RNA–Protein interactions for RNA: ENST00000433034.1

ARPC4-203, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 3 BASIC

Gene ARPC4, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-203ENST00000433034 NISCHQ9Y2I1 1504 aa40.94■■■■■ 4.14
ARPC4-203ENST00000433034 CCDC180Q9P1Z9 1646 aa36.22■■■■□ 3.39
ARPC4-203ENST00000433034 ABCC9O60706 1549 aa35.54■■■■□ 3.28
ARPC4-203ENST00000433034 DCAF8L2P0C7V8 631 aa34.41■■■■□ 3.1
ARPC4-203ENST00000433034 ZCCHC6Q5VYS8 1495 aaKnown RBP34.13■■■■□ 3.05
ARPC4-203ENST00000433034 RB1CC1Q8TDY2 1594 aa34.12■■■■□ 3.05
ARPC4-203ENST00000433034 NACADO15069 1562 aa34.09■■■■□ 3.05
ARPC4-203ENST00000433034 MYO15BQ96JP2 1530 aa33.87■■■■□ 3.01
ARPC4-203ENST00000433034 DCAF1Q9Y4B6 1507 aa33.79■■■■□ 3
ARPC4-203ENST00000433034 PABPN1Q86U42 306 aaKnown RBP eCLIP33.32■■■□□ 2.92
ARPC4-203ENST00000433034 UNC13AQ9UPW8 1703 aa33.22■■■□□ 2.91
ARPC4-203ENST00000433034 SCRIBQ14160 1630 aa33.22■■■□□ 2.91
ARPC4-203ENST00000433034 BICRAQ9NZM4 1560 aa33.06■■■□□ 2.88
ARPC4-203ENST00000433034 SHROOM4Q9ULL8 1493 aa32.67■■■□□ 2.82
ARPC4-203ENST00000433034 DNAJC5BQ9UF47 199 aa32.51■■■□□ 2.79
ARPC4-203ENST00000433034 EIF4G1Q04637 1599 aaKnown RBP32.22■■■□□ 2.75
ARPC4-203ENST00000433034 CC2D2AQ9P2K1 1620 aa32.05■■■□□ 2.72
ARPC4-203ENST00000433034 CECR2Q9BXF3 1484 aa31.95■■■□□ 2.7
ARPC4-203ENST00000433034 SMARCA4P51532 1647 aa31.72■■■□□ 2.67
ARPC4-203ENST00000433034 BAZ1AQ9NRL2 1556 aaPredicted RBP31.72■■■□□ 2.67
ARPC4-203ENST00000433034 MROH2BQ7Z745 1585 aa31.6■■■□□ 2.65
ARPC4-203ENST00000433034 ATAD2BQ9ULI0 1458 aa31.56■■■□□ 2.64
ARPC4-203ENST00000433034 NCAPD3P42695 1498 aa31.49■■■□□ 2.63
ARPC4-203ENST00000433034 SMARCA2P51531 1590 aa31.48■■■□□ 2.63
ARPC4-203ENST00000433034 PEG3Q9GZU2 1588 aa31.34■■■□□ 2.61
ARPC4-203ENST00000433034 BAZ1BQ9UIG0 1483 aaKnown RBP31.33■■■□□ 2.61
ARPC4-203ENST00000433034 HMGXB3Q12766 1538 aa31.3■■■□□ 2.6
ARPC4-203ENST00000433034 RSF1Q96T23 1441 aaPredicted RBP31.3■■■□□ 2.6
ARPC4-203ENST00000433034 WIZO95785 1651 aa31.23■■■□□ 2.59
ARPC4-203ENST00000433034 TOP2AP11388 1531 aaKnown RBP30.9■■■□□ 2.54
ARPC4-203ENST00000433034 SUPT5HO00267 1087 aaKnown RBP30.78■■■□□ 2.52
ARPC4-203ENST00000433034 NESP48681 1621 aa30.77■■■□□ 2.52
ARPC4-203ENST00000433034 CADPSQ9ULU8 1353 aa30.64■■■□□ 2.5
ARPC4-203ENST00000433034 ERCC6Q03468 1493 aa30.63■■■□□ 2.49
ARPC4-203ENST00000433034 LAMC3Q9Y6N6 1575 aa30.6■■■□□ 2.49
ARPC4-203ENST00000433034 CCDC88BA6NC98 1476 aa30.59■■■□□ 2.49
ARPC4-203ENST00000433034 PDS5BQ9NTI5 1447 aa30.47■■■□□ 2.47
ARPC4-203ENST00000433034 CFTRP13569 1480 aa30.44■■■□□ 2.46
ARPC4-203ENST00000433034 KIF21AQ7Z4S6 1674 aa30.3■■■□□ 2.44
ARPC4-203ENST00000433034 FANCD2Q9BXW9 1451 aa30.29■■■□□ 2.44
ARPC4-203ENST00000433034 CEP164Q9UPV0 1460 aa30.23■■■□□ 2.43
ARPC4-203ENST00000433034 THOC2Q8NI27 1593 aaKnown RBP30.17■■■□□ 2.42
ARPC4-203ENST00000433034 CUX2O14529 1486 aa30.15■■■□□ 2.42
ARPC4-203ENST00000433034 MRC2Q9UBG0 1479 aa30.15■■■□□ 2.42
ARPC4-203ENST00000433034 PRDM2Q13029 1718 aa30.04■■■□□ 2.4
ARPC4-203ENST00000433034 WDR62O43379 1518 aa29.99■■■□□ 2.39
ARPC4-203ENST00000433034 URB2Q14146 1524 aaKnown RBP29.96■■■□□ 2.39
ARPC4-203ENST00000433034 TOPBP1Q92547 1522 aa29.8■■■□□ 2.36
ARPC4-203ENST00000433034 ABCC8Q09428 1581 aa29.76■■■□□ 2.35
ARPC4-203ENST00000433034 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
ARPC4-203ENST00000433034 CUX1P39880 1505 aa29.62■■■□□ 2.33
ARPC4-203ENST00000433034 IFT140Q96RY7 1462 aa29.58■■■□□ 2.33
ARPC4-203ENST00000433034 POLA1P09884 1462 aaPredicted RBP29.56■■■□□ 2.32
ARPC4-203ENST00000433034 FGD5Q6ZNL6 1462 aa29.53■■■□□ 2.32
ARPC4-203ENST00000433034 WRNQ14191 1432 aaPredicted RBP eCLIP29.52■■■□□ 2.32
ARPC4-203ENST00000433034 RAD54L2Q9Y4B4 1467 aa29.49■■■□□ 2.31
ARPC4-203ENST00000433034 SOGA1O94964 1423 aa29.48■■■□□ 2.31
ARPC4-203ENST00000433034 ZNF608Q9ULD9 1512 aaPredicted RBP29.47■■■□□ 2.31
ARPC4-203ENST00000433034 SYNJ1O43426 1573 aa29.39■■■□□ 2.3
ARPC4-203ENST00000433034 TARBP1Q13395 1621 aaKnown RBP29.39■■■□□ 2.3
ARPC4-203ENST00000433034 TOP2BQ02880 1626 aa29.35■■■□□ 2.29
ARPC4-203ENST00000433034 AQRO60306 1485 aaKnown RBP eCLIP29.35■■■□□ 2.293e-6■■■■□ 22.1
ARPC4-203ENST00000433034 TDRD9Q8NDG6 1382 aaKnown RBP29.34■■■□□ 2.29
ARPC4-203ENST00000433034 BIVM-ERCC5R4GMW8 1640 aa29.31■■■□□ 2.28
ARPC4-203ENST00000433034 EIF4G3O43432 1585 aaKnown RBP29.29■■■□□ 2.28
ARPC4-203ENST00000433034 ABCA10Q8WWZ4 1543 aa29.2■■■□□ 2.26
ARPC4-203ENST00000433034 DNAJC5Q9H3Z4 198 aa29.14■■■□□ 2.26
ARPC4-203ENST00000433034 WDR97A6NE52 1622 aa29.13■■■□□ 2.25
ARPC4-203ENST00000433034 GAPVD1Q14C86 1478 aa29.12■■■□□ 2.25
ARPC4-203ENST00000433034 GRIN2BQ13224 1484 aa29.09■■■□□ 2.25
ARPC4-203ENST00000433034 FBLN2P98095 1184 aa29.08■■■□□ 2.25
ARPC4-203ENST00000433034 SNAPC4Q5SXM2 1469 aa29.06■■■□□ 2.24
ARPC4-203ENST00000433034 ABCA5Q8WWZ7 1642 aa29.03■■■□□ 2.24
ARPC4-203ENST00000433034 OSCARQ8IYS5 282 aa29.03■■■□□ 2.24
ARPC4-203ENST00000433034 TRIM41Q8WV44 630 aa29.01■■■□□ 2.23
ARPC4-203ENST00000433034 CHMP7Q8WUX9 453 aaPredicted RBP28.96■■■□□ 2.23
ARPC4-203ENST00000433034 MAGI1Q96QZ7 1491 aaPredicted RBP28.96■■■□□ 2.23
ARPC4-203ENST00000433034 PBRM1Q86U86 1689 aa28.94■■■□□ 2.22
ARPC4-203ENST00000433034 KIF27Q86VH2 1401 aa28.89■■■□□ 2.22
ARPC4-203ENST00000433034 SYNJ2O15056 1496 aa28.86■■■□□ 2.21
ARPC4-203ENST00000433034 CHD1O14646 1710 aa28.85■■■□□ 2.21
ARPC4-203ENST00000433034 ERICH3Q5RHP9 1530 aa28.83■■■□□ 2.21
ARPC4-203ENST00000433034 FHAD1B1AJZ9 1412 aa28.78■■■□□ 2.2
ARPC4-203ENST00000433034 ADAMTS12P58397 1594 aa28.78■■■□□ 2.2
ARPC4-203ENST00000433034 IGF1RP08069 1367 aa28.76■■■□□ 2.2
ARPC4-203ENST00000433034 CHIC1Q5VXU3 224 aa28.73■■■□□ 2.19
ARPC4-203ENST00000433034 RUSC2Q8N2Y8 1516 aa28.71■■■□□ 2.19
ARPC4-203ENST00000433034 GRIN2AQ12879 1464 aa28.71■■■□□ 2.19
ARPC4-203ENST00000433034 CARMIL1Q5VZK9 1371 aa28.62■■■□□ 2.17
ARPC4-203ENST00000433034 CLASP1Q7Z460 1538 aa28.57■■■□□ 2.16
ARPC4-203ENST00000433034 CUL7Q14999 1698 aa28.57■■■□□ 2.16
ARPC4-203ENST00000433034 NUP160Q12769 1436 aa28.55■■■□□ 2.16
ARPC4-203ENST00000433034 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
ARPC4-203ENST00000433034 FAM9AQ8IZU1 332 aaPredicted RBP28.5■■■□□ 2.15
ARPC4-203ENST00000433034 ARHGEF11O15085 1522 aa28.49■■■□□ 2.15
ARPC4-203ENST00000433034 RIMBP3CA6NJZ7 1639 aa28.45■■■□□ 2.14
ARPC4-203ENST00000433034 RIMBP3BA6NNM3 1639 aa28.45■■■□□ 2.14
ARPC4-203ENST00000433034 RIMBP3Q9UFD9 1639 aa28.45■■■□□ 2.14
ARPC4-203ENST00000433034 RAPGEF2Q9Y4G8 1499 aa28.43■■■□□ 2.14
ARPC4-203ENST00000433034 CSRNP3Q8WYN3 585 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms