RNA–Protein interactions for RNA: ENST00000597147.1

COLGALT1-204, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS ALT2 TSL 5

Gene COLGALT1, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-204ENST00000597147 NISCHQ9Y2I1 1504 aa34.3■■■■□ 3.08
COLGALT1-204ENST00000597147 ABCC9O60706 1549 aa30.98■■■□□ 2.55
COLGALT1-204ENST00000597147 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.54
COLGALT1-204ENST00000597147 RB1CC1Q8TDY2 1594 aa29.48■■■□□ 2.31
COLGALT1-204ENST00000597147 NACADO15069 1562 aa29.22■■■□□ 2.27
COLGALT1-204ENST00000597147 DNAJC5BQ9UF47 199 aa29.1■■■□□ 2.25
COLGALT1-204ENST00000597147 DCAF8L2P0C7V8 631 aa28.96■■■□□ 2.23
COLGALT1-204ENST00000597147 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
COLGALT1-204ENST00000597147 PABPN1Q86U42 306 aaKnown RBP eCLIP28.76■■■□□ 2.19
COLGALT1-204ENST00000597147 MYO15BQ96JP2 1530 aa28.75■■■□□ 2.19
COLGALT1-204ENST00000597147 BICRAQ9NZM4 1560 aa28.6■■■□□ 2.17
COLGALT1-204ENST00000597147 ZCCHC6Q5VYS8 1495 aaKnown RBP28.4■■■□□ 2.14
COLGALT1-204ENST00000597147 DCAF1Q9Y4B6 1507 aa28.33■■■□□ 2.13
COLGALT1-204ENST00000597147 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
COLGALT1-204ENST00000597147 SCRIBQ14160 1630 aa28.14■■■□□ 2.09
COLGALT1-204ENST00000597147 CC2D2AQ9P2K1 1620 aa28.02■■■□□ 2.08
COLGALT1-204ENST00000597147 CECR2Q9BXF3 1484 aa27.92■■■□□ 2.06
COLGALT1-204ENST00000597147 EIF4G1Q04637 1599 aaKnown RBP27.91■■■□□ 2.06
COLGALT1-204ENST00000597147 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
COLGALT1-204ENST00000597147 DNAJC5Q9H3Z4 198 aa26.86■■□□□ 1.89
COLGALT1-204ENST00000597147 SMARCA4P51532 1647 aa26.83■■□□□ 1.89
COLGALT1-204ENST00000597147 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
COLGALT1-204ENST00000597147 SMARCA2P51531 1590 aa26.8■■□□□ 1.88
COLGALT1-204ENST00000597147 ERCC6Q03468 1493 aa26.79■■□□□ 1.88
COLGALT1-204ENST00000597147 CUX2O14529 1486 aa26.78■■□□□ 1.88
COLGALT1-204ENST00000597147 HMGXB3Q12766 1538 aa26.77■■□□□ 1.88
COLGALT1-204ENST00000597147 BAZ1AQ9NRL2 1556 aaPredicted RBP26.66■■□□□ 1.86
COLGALT1-204ENST00000597147 BAZ1BQ9UIG0 1483 aaKnown RBP26.6■■□□□ 1.85
COLGALT1-204ENST00000597147 NESP48681 1621 aa26.57■■□□□ 1.84
COLGALT1-204ENST00000597147 PEG3Q9GZU2 1588 aa26.55■■□□□ 1.84
COLGALT1-204ENST00000597147 MROH2BQ7Z745 1585 aa26.41■■□□□ 1.82
COLGALT1-204ENST00000597147 LAMC3Q9Y6N6 1575 aa26.41■■□□□ 1.82
COLGALT1-204ENST00000597147 THOC2Q8NI27 1593 aaKnown RBP26.39■■□□□ 1.82
COLGALT1-204ENST00000597147 KIF21AQ7Z4S6 1674 aa26.33■■□□□ 1.81
COLGALT1-204ENST00000597147 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
COLGALT1-204ENST00000597147 WIZO95785 1651 aa26.15■■□□□ 1.78
COLGALT1-204ENST00000597147 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.77
COLGALT1-204ENST00000597147 MRC2Q9UBG0 1479 aa26.01■■□□□ 1.75
COLGALT1-204ENST00000597147 WDR62O43379 1518 aa25.97■■□□□ 1.75
COLGALT1-204ENST00000597147 CEP164Q9UPV0 1460 aa25.9■■□□□ 1.74
COLGALT1-204ENST00000597147 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.73
COLGALT1-204ENST00000597147 RSF1Q96T23 1441 aaPredicted RBP25.79■■□□□ 1.72
COLGALT1-204ENST00000597147 CFTRP13569 1480 aa25.79■■□□□ 1.72
COLGALT1-204ENST00000597147 TOP2AP11388 1531 aaKnown RBP25.78■■□□□ 1.72
COLGALT1-204ENST00000597147 PRDM2Q13029 1718 aa25.7■■□□□ 1.7
COLGALT1-204ENST00000597147 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
COLGALT1-204ENST00000597147 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
COLGALT1-204ENST00000597147 OSCARQ8IYS5 282 aa25.48■■□□□ 1.67
COLGALT1-204ENST00000597147 CCDC88BA6NC98 1476 aa25.46■■□□□ 1.67
COLGALT1-204ENST00000597147 IFT140Q96RY7 1462 aa25.36■■□□□ 1.65
COLGALT1-204ENST00000597147 TOPBP1Q92547 1522 aa25.33■■□□□ 1.65
COLGALT1-204ENST00000597147 ZNF608Q9ULD9 1512 aaPredicted RBP25.32■■□□□ 1.64
COLGALT1-204ENST00000597147 ABCC8Q09428 1581 aa25.27■■□□□ 1.64
COLGALT1-204ENST00000597147 DNMBPQ6XZF7 1577 aa25.26■■□□□ 1.63
COLGALT1-204ENST00000597147 RIMBP3CA6NJZ7 1639 aa25.26■■□□□ 1.63
COLGALT1-204ENST00000597147 RIMBP3BA6NNM3 1639 aa25.26■■□□□ 1.63
COLGALT1-204ENST00000597147 RIMBP3Q9UFD9 1639 aa25.26■■□□□ 1.63
COLGALT1-204ENST00000597147 EIF4G3O43432 1585 aaKnown RBP25.25■■□□□ 1.63
COLGALT1-204ENST00000597147 TARBP1Q13395 1621 aaKnown RBP25.15■■□□□ 1.62
COLGALT1-204ENST00000597147 CHD1O14646 1710 aa25.14■■□□□ 1.61
COLGALT1-204ENST00000597147 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
COLGALT1-204ENST00000597147 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.61e-8■■■■□ 22.2
COLGALT1-204ENST00000597147 POLA1P09884 1462 aaPredicted RBP25.06■■□□□ 1.6
COLGALT1-204ENST00000597147 RAD54L2Q9Y4B4 1467 aa24.95■■□□□ 1.58
COLGALT1-204ENST00000597147 SUPT5HO00267 1087 aaKnown RBP24.93■■□□□ 1.58
COLGALT1-204ENST00000597147 FBLN2P98095 1184 aa24.93■■□□□ 1.58
COLGALT1-204ENST00000597147 SOGA1O94964 1423 aa24.92■■□□□ 1.58
COLGALT1-204ENST00000597147 WDR97A6NE52 1622 aa24.91■■□□□ 1.58
COLGALT1-204ENST00000597147 CYB5RLQ6IPT4 315 aa24.89■■□□□ 1.58
COLGALT1-204ENST00000597147 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.57
COLGALT1-204ENST00000597147 TDRD9Q8NDG6 1382 aaKnown RBP24.87■■□□□ 1.57
COLGALT1-204ENST00000597147 ARAP1Q96P48 1450 aa24.85■■□□□ 1.57
COLGALT1-204ENST00000597147 CUX1P39880 1505 aa24.84■■□□□ 1.57
COLGALT1-204ENST00000597147 SNAPC4Q5SXM2 1469 aa24.83■■□□□ 1.56
COLGALT1-204ENST00000597147 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
COLGALT1-204ENST00000597147 CLASP1Q7Z460 1538 aa24.76■■□□□ 1.55
COLGALT1-204ENST00000597147 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
COLGALT1-204ENST00000597147 GRIN2BQ13224 1484 aa24.75■■□□□ 1.55
COLGALT1-204ENST00000597147 PBRM1Q86U86 1689 aa24.75■■□□□ 1.55
COLGALT1-204ENST00000597147 CHMP7Q8WUX9 453 aaPredicted RBP24.71■■□□□ 1.55
COLGALT1-204ENST00000597147 TRHP20396 242 aaPredicted RBP24.69■■□□□ 1.54
COLGALT1-204ENST00000597147 SYNJ2O15056 1496 aa24.69■■□□□ 1.54
COLGALT1-204ENST00000597147 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.53
COLGALT1-204ENST00000597147 ABCA5Q8WWZ7 1642 aa24.62■■□□□ 1.53
COLGALT1-204ENST00000597147 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
COLGALT1-204ENST00000597147 BIVM-ERCC5R4GMW8 1640 aa24.47■■□□□ 1.51
COLGALT1-204ENST00000597147 WRNQ14191 1432 aaPredicted RBP eCLIP24.45■■□□□ 1.51
COLGALT1-204ENST00000597147 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
COLGALT1-204ENST00000597147 ADAMTS12P58397 1594 aa24.43■■□□□ 1.5
COLGALT1-204ENST00000597147 GRIN2AQ12879 1464 aa24.43■■□□□ 1.5
COLGALT1-204ENST00000597147 CEP170Q5SW79 1584 aa24.37■■□□□ 1.49
COLGALT1-204ENST00000597147 ERCC6L2Q5T890 1561 aa24.35■■□□□ 1.49
COLGALT1-204ENST00000597147 NUP160Q12769 1436 aa24.33■■□□□ 1.49
COLGALT1-204ENST00000597147 SHROOM2Q13796 1616 aa24.31■■□□□ 1.48
COLGALT1-204ENST00000597147 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
COLGALT1-204ENST00000597147 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
COLGALT1-204ENST00000597147 PRG4Q92954 1404 aaPredicted RBP24.11■■□□□ 1.45
COLGALT1-204ENST00000597147 KIF13AQ9H1H9 1805 aa24.11■■□□□ 1.45
COLGALT1-204ENST00000597147 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
COLGALT1-204ENST00000597147 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms