RNA–Protein interactions for RNA: ENST00000613271.4

VWCE-208, Transcript of von Willebrand factor C and EGF domains, humanhuman

TSL 5 BASIC

Gene VWCE, Length 3,032 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWCE-208ENST00000613271 NISCHQ9Y2I1 1504 aa22.71■■□□□ 1.23
VWCE-208ENST00000613271 SHROOM4Q9ULL8 1493 aa20.48■□□□□ 0.87
VWCE-208ENST00000613271 SUPT5HO00267 1087 aaKnown RBP20.41■□□□□ 0.86
VWCE-208ENST00000613271 HRCP23327 699 aa20.33■□□□□ 0.84
VWCE-208ENST00000613271 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
VWCE-208ENST00000613271 PCGF6Q9BYE7 350 aa20.19■□□□□ 0.82
VWCE-208ENST00000613271 MYO15BQ96JP2 1530 aa19.9■□□□□ 0.78
VWCE-208ENST00000613271 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
VWCE-208ENST00000613271 LOC105371045A0A1W2PR82 267 aa19.61■□□□□ 0.73
VWCE-208ENST00000613271 CCDC180Q9P1Z9 1646 aa19.51■□□□□ 0.71
VWCE-208ENST00000613271 DCAF8L2P0C7V8 631 aa19.45■□□□□ 0.7
VWCE-208ENST00000613271 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
VWCE-208ENST00000613271 PELP1Q8IZL8 1130 aaKnown RBP19.3■□□□□ 0.68
VWCE-208ENST00000613271 TRIM26Q12899 539 aaPredicted RBP19.28■□□□□ 0.68
VWCE-208ENST00000613271 ZCCHC6Q5VYS8 1495 aaKnown RBP19.2■□□□□ 0.66
VWCE-208ENST00000613271 DCAF1Q9Y4B6 1507 aa19.16■□□□□ 0.66
VWCE-208ENST00000613271 EHMT2Q96KQ7 1210 aa19.12■□□□□ 0.65
VWCE-208ENST00000613271 FAM9AQ8IZU1 332 aaPredicted RBP18.98■□□□□ 0.63
VWCE-208ENST00000613271 ZEB1P37275 1124 aaPredicted RBP18.96■□□□□ 0.63
VWCE-208ENST00000613271 NEUROD1Q13562 356 aa18.86■□□□□ 0.61
VWCE-208ENST00000613271 ACIN1Q9UKV3 1341 aaKnown RBP18.78■□□□□ 0.6
VWCE-208ENST00000613271 GTF3C3Q9Y5Q9 886 aa18.76■□□□□ 0.59
VWCE-208ENST00000613271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.74■□□□□ 0.59
VWCE-208ENST00000613271 TRIM41Q8WV44 630 aa18.7■□□□□ 0.58
VWCE-208ENST00000613271 CCER1Q8TC90 406 aaPredicted RBP18.61■□□□□ 0.57
VWCE-208ENST00000613271 TTBK1Q5TCY1 1321 aaPredicted RBP18.6■□□□□ 0.57
VWCE-208ENST00000613271 DIEXFQ68CQ4 756 aaKnown RBP18.55■□□□□ 0.56
VWCE-208ENST00000613271 YTHDC1Q96MU7 727 aaKnown RBP18.51■□□□□ 0.55
VWCE-208ENST00000613271 CENPBP07199 599 aaPredicted RBP18.5■□□□□ 0.55
VWCE-208ENST00000613271 MYT1Q01538 1121 aa18.42■□□□□ 0.54
VWCE-208ENST00000613271 RSF1Q96T23 1441 aaPredicted RBP18.19■□□□□ 0.5
VWCE-208ENST00000613271 MIER1Q8N108 512 aa18.15■□□□□ 0.5
VWCE-208ENST00000613271 ZNF316A6NFI3 1004 aaPredicted RBP18.12■□□□□ 0.49
VWCE-208ENST00000613271 RB1CC1Q8TDY2 1594 aa18.1■□□□□ 0.49
VWCE-208ENST00000613271 NACADO15069 1562 aa18.07■□□□□ 0.48
VWCE-208ENST00000613271 ABCC9O60706 1549 aa18.06■□□□□ 0.48
VWCE-208ENST00000613271 SCRIBQ14160 1630 aa18.06■□□□□ 0.48
VWCE-208ENST00000613271 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.46
VWCE-208ENST00000613271 UBTFP17480 764 aaKnown RBP17.83■□□□□ 0.44
VWCE-208ENST00000613271 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
VWCE-208ENST00000613271 SUPT16HQ9Y5B9 1047 aaKnown RBP17.77■□□□□ 0.43
VWCE-208ENST00000613271 CEP162Q5TB80 1403 aa17.74■□□□□ 0.43
VWCE-208ENST00000613271 RANGAP1P46060 587 aaPredicted RBP17.73■□□□□ 0.43
VWCE-208ENST00000613271 TSHZ2Q9NRE2 1034 aa17.69■□□□□ 0.42
VWCE-208ENST00000613271 BCANQ96GW7 911 aa17.68■□□□□ 0.42
VWCE-208ENST00000613271 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
VWCE-208ENST00000613271 BCL11AQ9H165 835 aa17.66■□□□□ 0.42
VWCE-208ENST00000613271 ANP32EQ9BTT0 268 aa17.64■□□□□ 0.41
VWCE-208ENST00000613271 SOGA1O94964 1423 aa17.64■□□□□ 0.41
VWCE-208ENST00000613271 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
VWCE-208ENST00000613271 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
VWCE-208ENST00000613271 ABCC8Q09428 1581 aa17.61■□□□□ 0.41
VWCE-208ENST00000613271 CSRNP3Q8WYN3 585 aa17.6■□□□□ 0.41
VWCE-208ENST00000613271 WIZO95785 1651 aa17.59■□□□□ 0.41
VWCE-208ENST00000613271 KCNH8Q96L42 1107 aa17.56■□□□□ 0.4
VWCE-208ENST00000613271 RUSC2Q8N2Y8 1516 aa17.55■□□□□ 0.4
VWCE-208ENST00000613271 TNIKQ9UKE5 1360 aa17.52■□□□□ 0.4
VWCE-208ENST00000613271 BAZ1AQ9NRL2 1556 aaPredicted RBP17.48■□□□□ 0.39
VWCE-208ENST00000613271 APLP2Q06481 763 aa17.46■□□□□ 0.39
VWCE-208ENST00000613271 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
VWCE-208ENST00000613271 FKBP8Q14318 412 aa17.42■□□□□ 0.38
VWCE-208ENST00000613271 ITGAEP38570 1179 aa17.39■□□□□ 0.37
VWCE-208ENST00000613271 SMARCA4P51532 1647 aa17.34■□□□□ 0.37
VWCE-208ENST00000613271 CLSPNQ9HAW4 1339 aa17.32■□□□□ 0.36
VWCE-208ENST00000613271 PABPN1Q86U42 306 aaKnown RBP eCLIP17.3■□□□□ 0.368e-9■□□□□ 10.8
VWCE-208ENST00000613271 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
VWCE-208ENST00000613271 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
VWCE-208ENST00000613271 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
VWCE-208ENST00000613271 TOP2AP11388 1531 aaKnown RBP17.28■□□□□ 0.36
VWCE-208ENST00000613271 CLIP1P30622 1438 aa17.28■□□□□ 0.36
VWCE-208ENST00000613271 GOLGA3Q08378 1498 aa17.27■□□□□ 0.36
VWCE-208ENST00000613271 DHX57Q6P158 1386 aaKnown RBP17.26■□□□□ 0.35
VWCE-208ENST00000613271 DDX10Q13206 875 aaKnown RBP17.25■□□□□ 0.35
VWCE-208ENST00000613271 TRIM52Q96A61 297 aa17.24■□□□□ 0.35
VWCE-208ENST00000613271 HIRIP3Q9BW71 556 aaPredicted RBP17.24■□□□□ 0.35
VWCE-208ENST00000613271 KANK4Q5T7N3 995 aaPredicted RBP17.2■□□□□ 0.34
VWCE-208ENST00000613271 MSH5O43196 834 aa17.17■□□□□ 0.34
VWCE-208ENST00000613271 NEFLP07196 543 aa17.16■□□□□ 0.34
VWCE-208ENST00000613271 VPS8Q8N3P4 1428 aa17.15■□□□□ 0.34
VWCE-208ENST00000613271 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
VWCE-208ENST00000613271 EEA1Q15075 1411 aa17.14■□□□□ 0.34
VWCE-208ENST00000613271 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
VWCE-208ENST00000613271 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
VWCE-208ENST00000613271 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
VWCE-208ENST00000613271 RAPGEF2Q9Y4G8 1499 aa17.07■□□□□ 0.32
VWCE-208ENST00000613271 SIN3AQ96ST3 1273 aa17.07■□□□□ 0.32
VWCE-208ENST00000613271 ERICH6Q7L0X2 663 aa17.02■□□□□ 0.32
VWCE-208ENST00000613271 KIF21BO75037 1637 aa16.99■□□□□ 0.31
VWCE-208ENST00000613271 ATAD2BQ9ULI0 1458 aa16.94■□□□□ 0.3
VWCE-208ENST00000613271 ANP32CO43423 234 aa16.92■□□□□ 0.3
VWCE-208ENST00000613271 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
VWCE-208ENST00000613271 PPP1R15AO75807 674 aaPredicted RBP16.91■□□□□ 0.3
VWCE-208ENST00000613271 RAB3GAP2Q9H2M9 1393 aa16.9■□□□□ 0.3
VWCE-208ENST00000613271 CDK11AQ9UQ88 783 aaPredicted RBP16.89■□□□□ 0.29
VWCE-208ENST00000613271 HNRNPUQ00839 825 aaKnown RBP eCLIP16.87■□□□□ 0.29
VWCE-208ENST00000613271 CCNB3Q8WWL7 1395 aa16.86■□□□□ 0.29
VWCE-208ENST00000613271 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
VWCE-208ENST00000613271 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
VWCE-208ENST00000613271 NBR1Q14596 966 aa16.84■□□□□ 0.29
VWCE-208ENST00000613271 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms