RNA–Protein interactions for RNA: ENST00000397261.7

ARPC4-201, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC4, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-201ENST00000397261 NISCHQ9Y2I1 1504 aa38.68■■■■□ 3.78
ARPC4-201ENST00000397261 SHROOM4Q9ULL8 1493 aa33.21■■■□□ 2.91
ARPC4-201ENST00000397261 CCDC180Q9P1Z9 1646 aa32.79■■■□□ 2.84
ARPC4-201ENST00000397261 DCAF8L2P0C7V8 631 aa32.7■■■□□ 2.83
ARPC4-201ENST00000397261 ZCCHC6Q5VYS8 1495 aaKnown RBP32.6■■■□□ 2.81
ARPC4-201ENST00000397261 SUPT5HO00267 1087 aaKnown RBP32.4■■■□□ 2.78
ARPC4-201ENST00000397261 DCAF1Q9Y4B6 1507 aa31.49■■■□□ 2.63
ARPC4-201ENST00000397261 CHIC1Q5VXU3 224 aa31.15■■■□□ 2.58
ARPC4-201ENST00000397261 ABCC9O60706 1549 aa31.15■■■□□ 2.58
ARPC4-201ENST00000397261 SCRIBQ14160 1630 aa31.06■■■□□ 2.56
ARPC4-201ENST00000397261 MYO15BQ96JP2 1530 aa30.98■■■□□ 2.55
ARPC4-201ENST00000397261 RSF1Q96T23 1441 aaPredicted RBP30.58■■■□□ 2.49
ARPC4-201ENST00000397261 NACADO15069 1562 aa30.49■■■□□ 2.47
ARPC4-201ENST00000397261 LOC105371045A0A1W2PR82 267 aa30.44■■■□□ 2.46
ARPC4-201ENST00000397261 CECR2Q9BXF3 1484 aa30.41■■■□□ 2.46
ARPC4-201ENST00000397261 RB1CC1Q8TDY2 1594 aa30.23■■■□□ 2.43
ARPC4-201ENST00000397261 MROH2BQ7Z745 1585 aa30.18■■■□□ 2.42
ARPC4-201ENST00000397261 FAM9AQ8IZU1 332 aaPredicted RBP30.03■■■□□ 2.4
ARPC4-201ENST00000397261 TRIM41Q8WV44 630 aa30.03■■■□□ 2.4
ARPC4-201ENST00000397261 WIZO95785 1651 aa30.01■■■□□ 2.39
ARPC4-201ENST00000397261 PCGF6Q9BYE7 350 aa30■■■□□ 2.39
ARPC4-201ENST00000397261 EHMT2Q96KQ7 1210 aa29.99■■■□□ 2.39
ARPC4-201ENST00000397261 PABPN1Q86U42 306 aaKnown RBP eCLIP29.89■■■□□ 2.38
ARPC4-201ENST00000397261 UNC13AQ9UPW8 1703 aa29.75■■■□□ 2.35
ARPC4-201ENST00000397261 BAZ1AQ9NRL2 1556 aaPredicted RBP29.66■■■□□ 2.34
ARPC4-201ENST00000397261 HRCP23327 699 aa29.54■■■□□ 2.32
ARPC4-201ENST00000397261 SMARCA4P51532 1647 aa29.51■■■□□ 2.31
ARPC4-201ENST00000397261 BICRAQ9NZM4 1560 aa29.42■■■□□ 2.3
ARPC4-201ENST00000397261 CCDC88BA6NC98 1476 aa29.39■■■□□ 2.29
ARPC4-201ENST00000397261 TOP2AP11388 1531 aaKnown RBP29.35■■■□□ 2.29
ARPC4-201ENST00000397261 PPARGC1BQ86YN6 1023 aaKnown RBP29.33■■■□□ 2.29
ARPC4-201ENST00000397261 ABCC8Q09428 1581 aa29.3■■■□□ 2.28
ARPC4-201ENST00000397261 TRIM26Q12899 539 aaPredicted RBP29.26■■■□□ 2.27
ARPC4-201ENST00000397261 SMARCA2P51531 1590 aa29.25■■■□□ 2.27
ARPC4-201ENST00000397261 EIF4G1Q04637 1599 aaKnown RBP29.25■■■□□ 2.27
ARPC4-201ENST00000397261 SOGA1O94964 1423 aa28.98■■■□□ 2.23
ARPC4-201ENST00000397261 RUSC2Q8N2Y8 1516 aa28.9■■■□□ 2.22
ARPC4-201ENST00000397261 ATAD2BQ9ULI0 1458 aa28.89■■■□□ 2.22
ARPC4-201ENST00000397261 TTBK1Q5TCY1 1321 aaPredicted RBP28.87■■■□□ 2.21
ARPC4-201ENST00000397261 PEG3Q9GZU2 1588 aa28.8■■■□□ 2.2
ARPC4-201ENST00000397261 BAZ1BQ9UIG0 1483 aaKnown RBP28.8■■■□□ 2.2
ARPC4-201ENST00000397261 CSRNP3Q8WYN3 585 aa28.72■■■□□ 2.19
ARPC4-201ENST00000397261 UBTFP17480 764 aaKnown RBP28.72■■■□□ 2.19
ARPC4-201ENST00000397261 WRNQ14191 1432 aaPredicted RBP eCLIP28.72■■■□□ 2.19
ARPC4-201ENST00000397261 SYNJ1O43426 1573 aa28.6■■■□□ 2.17
ARPC4-201ENST00000397261 CEP162Q5TB80 1403 aa28.58■■■□□ 2.16
ARPC4-201ENST00000397261 RANGAP1P46060 587 aaPredicted RBP28.52■■■□□ 2.16
ARPC4-201ENST00000397261 TNIKQ9UKE5 1360 aa28.46■■■□□ 2.15
ARPC4-201ENST00000397261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.43■■■□□ 2.14
ARPC4-201ENST00000397261 EEA1Q15075 1411 aa28.4■■■□□ 2.14
ARPC4-201ENST00000397261 GOLGA3Q08378 1498 aa28.35■■■□□ 2.13
ARPC4-201ENST00000397261 NCAPD3P42695 1498 aa28.3■■■□□ 2.12
ARPC4-201ENST00000397261 ZEB1P37275 1124 aaPredicted RBP28.27■■■□□ 2.12
ARPC4-201ENST00000397261 RAPGEF2Q9Y4G8 1499 aa28.23■■■□□ 2.11
ARPC4-201ENST00000397261 CEP164Q9UPV0 1460 aa28.2■■■□□ 2.11
ARPC4-201ENST00000397261 CCER1Q8TC90 406 aaPredicted RBP28.2■■■□□ 2.1
ARPC4-201ENST00000397261 HMGXB3Q12766 1538 aa28.18■■■□□ 2.1
ARPC4-201ENST00000397261 TOP2BQ02880 1626 aa28.15■■■□□ 2.1
ARPC4-201ENST00000397261 CLIP1P30622 1438 aa28.11■■■□□ 2.09
ARPC4-201ENST00000397261 KIF21BO75037 1637 aa28.08■■■□□ 2.09
ARPC4-201ENST00000397261 CUX1P39880 1505 aa28.08■■■□□ 2.09
ARPC4-201ENST00000397261 CFTRP13569 1480 aa28.02■■■□□ 2.08
ARPC4-201ENST00000397261 BIVM-ERCC5R4GMW8 1640 aa28■■■□□ 2.07
ARPC4-201ENST00000397261 HNRNPUL2Q1KMD3 747 aaKnown RBP27.97■■■□□ 2.07
ARPC4-201ENST00000397261 CC2D2AQ9P2K1 1620 aa27.88■■■□□ 2.05
ARPC4-201ENST00000397261 APLP2Q06481 763 aa27.87■■■□□ 2.05
ARPC4-201ENST00000397261 VPS8Q8N3P4 1428 aa27.87■■■□□ 2.05
ARPC4-201ENST00000397261 PRXQ9BXM0 1461 aa27.84■■■□□ 2.05
ARPC4-201ENST00000397261 CADPSQ9ULU8 1353 aa27.84■■■□□ 2.05
ARPC4-201ENST00000397261 KIF27Q86VH2 1401 aa27.81■■■□□ 2.04
ARPC4-201ENST00000397261 CUX2O14529 1486 aa27.73■■■□□ 2.03
ARPC4-201ENST00000397261 DNAJC5BQ9UF47 199 aa27.72■■■□□ 2.03
ARPC4-201ENST00000397261 KANK4Q5T7N3 995 aaPredicted RBP27.71■■■□□ 2.03
ARPC4-201ENST00000397261 ARAP1Q96P48 1450 aa27.68■■■□□ 2.02
ARPC4-201ENST00000397261 NESP48681 1621 aa27.68■■■□□ 2.02
ARPC4-201ENST00000397261 ERICH3Q5RHP9 1530 aa27.67■■■□□ 2.02
ARPC4-201ENST00000397261 FGD5Q6ZNL6 1462 aa27.65■■■□□ 2.02
ARPC4-201ENST00000397261 IGF1RP08069 1367 aa27.64■■■□□ 2.02
ARPC4-201ENST00000397261 FANCD2Q9BXW9 1451 aa27.59■■■□□ 2.01
ARPC4-201ENST00000397261 PRDM2Q13029 1718 aa27.57■■■□□ 2
ARPC4-201ENST00000397261 P3H3Q8IVL6 736 aa27.55■■■□□ 2
ARPC4-201ENST00000397261 RAD54L2Q9Y4B4 1467 aa27.54■■■□□ 2
ARPC4-201ENST00000397261 CARMIL1Q5VZK9 1371 aa27.52■■■□□ 2
ARPC4-201ENST00000397261 ARHGAP35Q9NRY4 1499 aa27.51■■□□□ 1.99
ARPC4-201ENST00000397261 ITGAEP38570 1179 aa27.44■■□□□ 1.98
ARPC4-201ENST00000397261 DIEXFQ68CQ4 756 aaKnown RBP27.41■■□□□ 1.98
ARPC4-201ENST00000397261 ATP1B4Q9UN42 357 aaPredicted RBP27.41■■□□□ 1.98
ARPC4-201ENST00000397261 POLA1P09884 1462 aaPredicted RBP27.35■■□□□ 1.97
ARPC4-201ENST00000397261 TOPBP1Q92547 1522 aa27.35■■□□□ 1.97
ARPC4-201ENST00000397261 DNMBPQ6XZF7 1577 aa27.27■■□□□ 1.96
ARPC4-201ENST00000397261 TDRD9Q8NDG6 1382 aaKnown RBP27.26■■□□□ 1.95
ARPC4-201ENST00000397261 ZNF316A6NFI3 1004 aaPredicted RBP27.24■■□□□ 1.95
ARPC4-201ENST00000397261 URB2Q14146 1524 aaKnown RBP27.23■■□□□ 1.95
ARPC4-201ENST00000397261 ABCA10Q8WWZ4 1543 aa27.19■■□□□ 1.94
ARPC4-201ENST00000397261 FHOD3Q2V2M9 1422 aa27.18■■□□□ 1.94
ARPC4-201ENST00000397261 CCNB3Q8WWL7 1395 aa27.14■■□□□ 1.94
ARPC4-201ENST00000397261 RRBP1Q9P2E9 1410 aaKnown RBP27.13■■□□□ 1.93
ARPC4-201ENST00000397261 DHX57Q6P158 1386 aaKnown RBP27.13■■□□□ 1.93
ARPC4-201ENST00000397261 SCAF1Q9H7N4 1312 aaKnown RBP27.12■■□□□ 1.93
ARPC4-201ENST00000397261 LAMC3Q9Y6N6 1575 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms