RNA–Protein interactions for RNA: ENST00000344989.10

SRSF10-204, Transcript of serine and arginine rich splicing factor 10, humanhuman

TSL 1 (best) BASIC

Gene SRSF10, Length 3,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF10-204ENST00000344989 NISCHQ9Y2I1 1504 aa18.26■□□□□ 0.51
SRSF10-204ENST00000344989 SHROOM4Q9ULL8 1493 aa16.44■□□□□ 0.22
SRSF10-204ENST00000344989 DCAF8L2P0C7V8 631 aa16.33■□□□□ 0.21
SRSF10-204ENST00000344989 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
SRSF10-204ENST00000344989 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.05
SRSF10-204ENST00000344989 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
SRSF10-204ENST00000344989 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
SRSF10-204ENST00000344989 LOC105371045A0A1W2PR82 267 aa15.16■□□□□ 0.02
SRSF10-204ENST00000344989 PCGF6Q9BYE7 350 aa15.16■□□□□ 0.02
SRSF10-204ENST00000344989 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
SRSF10-204ENST00000344989 FAM9AQ8IZU1 332 aaPredicted RBP15.1■□□□□ 0.01
SRSF10-204ENST00000344989 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
SRSF10-204ENST00000344989 ABCC9O60706 1549 aa14.91□□□□□ -0.02
SRSF10-204ENST00000344989 PPARGC1BQ86YN6 1023 aaKnown RBP14.85□□□□□ -0.03
SRSF10-204ENST00000344989 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
SRSF10-204ENST00000344989 SCRIBQ14160 1630 aa14.81□□□□□ -0.04
SRSF10-204ENST00000344989 HRCP23327 699 aa14.76□□□□□ -0.05
SRSF10-204ENST00000344989 TTBK1Q5TCY1 1321 aaPredicted RBP14.71□□□□□ -0.05
SRSF10-204ENST00000344989 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
SRSF10-204ENST00000344989 DCAF1Q9Y4B6 1507 aa14.59□□□□□ -0.07
SRSF10-204ENST00000344989 PABPN1Q86U42 306 aaKnown RBP eCLIP14.54□□□□□ -0.08
SRSF10-204ENST00000344989 TRIM26Q12899 539 aaPredicted RBP14.53□□□□□ -0.08
SRSF10-204ENST00000344989 CECR2Q9BXF3 1484 aa14.52□□□□□ -0.09
SRSF10-204ENST00000344989 RB1CC1Q8TDY2 1594 aa14.43□□□□□ -0.1
SRSF10-204ENST00000344989 RANGAP1P46060 587 aaPredicted RBP14.42□□□□□ -0.1
SRSF10-204ENST00000344989 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
SRSF10-204ENST00000344989 UBTFP17480 764 aaKnown RBP14.3□□□□□ -0.12
SRSF10-204ENST00000344989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.28□□□□□ -0.12
SRSF10-204ENST00000344989 WIZO95785 1651 aa14.25□□□□□ -0.13
SRSF10-204ENST00000344989 CCER1Q8TC90 406 aaPredicted RBP14.23□□□□□ -0.13
SRSF10-204ENST00000344989 NACADO15069 1562 aa14.22□□□□□ -0.13
SRSF10-204ENST00000344989 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
SRSF10-204ENST00000344989 ZEB1P37275 1124 aaPredicted RBP14.09□□□□□ -0.15
SRSF10-204ENST00000344989 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
SRSF10-204ENST00000344989 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
SRSF10-204ENST00000344989 SOGA1O94964 1423 aa14.02□□□□□ -0.16
SRSF10-204ENST00000344989 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.17
SRSF10-204ENST00000344989 BAZ1AQ9NRL2 1556 aaPredicted RBP14□□□□□ -0.17
SRSF10-204ENST00000344989 APLP2Q06481 763 aa13.96□□□□□ -0.17
SRSF10-204ENST00000344989 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
SRSF10-204ENST00000344989 CEP162Q5TB80 1403 aa13.88□□□□□ -0.19
SRSF10-204ENST00000344989 SMARCA4P51532 1647 aa13.86□□□□□ -0.19
SRSF10-204ENST00000344989 YTHDC1Q96MU7 727 aaKnown RBP13.86□□□□□ -0.19
SRSF10-204ENST00000344989 ITGAEP38570 1179 aa13.84□□□□□ -0.19
SRSF10-204ENST00000344989 TOP2AP11388 1531 aaKnown RBP13.83□□□□□ -0.2
SRSF10-204ENST00000344989 ATP1B4Q9UN42 357 aaPredicted RBP13.81□□□□□ -0.2
SRSF10-204ENST00000344989 WRNQ14191 1432 aaPredicted RBP eCLIP13.8□□□□□ -0.2
SRSF10-204ENST00000344989 SMARCA2P51531 1590 aa13.8□□□□□ -0.2
SRSF10-204ENST00000344989 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
SRSF10-204ENST00000344989 UNC13AQ9UPW8 1703 aa13.73□□□□□ -0.21
SRSF10-204ENST00000344989 TNIKQ9UKE5 1360 aa13.72□□□□□ -0.21
SRSF10-204ENST00000344989 BAZ1BQ9UIG0 1483 aaKnown RBP13.72□□□□□ -0.21
SRSF10-204ENST00000344989 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
SRSF10-204ENST00000344989 P3H3Q8IVL6 736 aa13.68□□□□□ -0.22
SRSF10-204ENST00000344989 CLIP1P30622 1438 aa13.67□□□□□ -0.22
SRSF10-204ENST00000344989 GOLGA3Q08378 1498 aa13.66□□□□□ -0.22
SRSF10-204ENST00000344989 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
SRSF10-204ENST00000344989 ATAD2BQ9ULI0 1458 aa13.65□□□□□ -0.22
SRSF10-204ENST00000344989 NEUROD1Q13562 356 aa13.64□□□□□ -0.23
SRSF10-204ENST00000344989 EIF4G1Q04637 1599 aaKnown RBP13.61□□□□□ -0.23
SRSF10-204ENST00000344989 RAPGEF2Q9Y4G8 1499 aa13.6□□□□□ -0.23
SRSF10-204ENST00000344989 SYNJ1O43426 1573 aa13.58□□□□□ -0.24
SRSF10-204ENST00000344989 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.24
SRSF10-204ENST00000344989 GTF3C3Q9Y5Q9 886 aa13.58□□□□□ -0.24
SRSF10-204ENST00000344989 EEA1Q15075 1411 aa13.57□□□□□ -0.24
SRSF10-204ENST00000344989 KANK4Q5T7N3 995 aaPredicted RBP13.57□□□□□ -0.24
SRSF10-204ENST00000344989 CENPBP07199 599 aaPredicted RBP13.56□□□□□ -0.24
SRSF10-204ENST00000344989 CEP164Q9UPV0 1460 aa13.56□□□□□ -0.24
SRSF10-204ENST00000344989 ACIN1Q9UKV3 1341 aaKnown RBP13.53□□□□□ -0.24
SRSF10-204ENST00000344989 MIER1Q8N108 512 aa13.51□□□□□ -0.25
SRSF10-204ENST00000344989 FAM50AQ14320 339 aaKnown RBP13.5□□□□□ -0.25
SRSF10-204ENST00000344989 VPS8Q8N3P4 1428 aa13.45□□□□□ -0.26
SRSF10-204ENST00000344989 ARID3CA6NKF2 412 aa13.44□□□□□ -0.26
SRSF10-204ENST00000344989 HIRIP3Q9BW71 556 aaPredicted RBP13.38□□□□□ -0.27
SRSF10-204ENST00000344989 KIF27Q86VH2 1401 aa13.38□□□□□ -0.27
SRSF10-204ENST00000344989 CUX2O14529 1486 aa13.36□□□□□ -0.27
SRSF10-204ENST00000344989 KIF21BO75037 1637 aa13.35□□□□□ -0.27
SRSF10-204ENST00000344989 PEG3Q9GZU2 1588 aa13.31□□□□□ -0.28
SRSF10-204ENST00000344989 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
SRSF10-204ENST00000344989 SIN3AQ96ST3 1273 aa13.3□□□□□ -0.28
SRSF10-204ENST00000344989 CUX1P39880 1505 aa13.3□□□□□ -0.28
SRSF10-204ENST00000344989 ARAP1Q96P48 1450 aa13.3□□□□□ -0.28
SRSF10-204ENST00000344989 CARMIL1Q5VZK9 1371 aa13.28□□□□□ -0.28
SRSF10-204ENST00000344989 NCAPD3P42695 1498 aa13.27□□□□□ -0.29
SRSF10-204ENST00000344989 TOP2BQ02880 1626 aa13.27□□□□□ -0.29
SRSF10-204ENST00000344989 IGF1RP08069 1367 aa13.24□□□□□ -0.29
SRSF10-204ENST00000344989 CADPSQ9ULU8 1353 aa13.23□□□□□ -0.29
SRSF10-204ENST00000344989 CCNB3Q8WWL7 1395 aa13.23□□□□□ -0.29
SRSF10-204ENST00000344989 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
SRSF10-204ENST00000344989 DHX57Q6P158 1386 aaKnown RBP13.22□□□□□ -0.29
SRSF10-204ENST00000344989 CNGB1Q14028 1251 aaPredicted RBP13.22□□□□□ -0.29
SRSF10-204ENST00000344989 DDX10Q13206 875 aaKnown RBP13.22□□□□□ -0.29
SRSF10-204ENST00000344989 CHIC2Q9UKJ5 165 aa13.21□□□□□ -0.29
SRSF10-204ENST00000344989 RAD54L2Q9Y4B4 1467 aa13.21□□□□□ -0.3
SRSF10-204ENST00000344989 CFTRP13569 1480 aa13.2□□□□□ -0.3
SRSF10-204ENST00000344989 TDRD9Q8NDG6 1382 aaKnown RBP13.2□□□□□ -0.3
SRSF10-204ENST00000344989 KCNH8Q96L42 1107 aa13.19□□□□□ -0.3
SRSF10-204ENST00000344989 NESP48681 1621 aa13.19□□□□□ -0.3
SRSF10-204ENST00000344989 ARHGAP35Q9NRY4 1499 aa13.18□□□□□ -0.3
SRSF10-204ENST00000344989 FGD5Q6ZNL6 1462 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms