RNA–Protein interactions for RNA: ENST00000335613.9

VWCE-202, Transcript of von Willebrand factor C and EGF domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VWCE, Length 3,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWCE-202ENST00000335613 NISCHQ9Y2I1 1504 aa26.99■■□□□ 1.91
VWCE-202ENST00000335613 SHROOM4Q9ULL8 1493 aa25.3■■□□□ 1.64
VWCE-202ENST00000335613 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
VWCE-202ENST00000335613 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
VWCE-202ENST00000335613 PCGF6Q9BYE7 350 aa24.36■■□□□ 1.49
VWCE-202ENST00000335613 PPARGC1BQ86YN6 1023 aaKnown RBP24.07■■□□□ 1.44
VWCE-202ENST00000335613 EHMT2Q96KQ7 1210 aa24.04■■□□□ 1.44
VWCE-202ENST00000335613 HRCP23327 699 aa23.91■■□□□ 1.42
VWCE-202ENST00000335613 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
VWCE-202ENST00000335613 LOC105371045A0A1W2PR82 267 aa23.77■■□□□ 1.4
VWCE-202ENST00000335613 FAM9AQ8IZU1 332 aaPredicted RBP23.61■■□□□ 1.37
VWCE-202ENST00000335613 MYO15BQ96JP2 1530 aa23.4■■□□□ 1.34
VWCE-202ENST00000335613 TTBK1Q5TCY1 1321 aaPredicted RBP23.26■■□□□ 1.31
VWCE-202ENST00000335613 TRIM26Q12899 539 aaPredicted RBP23.09■■□□□ 1.29
VWCE-202ENST00000335613 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
VWCE-202ENST00000335613 CCER1Q8TC90 406 aaPredicted RBP22.74■■□□□ 1.23
VWCE-202ENST00000335613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.71■■□□□ 1.23
VWCE-202ENST00000335613 ZCCHC6Q5VYS8 1495 aaKnown RBP22.7■■□□□ 1.22
VWCE-202ENST00000335613 ZEB1P37275 1124 aaPredicted RBP22.67■■□□□ 1.22
VWCE-202ENST00000335613 YTHDC1Q96MU7 727 aaKnown RBP22.57■■□□□ 1.2
VWCE-202ENST00000335613 SCAF1Q9H7N4 1312 aaKnown RBP22.54■■□□□ 1.2
VWCE-202ENST00000335613 DCAF1Q9Y4B6 1507 aa22.45■■□□□ 1.18
VWCE-202ENST00000335613 RANGAP1P46060 587 aaPredicted RBP22.45■■□□□ 1.18
VWCE-202ENST00000335613 PELP1Q8IZL8 1130 aaKnown RBP22.36■■□□□ 1.17
VWCE-202ENST00000335613 GTF3C3Q9Y5Q9 886 aa22.28■■□□□ 1.16
VWCE-202ENST00000335613 CENPBP07199 599 aaPredicted RBP22.25■■□□□ 1.15
VWCE-202ENST00000335613 DIEXFQ68CQ4 756 aaKnown RBP22.24■■□□□ 1.15
VWCE-202ENST00000335613 NEUROD1Q13562 356 aa22.24■■□□□ 1.15
VWCE-202ENST00000335613 UBTFP17480 764 aaKnown RBP22.21■■□□□ 1.15
VWCE-202ENST00000335613 ACIN1Q9UKV3 1341 aaKnown RBP22.12■■□□□ 1.13
VWCE-202ENST00000335613 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
VWCE-202ENST00000335613 CCDC180Q9P1Z9 1646 aa21.9■■□□□ 1.1
VWCE-202ENST00000335613 RSF1Q96T23 1441 aaPredicted RBP21.9■■□□□ 1.1
VWCE-202ENST00000335613 SCRIBQ14160 1630 aa21.89■■□□□ 1.09
VWCE-202ENST00000335613 APLP2Q06481 763 aa21.88■■□□□ 1.09
VWCE-202ENST00000335613 ABCC9O60706 1549 aa21.75■■□□□ 1.07
VWCE-202ENST00000335613 ZNF316A6NFI3 1004 aaPredicted RBP21.7■■□□□ 1.07
VWCE-202ENST00000335613 ITGAEP38570 1179 aa21.69■■□□□ 1.06
VWCE-202ENST00000335613 MIER1Q8N108 512 aa21.66■■□□□ 1.06
VWCE-202ENST00000335613 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.06
VWCE-202ENST00000335613 CECR2Q9BXF3 1484 aa21.58■■□□□ 1.05
VWCE-202ENST00000335613 PABPN1Q86U42 306 aaKnown RBP eCLIP21.54■■□□□ 1.048e-9■□□□□ 10.8
VWCE-202ENST00000335613 CSRNP3Q8WYN3 585 aa21.49■■□□□ 1.03
VWCE-202ENST00000335613 BCANQ96GW7 911 aa21.48■■□□□ 1.03
VWCE-202ENST00000335613 ATP1B4Q9UN42 357 aaPredicted RBP21.42■■□□□ 1.02
VWCE-202ENST00000335613 CEP162Q5TB80 1403 aa21.33■■□□□ 1.01
VWCE-202ENST00000335613 SOGA1O94964 1423 aa21.31■■□□□ 1
VWCE-202ENST00000335613 MROH2BQ7Z745 1585 aa21.29■■□□□ 1
VWCE-202ENST00000335613 MYT1Q01538 1121 aa21.27■■□□□ 1
VWCE-202ENST00000335613 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
VWCE-202ENST00000335613 CCDC88BA6NC98 1476 aa21.22■□□□□ 0.99
VWCE-202ENST00000335613 HIRIP3Q9BW71 556 aaPredicted RBP21.14■□□□□ 0.97
VWCE-202ENST00000335613 WIZO95785 1651 aa21.11■□□□□ 0.97
VWCE-202ENST00000335613 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
VWCE-202ENST00000335613 CNGB1Q14028 1251 aaPredicted RBP21.06■□□□□ 0.96
VWCE-202ENST00000335613 TNIKQ9UKE5 1360 aa21.01■□□□□ 0.95
VWCE-202ENST00000335613 NEFLP07196 543 aa20.99■□□□□ 0.95
VWCE-202ENST00000335613 DDX10Q13206 875 aaKnown RBP20.99■□□□□ 0.95
VWCE-202ENST00000335613 FAM50AQ14320 339 aaKnown RBP20.99■□□□□ 0.95
VWCE-202ENST00000335613 KCNH8Q96L42 1107 aa20.99■□□□□ 0.95
VWCE-202ENST00000335613 SUPT16HQ9Y5B9 1047 aaKnown RBP20.98■□□□□ 0.95
VWCE-202ENST00000335613 FKBP8Q14318 412 aa20.97■□□□□ 0.95
VWCE-202ENST00000335613 CLIP1P30622 1438 aa20.97■□□□□ 0.95
VWCE-202ENST00000335613 P3H3Q8IVL6 736 aa20.96■□□□□ 0.95
VWCE-202ENST00000335613 TRIM52Q96A61 297 aa20.95■□□□□ 0.94
VWCE-202ENST00000335613 KANK4Q5T7N3 995 aaPredicted RBP20.86■□□□□ 0.93
VWCE-202ENST00000335613 GOLGA3Q08378 1498 aa20.83■□□□□ 0.93
VWCE-202ENST00000335613 ERICH6Q7L0X2 663 aa20.81■□□□□ 0.92
VWCE-202ENST00000335613 IRX6P78412 446 aaPredicted RBP20.81■□□□□ 0.92
VWCE-202ENST00000335613 WRNQ14191 1432 aaPredicted RBP eCLIP20.79■□□□□ 0.92
VWCE-202ENST00000335613 SIN3AQ96ST3 1273 aa20.78■□□□□ 0.92
VWCE-202ENST00000335613 TSHZ2Q9NRE2 1034 aa20.73■□□□□ 0.91
VWCE-202ENST00000335613 POLR3GLQ9BT43 218 aa20.69■□□□□ 0.9
VWCE-202ENST00000335613 BAZ1AQ9NRL2 1556 aaPredicted RBP20.67■□□□□ 0.9
VWCE-202ENST00000335613 SENP3-EIF4A1A0A087X0R7 540 aa20.66■□□□□ 0.9
VWCE-202ENST00000335613 ANP32CO43423 234 aa20.65■□□□□ 0.9
VWCE-202ENST00000335613 NACADO15069 1562 aa20.61■□□□□ 0.89
VWCE-202ENST00000335613 EEA1Q15075 1411 aa20.61■□□□□ 0.89
VWCE-202ENST00000335613 ANP32EQ9BTT0 268 aa20.6■□□□□ 0.89
VWCE-202ENST00000335613 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
VWCE-202ENST00000335613 RAPGEF2Q9Y4G8 1499 aa20.6■□□□□ 0.89
VWCE-202ENST00000335613 VPS8Q8N3P4 1428 aa20.59■□□□□ 0.89
VWCE-202ENST00000335613 ARID3CA6NKF2 412 aa20.59■□□□□ 0.89
VWCE-202ENST00000335613 DHX57Q6P158 1386 aaKnown RBP20.56■□□□□ 0.88
VWCE-202ENST00000335613 HNRNPUQ00839 825 aaKnown RBP eCLIP20.55■□□□□ 0.88
VWCE-202ENST00000335613 TOP2AP11388 1531 aaKnown RBP20.47■□□□□ 0.87
VWCE-202ENST00000335613 RBM19Q9Y4C8 960 aaKnown RBP20.44■□□□□ 0.86
VWCE-202ENST00000335613 SMARCA2P51531 1590 aa20.43■□□□□ 0.86
VWCE-202ENST00000335613 FAM9BQ8IZU0 186 aa20.42■□□□□ 0.86
VWCE-202ENST00000335613 CHIC2Q9UKJ5 165 aa20.42■□□□□ 0.86
VWCE-202ENST00000335613 BCL11AQ9H165 835 aa20.4■□□□□ 0.86
VWCE-202ENST00000335613 CCNB3Q8WWL7 1395 aa20.4■□□□□ 0.86
VWCE-202ENST00000335613 CDK11AQ9UQ88 783 aaPredicted RBP20.39■□□□□ 0.86
VWCE-202ENST00000335613 CLSPNQ9HAW4 1339 aa20.39■□□□□ 0.85
VWCE-202ENST00000335613 RAB3GAP2Q9H2M9 1393 aa20.37■□□□□ 0.85
VWCE-202ENST00000335613 ZNF326Q5BKZ1 582 aaKnown RBP20.35■□□□□ 0.85
VWCE-202ENST00000335613 TONSLQ96HA7 1378 aa20.33■□□□□ 0.84
VWCE-202ENST00000335613 SMARCA4P51532 1647 aa20.32■□□□□ 0.84
VWCE-202ENST00000335613 NBR1Q14596 966 aa20.29■□□□□ 0.84
VWCE-202ENST00000335613 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms