RNA–Protein interactions for RNA: ENST00000440787.5

ARPC4-204, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 3

Gene ARPC4, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-204ENST00000440787 NISCHQ9Y2I1 1504 aa48.16■■■■■ 5.3
ARPC4-204ENST00000440787 CCDC180Q9P1Z9 1646 aa42.96■■■■■ 4.47
ARPC4-204ENST00000440787 ABCC9O60706 1549 aa42.11■■■■■ 4.33
ARPC4-204ENST00000440787 RB1CC1Q8TDY2 1594 aa40.48■■■■■ 4.07
ARPC4-204ENST00000440787 NACADO15069 1562 aa40.38■■■■■ 4.05
ARPC4-204ENST00000440787 DCAF8L2P0C7V8 631 aa40.21■■■■■ 4.03
ARPC4-204ENST00000440787 ZCCHC6Q5VYS8 1495 aaKnown RBP40.11■■■■■ 4.01
ARPC4-204ENST00000440787 MYO15BQ96JP2 1530 aa40.08■■■■■ 4.01
ARPC4-204ENST00000440787 DCAF1Q9Y4B6 1507 aa39.86■■■■□ 3.97
ARPC4-204ENST00000440787 UNC13AQ9UPW8 1703 aa39.6■■■■□ 3.93
ARPC4-204ENST00000440787 PABPN1Q86U42 306 aaKnown RBP eCLIP39.27■■■■□ 3.88
ARPC4-204ENST00000440787 BICRAQ9NZM4 1560 aa39.25■■■■□ 3.87
ARPC4-204ENST00000440787 SCRIBQ14160 1630 aa39.15■■■■□ 3.86
ARPC4-204ENST00000440787 SHROOM4Q9ULL8 1493 aa38.85■■■■□ 3.81
ARPC4-204ENST00000440787 DNAJC5BQ9UF47 199 aa38.73■■■■□ 3.79
ARPC4-204ENST00000440787 EIF4G1Q04637 1599 aaKnown RBP38.23■■■■□ 3.71
ARPC4-204ENST00000440787 CC2D2AQ9P2K1 1620 aa38.12■■■■□ 3.69
ARPC4-204ENST00000440787 CECR2Q9BXF3 1484 aa37.86■■■■□ 3.65
ARPC4-204ENST00000440787 SMARCA4P51532 1647 aa37.44■■■■□ 3.58
ARPC4-204ENST00000440787 BAZ1AQ9NRL2 1556 aaPredicted RBP37.36■■■■□ 3.57
ARPC4-204ENST00000440787 NCAPD3P42695 1498 aa37.23■■■■□ 3.55
ARPC4-204ENST00000440787 ATAD2BQ9ULI0 1458 aa37.23■■■■□ 3.55
ARPC4-204ENST00000440787 SMARCA2P51531 1590 aa37.21■■■■□ 3.55
ARPC4-204ENST00000440787 MROH2BQ7Z745 1585 aa37.11■■■■□ 3.53
ARPC4-204ENST00000440787 HMGXB3Q12766 1538 aa37.09■■■■□ 3.53
ARPC4-204ENST00000440787 PEG3Q9GZU2 1588 aa37.07■■■■□ 3.52
ARPC4-204ENST00000440787 BAZ1BQ9UIG0 1483 aaKnown RBP36.94■■■■□ 3.5
ARPC4-204ENST00000440787 WIZO95785 1651 aa36.73■■■■□ 3.47
ARPC4-204ENST00000440787 RSF1Q96T23 1441 aaPredicted RBP36.61■■■■□ 3.45
ARPC4-204ENST00000440787 NESP48681 1621 aa36.4■■■■□ 3.42
ARPC4-204ENST00000440787 TOP2AP11388 1531 aaKnown RBP36.34■■■■□ 3.41
ARPC4-204ENST00000440787 ERCC6Q03468 1493 aa36.32■■■■□ 3.41
ARPC4-204ENST00000440787 LAMC3Q9Y6N6 1575 aa36.32■■■■□ 3.4
ARPC4-204ENST00000440787 CADPSQ9ULU8 1353 aa36.13■■■■□ 3.37
ARPC4-204ENST00000440787 PDS5BQ9NTI5 1447 aa36.04■■■■□ 3.36
ARPC4-204ENST00000440787 KIF21AQ7Z4S6 1674 aa36.02■■■■□ 3.36
ARPC4-204ENST00000440787 CUX2O14529 1486 aa36■■■■□ 3.35
ARPC4-204ENST00000440787 THOC2Q8NI27 1593 aaKnown RBP35.93■■■■□ 3.34
ARPC4-204ENST00000440787 CFTRP13569 1480 aa35.9■■■■□ 3.34
ARPC4-204ENST00000440787 CCDC88BA6NC98 1476 aa35.86■■■■□ 3.33
ARPC4-204ENST00000440787 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
ARPC4-204ENST00000440787 CEP164Q9UPV0 1460 aa35.73■■■■□ 3.31
ARPC4-204ENST00000440787 MRC2Q9UBG0 1479 aa35.71■■■■□ 3.31
ARPC4-204ENST00000440787 PRDM2Q13029 1718 aa35.71■■■■□ 3.31
ARPC4-204ENST00000440787 WDR62O43379 1518 aa35.62■■■■□ 3.29
ARPC4-204ENST00000440787 SUPT5HO00267 1087 aaKnown RBP35.51■■■■□ 3.28
ARPC4-204ENST00000440787 URB2Q14146 1524 aaKnown RBP35.4■■■■□ 3.26
ARPC4-204ENST00000440787 TOPBP1Q92547 1522 aa35.16■■■■□ 3.22
ARPC4-204ENST00000440787 ABCC8Q09428 1581 aa35.13■■■■□ 3.21
ARPC4-204ENST00000440787 DNMBPQ6XZF7 1577 aa35.13■■■■□ 3.21
ARPC4-204ENST00000440787 DNAJC5Q9H3Z4 198 aa35.02■■■■□ 3.2
ARPC4-204ENST00000440787 IFT140Q96RY7 1462 aa34.97■■■■□ 3.19
ARPC4-204ENST00000440787 POLA1P09884 1462 aaPredicted RBP34.84■■■■□ 3.17
ARPC4-204ENST00000440787 CUX1P39880 1505 aa34.84■■■■□ 3.17
ARPC4-204ENST00000440787 ZNF608Q9ULD9 1512 aaPredicted RBP34.81■■■■□ 3.16
ARPC4-204ENST00000440787 TARBP1Q13395 1621 aaKnown RBP34.81■■■■□ 3.16
ARPC4-204ENST00000440787 FGD5Q6ZNL6 1462 aa34.74■■■■□ 3.15
ARPC4-204ENST00000440787 EIF4G3O43432 1585 aaKnown RBP34.73■■■■□ 3.15
ARPC4-204ENST00000440787 RAD54L2Q9Y4B4 1467 aa34.68■■■■□ 3.14
ARPC4-204ENST00000440787 SOGA1O94964 1423 aa34.66■■■■□ 3.14
ARPC4-204ENST00000440787 AQRO60306 1485 aaKnown RBP eCLIP34.58■■■■□ 3.133e-6■■■■□ 22.1
ARPC4-204ENST00000440787 WDR97A6NE52 1622 aa34.55■■■■□ 3.12
ARPC4-204ENST00000440787 WRNQ14191 1432 aaPredicted RBP eCLIP34.54■■■■□ 3.12
ARPC4-204ENST00000440787 BIVM-ERCC5R4GMW8 1640 aa34.52■■■■□ 3.12
ARPC4-204ENST00000440787 TOP2BQ02880 1626 aa34.51■■■■□ 3.11
ARPC4-204ENST00000440787 SYNJ1O43426 1573 aa34.49■■■■□ 3.11
ARPC4-204ENST00000440787 TDRD9Q8NDG6 1382 aaKnown RBP34.49■■■■□ 3.11
ARPC4-204ENST00000440787 OSCARQ8IYS5 282 aa34.42■■■■□ 3.1
ARPC4-204ENST00000440787 ABCA10Q8WWZ4 1543 aa34.4■■■■□ 3.1
ARPC4-204ENST00000440787 CHD1O14646 1710 aa34.33■■■■□ 3.09
ARPC4-204ENST00000440787 ABCA5Q8WWZ7 1642 aa34.31■■■■□ 3.08
ARPC4-204ENST00000440787 GRIN2BQ13224 1484 aa34.31■■■■□ 3.08
ARPC4-204ENST00000440787 PBRM1Q86U86 1689 aa34.29■■■■□ 3.08
ARPC4-204ENST00000440787 GAPVD1Q14C86 1478 aa34.29■■■■□ 3.08
ARPC4-204ENST00000440787 SNAPC4Q5SXM2 1469 aa34.29■■■■□ 3.08
ARPC4-204ENST00000440787 MAGI1Q96QZ7 1491 aaPredicted RBP34.25■■■■□ 3.07
ARPC4-204ENST00000440787 FBLN2P98095 1184 aa34.17■■■■□ 3.06
ARPC4-204ENST00000440787 SYNJ2O15056 1496 aa34.11■■■■□ 3.05
ARPC4-204ENST00000440787 CHMP7Q8WUX9 453 aaPredicted RBP34.06■■■■□ 3.04
ARPC4-204ENST00000440787 ADAMTS12P58397 1594 aa34■■■■□ 3.03
ARPC4-204ENST00000440787 ERICH3Q5RHP9 1530 aa33.99■■■■□ 3.03
ARPC4-204ENST00000440787 RIMBP3CA6NJZ7 1639 aa33.97■■■■□ 3.03
ARPC4-204ENST00000440787 RIMBP3BA6NNM3 1639 aa33.97■■■■□ 3.03
ARPC4-204ENST00000440787 RIMBP3Q9UFD9 1639 aa33.97■■■■□ 3.03
ARPC4-204ENST00000440787 ARHGEF11O15085 1522 aa33.94■■■■□ 3.02
ARPC4-204ENST00000440787 CLASP1Q7Z460 1538 aa33.94■■■■□ 3.02
ARPC4-204ENST00000440787 GRIN2AQ12879 1464 aa33.88■■■■□ 3.01
ARPC4-204ENST00000440787 FHAD1B1AJZ9 1412 aa33.88■■■■□ 3.01
ARPC4-204ENST00000440787 KIF27Q86VH2 1401 aa33.82■■■■□ 3
ARPC4-204ENST00000440787 TRIM41Q8WV44 630 aa33.81■■■■□ 3
ARPC4-204ENST00000440787 CEP170Q5SW79 1584 aa33.73■■■□□ 2.99
ARPC4-204ENST00000440787 NUP160Q12769 1436 aa33.73■■■□□ 2.99
ARPC4-204ENST00000440787 CUL7Q14999 1698 aa33.68■■■□□ 2.98
ARPC4-204ENST00000440787 IGF1RP08069 1367 aa33.67■■■□□ 2.98
ARPC4-204ENST00000440787 ARAP1Q96P48 1450 aa33.64■■■□□ 2.98
ARPC4-204ENST00000440787 CYB5RLQ6IPT4 315 aa33.55■■■□□ 2.96
ARPC4-204ENST00000440787 SHROOM2Q13796 1616 aa33.53■■■□□ 2.96
ARPC4-204ENST00000440787 RUSC2Q8N2Y8 1516 aa33.5■■■□□ 2.95
ARPC4-204ENST00000440787 CARMIL1Q5VZK9 1371 aa33.47■■■□□ 2.95
ARPC4-204ENST00000440787 ERCC6L2Q5T890 1561 aa33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms