Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.892e-6■□□□□ 10.9
CSTF2TQ9H0L4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.642e-6■□□□□ 10.9
CSTF2TQ9H0L4 ST3GAL4-214ENST00000531217 1745 ntTSL 518.6■□□□□ 0.572e-6■□□□□ 10.9
CSTF2TQ9H0L4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.512e-6■□□□□ 10.9
CSTF2TQ9H0L4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.492e-6■□□□□ 10.9
CSTF2TQ9H0L4 ST3GAL4-220ENST00000534733 545 ntTSL 517.2■□□□□ 0.342e-6■□□□□ 10.9
CSTF2TQ9H0L4 DDX39A-205ENST00000586993 585 ntTSL 420.77■□□□□ 0.924e-7■□□□□ 10.9
CSTF2TQ9H0L4 DDX39A-207ENST00000588542 1297 ntTSL 318.74■□□□□ 0.594e-7■□□□□ 10.9
CSTF2TQ9H0L4 DDX39A-204ENST00000586558 1127 ntTSL 217.71■□□□□ 0.434e-7■□□□□ 10.9
CSTF2TQ9H0L4 DDX39A-212ENST00000590260 988 ntTSL 216.97■□□□□ 0.314e-7■□□□□ 10.9
CSTF2TQ9H0L4 DDX39A-216ENST00000591275 484 ntTSL 215.2■□□□□ 0.024e-7■□□□□ 10.9
CSTF2TQ9H0L4 DDX39A-209ENST00000589318 1903 ntTSL 1 (best)14.18□□□□□ -0.144e-7■□□□□ 10.9
CSTF2TQ9H0L4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.34e-7■□□□□ 10.9
CSTF2TQ9H0L4 DDX39A-218ENST00000592632 586 ntTSL 212.08□□□□□ -0.484e-7■□□□□ 10.9
CSTF2TQ9H0L4 DDX39A-202ENST00000324340 1355 ntTSL 1 (best)11.54□□□□□ -0.564e-7■□□□□ 10.9
CSTF2TQ9H0L4 DDX39A-210ENST00000589675 829 ntTSL 310.52□□□□□ -0.734e-7■□□□□ 10.9
CSTF2TQ9H0L4 DDX39A-203ENST00000454233 922 ntTSL 3 BASIC10.07□□□□□ -0.84e-7■□□□□ 10.9
CSTF2TQ9H0L4 DDX39A-220ENST00000593008 538 ntTSL 38.87□□□□□ -0.994e-7■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.6■■□□□ 1.532e-10■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-205ENST00000467980 899 ntTSL 324.6■■□□□ 1.532e-10■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-206ENST00000469309 910 ntTSL 223.38■■□□□ 1.332e-10■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-215ENST00000495535 672 ntTSL 321.77■■□□□ 1.082e-10■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-219ENST00000522266 480 ntTSL 221.77■■□□□ 1.082e-10■□□□□ 10.9
CSTF2TQ9H0L4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.68■■□□□ 1.063e-9■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.822e-10■□□□□ 10.9
CSTF2TQ9H0L4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.762e-10■□□□□ 10.9
CSTF2TQ9H0L4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.753e-9■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-213ENST00000488943 1262 ntTSL 519.49■□□□□ 0.712e-10■□□□□ 10.9
CSTF2TQ9H0L4 TMEM165-205ENST00000508404 1657 ntTSL 219.38■□□□□ 0.693e-9■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-208ENST00000475514 1192 ntTSL 519.26■□□□□ 0.672e-10■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-207ENST00000473391 1064 ntTSL 219.09■□□□□ 0.652e-10■□□□□ 10.9
CSTF2TQ9H0L4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.33■□□□□ 0.522e-10■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.49■□□□□ 0.392e-10■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.15■□□□□ 0.342e-10■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.222e-10■□□□□ 10.9
CSTF2TQ9H0L4 FLOT2-207ENST00000581509 426 ntTSL 216.19■□□□□ 0.186e-8■□□□□ 10.9
CSTF2TQ9H0L4 MTG2-207ENST00000471352 785 ntTSL 515.17■□□□□ 0.023e-11■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-218ENST00000519397 583 ntTSL 414.88□□□□□ -0.032e-10■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.44□□□□□ -0.12e-10■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.12e-10■□□□□ 10.9
CSTF2TQ9H0L4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.241e-6■□□□□ 10.9
CSTF2TQ9H0L4 MTG2-206ENST00000467101 2814 ntTSL 1 (best)13.54□□□□□ -0.243e-11■□□□□ 10.9
CSTF2TQ9H0L4 VWCE-201ENST00000301770 3368 ntTSL 1 (best)13.13□□□□□ -0.311e-6■□□□□ 10.9
CSTF2TQ9H0L4 MTG2-202ENST00000448254 727 ntTSL 512.95□□□□□ -0.343e-11■□□□□ 10.9
CSTF2TQ9H0L4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.373e-11■□□□□ 10.9
CSTF2TQ9H0L4 MTG2-205ENST00000466933 667 ntTSL 311.78□□□□□ -0.523e-11■□□□□ 10.9
CSTF2TQ9H0L4 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC11.53□□□□□ -0.561e-6■□□□□ 10.9
CSTF2TQ9H0L4 FLOT2-203ENST00000465427 746 ntTSL 511.06□□□□□ -0.646e-8■□□□□ 10.9
CSTF2TQ9H0L4 PRKACA-202ENST00000350356 3105 ntTSL 29.4□□□□□ -0.92e-10■□□□□ 10.9
CSTF2TQ9H0L4 REPIN1-212ENST00000487455 464 ntTSL 48.96□□□□□ -0.982e-10■□□□□ 10.9
CSTF2TQ9H0L4 FLOT2-205ENST00000580313 429 ntTSL 37.51□□□□□ -1.216e-8■□□□□ 10.9
CSTF2TQ9H0L4 TMEM165-208ENST00000511710 731 ntTSL 36.78□□□□□ -1.323e-9■□□□□ 10.9
CSTF2TQ9H0L4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.2■□□□□ 0.663e-9■□□□□ 10.9
CSTF2TQ9H0L4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.453e-9■□□□□ 10.9
CSTF2TQ9H0L4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.69■□□□□ 0.263e-9■□□□□ 10.9
CSTF2TQ9H0L4 SCARB1-205ENST00000538291 5527 ntTSL 516.31■□□□□ 0.23e-9■□□□□ 10.9
CSTF2TQ9H0L4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15□□□□□ -0.013e-9■□□□□ 10.9
CSTF2TQ9H0L4 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.065e-86■□□□□ 10.9
CSTF2TQ9H0L4 CABIN1-212ENST00000495121 361 ntTSL 512.31□□□□□ -0.446e-8■□□□□ 10.9
CSTF2TQ9H0L4 KIF2A-209ENST00000512541 549 ntTSL 415.65■□□□□ 0.12e-6■□□□□ 10.9
CSTF2TQ9H0L4 CPEB1-205ENST00000569257 527 ntTSL 419.97■□□□□ 0.796e-8■□□□□ 10.9
CSTF2TQ9H0L4 PCBP2-207ENST00000546463 1457 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.969e-79■□□□□ 10.9
CSTF2TQ9H0L4 CLMN-204ENST00000555615 685 ntTSL 58.54□□□□□ -1.041e-6■□□□□ 10.9
CSTF2TQ9H0L4 ENPP1-203ENST00000486853 732 ntTSL 228■■■□□ 2.074e-7■□□□□ 10.9
CSTF2TQ9H0L4 ENPP1-204ENST00000513998 3107 ntTSL 518.63■□□□□ 0.574e-7■□□□□ 10.9
CSTF2TQ9H0L4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.244e-7■□□□□ 10.9
CSTF2TQ9H0L4 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.752e-8■□□□□ 10.9
CSTF2TQ9H0L4 ZNF316-202ENST00000427912 520 ntTSL 313.41□□□□□ -0.262e-6■□□□□ 10.9
CSTF2TQ9H0L4 CENPJ-203ENST00000471870 501 ntTSL 36.74□□□□□ -1.333e-7■□□□□ 10.9
CSTF2TQ9H0L4 RREB1-207ENST00000475946 9067 ntTSL 1 (best)8.19□□□□□ -1.17e-8■□□□□ 10.9
CSTF2TQ9H0L4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.47■■□□□ 1.033e-6■□□□□ 10.9
CSTF2TQ9H0L4 ARPC4-202ENST00000417500 957 ntTSL 518.49■□□□□ 0.553e-6■□□□□ 10.9
CSTF2TQ9H0L4 ARPC4-204ENST00000440787 910 ntTSL 318.39■□□□□ 0.533e-6■□□□□ 10.9
CSTF2TQ9H0L4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.223e-6■□□□□ 10.9
CSTF2TQ9H0L4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.88■□□□□ 0.133e-6■□□□□ 10.9
CSTF2TQ9H0L4 AC139887.2-203ENST00000503185 618 ntTSL 2 BASIC9.91□□□□□ -0.826e-11■□□□□ 10.8
CSTF2TQ9H0L4 AC139887.2-204ENST00000503405 550 ntTSL 3 BASIC9.91□□□□□ -0.826e-11■□□□□ 10.8
CSTF2TQ9H0L4 PEPD-212ENST00000593163 1045 ntTSL 217.41■□□□□ 0.382e-6■□□□□ 10.8
CSTF2TQ9H0L4 RBM4-207ENST00000506523 654 ntTSL 3 BASIC12.49□□□□□ -0.412e-9■□□□□ 10.8
CSTF2TQ9H0L4 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC11.6□□□□□ -0.552e-9■□□□□ 10.8
CSTF2TQ9H0L4 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.73□□□□□ -1.332e-9■□□□□ 10.8
CSTF2TQ9H0L4 MFSD12-214ENST00000615073 986 ntTSL 319.36■□□□□ 0.697e-8■□□□□ 10.8
CSTF2TQ9H0L4 MFSD12-203ENST00000398558 1014 ntTSL 217.89■□□□□ 0.457e-8■□□□□ 10.8
CSTF2TQ9H0L4 CARD10-204ENST00000433485 578 ntTSL 418.44■□□□□ 0.542e-6■□□□□ 10.8
CSTF2TQ9H0L4 TAF15-210ENST00000604694 891 ntTSL 516.12■□□□□ 0.176e-9■□□□□ 10.8
CSTF2TQ9H0L4 LRCH4-205ENST00000485554 774 ntTSL 316.94■□□□□ 0.33e-8■□□□□ 10.8
CSTF2TQ9H0L4 PTPRK-217ENST00000524534 2441 ntTSL 510.77□□□□□ -0.687e-8■□□□□ 10.8
CSTF2TQ9H0L4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.75■□□□□ 0.752e-8■□□□□ 10.8
CSTF2TQ9H0L4 COLGALT1-203ENST00000597075 737 ntTSL 215.4■□□□□ 0.062e-8■□□□□ 10.8
CSTF2TQ9H0L4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.41□□□□□ -0.262e-8■□□□□ 10.8
CSTF2TQ9H0L4 SRSF10-212ENST00000485292 790 ntTSL 213.29□□□□□ -0.282e-8■□□□□ 10.8
CSTF2TQ9H0L4 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.312e-8■□□□□ 10.8
CSTF2TQ9H0L4 COLGALT1-204ENST00000597147 654 ntAPPRIS ALT2 TSL 513□□□□□ -0.332e-8■□□□□ 10.8
CSTF2TQ9H0L4 SRSF10-202ENST00000341154 2839 ntTSL 211.13□□□□□ -0.632e-8■□□□□ 10.8
CSTF2TQ9H0L4 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC11.09□□□□□ -0.632e-8■□□□□ 10.8
CSTF2TQ9H0L4 SRSF10-203ENST00000343255 2917 ntAPPRIS ALT1 TSL 2 BASIC10.01□□□□□ -0.812e-8■□□□□ 10.8
CSTF2TQ9H0L4 SRSF10-214ENST00000492112 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.852e-8■□□□□ 10.8
CSTF2TQ9H0L4 SRSF10-206ENST00000374453 866 ntTSL 5 BASIC9.13□□□□□ -0.952e-8■□□□□ 10.8
CSTF2TQ9H0L4 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC8.69□□□□□ -1.022e-8■□□□□ 10.8
CSTF2TQ9H0L4 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC8.26□□□□□ -1.092e-8■□□□□ 10.8
Retrieved 100 of 19,151 protein–RNA pairs in 248.2 ms