP14.62□□□□□ -0.07
KDM3A-205ENST00000441719 ZBTB7CA1YPR0 619 aa14.58□□□□□ -0.08
KDM3A-205ENST00000441719 A0A0G2JS52 829 aa14.57□□□□□ -0.08
KDM3A-205ENST00000441719 HNRNPUQ00839 825 aaKnown RBP eCLIP14.57□□□□□ -0.08
KDM3A-205ENST00000441719 ANP32AP39687 249 aaKnown RBP14.57□□□□□ -0.08
KDM3A-205ENST00000441719 KCNH8Q96L42 1107 aa14.57□□□□□ -0.08
KDM3A-205ENST00000441719 FKBP8Q14318 412 aa14.56□□□□□ -0.08
KDM3A-205ENST00000441719 TSPY4P0CV99 314 aa14.56□□□□□ -0.08
KDM3A-205ENST00000441719 TSPY10P0CW01 314 aa14.56□□□□□ -0.08
KDM3A-205ENST00000441719 ACIN1Q9UKV3 1341 aaKnown RBP14.52□□□□□ -0.08
KDM3A-205ENST00000441719 MTUS2Q5JR59 1369 aa14.51□□□□□ -0.09
KDM3A-205ENST00000441719 HIRIP3Q9BW71 556 aaPredicted RBP14.51□□□□□ -0.09
KDM3A-205ENST00000441719 TMC1Q8TDI8 760 aa14.51□□□□□ -0.09
KDM3A-205ENST00000441719 HSP90AA1P07900 732 aaKnown RBP14.5□□□□□ -0.09
KDM3A-205ENST00000441719 WDR43Q15061 677 aaKnown RBP eCLIP14.49□□□□□ -0.09
KDM3A-205ENST00000441719 C14orf37Q86TY3 774 aa14.49□□□□□ -0.09
KDM3A-205ENST00000441719 RRP7BPQ9NSQ0 103 aa14.49□□□□□ -0.09
KDM3A-205ENST00000441719 ZCCHC6Q5VYS8 1495 aaKnown RBP14.49□□□□□ -0.09
KDM3A-205ENST00000441719 PPP1R15AO75807 674 aaPredicted RBP14.44□□□□□ -0.1
KDM3A-205ENST00000441719 ARID4BQ4LE39 1312 aaPredicted RBP14.42□□□□□ -0.1
KDM3A-205ENST00000441719 UPF2Q9HAU5 1272 aaKnown RBP14.41□□□□□ -0.1
KDM3A-205ENST00000441719 RGL3Q3MIN7 710 aa14.41□□□□□ -0.1
KDM3A-205ENST00000441719 MRS2Q9HD23 443 aa14.4□□□□□ -0.1
KDM3A-205ENST00000441719 IRX6P78412 446 aaPredicted RBP14.38□□□□□ -0.11
KDM3A-205ENST00000441719 PLEKHD1A6NEE1 506 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms