RNA–Protein interactions for RNA: ENST00000555615.1

CLMN-204, Transcript of calmin, humanhuman

TSL 5

Gene CLMN, Length 685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-204ENST00000555615 NISCHQ9Y2I1 1504 aa21.01■□□□□ 0.95
CLMN-204ENST00000555615 ABCC9O60706 1549 aa19.27■□□□□ 0.68
CLMN-204ENST00000555615 CCDC180Q9P1Z9 1646 aa19.05■□□□□ 0.64
CLMN-204ENST00000555615 RB1CC1Q8TDY2 1594 aa18.29■□□□□ 0.52
CLMN-204ENST00000555615 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
CLMN-204ENST00000555615 NACADO15069 1562 aa18.08■□□□□ 0.49
CLMN-204ENST00000555615 PABPN1Q86U42 306 aaKnown RBP eCLIP17.84■□□□□ 0.45
CLMN-204ENST00000555615 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.44
CLMN-204ENST00000555615 MYO15BQ96JP2 1530 aa17.76■□□□□ 0.43
CLMN-204ENST00000555615 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
CLMN-204ENST00000555615 BICRAQ9NZM4 1560 aa17.65■□□□□ 0.42
CLMN-204ENST00000555615 SHROOM4Q9ULL8 1493 aa17.58■□□□□ 0.41
CLMN-204ENST00000555615 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
CLMN-204ENST00000555615 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
CLMN-204ENST00000555615 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
CLMN-204ENST00000555615 DCAF1Q9Y4B6 1507 aa17.4■□□□□ 0.38
CLMN-204ENST00000555615 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
CLMN-204ENST00000555615 SCRIBQ14160 1630 aa17.28■□□□□ 0.36
CLMN-204ENST00000555615 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
CLMN-204ENST00000555615 CUX2O14529 1486 aa16.84■□□□□ 0.29
CLMN-204ENST00000555615 AEBP2Q6ZN18 517 aaPredicted RBP16.79■□□□□ 0.28
CLMN-204ENST00000555615 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
CLMN-204ENST00000555615 NCAPD3P42695 1498 aa16.66■□□□□ 0.26
CLMN-204ENST00000555615 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
CLMN-204ENST00000555615 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
CLMN-204ENST00000555615 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
CLMN-204ENST00000555615 SMARCA4P51532 1647 aa16.47■□□□□ 0.23
CLMN-204ENST00000555615 BAZ1BQ9UIG0 1483 aaKnown RBP16.42■□□□□ 0.22
CLMN-204ENST00000555615 NESP48681 1621 aa16.42■□□□□ 0.22
CLMN-204ENST00000555615 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
CLMN-204ENST00000555615 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
CLMN-204ENST00000555615 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
CLMN-204ENST00000555615 PEG3Q9GZU2 1588 aa16.33■□□□□ 0.2
CLMN-204ENST00000555615 PDS5BQ9NTI5 1447 aa16.31■□□□□ 0.2
CLMN-204ENST00000555615 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
CLMN-204ENST00000555615 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
CLMN-204ENST00000555615 TRIM41Q8WV44 630 aa16.21■□□□□ 0.19
CLMN-204ENST00000555615 RSF1Q96T23 1441 aaPredicted RBP16.17■□□□□ 0.18
CLMN-204ENST00000555615 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
CLMN-204ENST00000555615 CADPSQ9ULU8 1353 aa16.14■□□□□ 0.17
CLMN-204ENST00000555615 MROH2BQ7Z745 1585 aa16.13■□□□□ 0.17
CLMN-204ENST00000555615 WDR62O43379 1518 aa16.12■□□□□ 0.17
CLMN-204ENST00000555615 CEP164Q9UPV0 1460 aa16.05■□□□□ 0.16
CLMN-204ENST00000555615 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
CLMN-204ENST00000555615 OSCARQ8IYS5 282 aa15.96■□□□□ 0.15
CLMN-204ENST00000555615 CHIC1Q5VXU3 224 aa15.93■□□□□ 0.14
CLMN-204ENST00000555615 WIZO95785 1651 aa15.92■□□□□ 0.14
CLMN-204ENST00000555615 CFTRP13569 1480 aa15.9■□□□□ 0.14
CLMN-204ENST00000555615 TOP2AP11388 1531 aaKnown RBP15.82■□□□□ 0.12
CLMN-204ENST00000555615 URB2Q14146 1524 aaKnown RBP15.81■□□□□ 0.12
CLMN-204ENST00000555615 RIMBP3CA6NJZ7 1639 aa15.76■□□□□ 0.11
CLMN-204ENST00000555615 RIMBP3BA6NNM3 1639 aa15.76■□□□□ 0.11
CLMN-204ENST00000555615 RIMBP3Q9UFD9 1639 aa15.76■□□□□ 0.11
CLMN-204ENST00000555615 IFT140Q96RY7 1462 aa15.74■□□□□ 0.11
CLMN-204ENST00000555615 PRDM2Q13029 1718 aa15.72■□□□□ 0.11
CLMN-204ENST00000555615 ARHGEF11O15085 1522 aa15.71■□□□□ 0.11
CLMN-204ENST00000555615 ZNF608Q9ULD9 1512 aaPredicted RBP15.65■□□□□ 0.1
CLMN-204ENST00000555615 ABCC8Q09428 1581 aa15.64■□□□□ 0.09
CLMN-204ENST00000555615 TOPBP1Q92547 1522 aa15.61■□□□□ 0.09
CLMN-204ENST00000555615 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
CLMN-204ENST00000555615 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
CLMN-204ENST00000555615 CYB5RLQ6IPT4 315 aa15.56■□□□□ 0.08
CLMN-204ENST00000555615 DNMBPQ6XZF7 1577 aa15.56■□□□□ 0.08
CLMN-204ENST00000555615 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
CLMN-204ENST00000555615 CHD1O14646 1710 aa15.51■□□□□ 0.07
CLMN-204ENST00000555615 ARAP1Q96P48 1450 aa15.51■□□□□ 0.07
CLMN-204ENST00000555615 AQRO60306 1485 aaKnown RBP eCLIP15.47■□□□□ 0.07
CLMN-204ENST00000555615 TARBP1Q13395 1621 aaKnown RBP15.47■□□□□ 0.07
CLMN-204ENST00000555615 FBLN2P98095 1184 aa15.47■□□□□ 0.07
CLMN-204ENST00000555615 POLA1P09884 1462 aaPredicted RBP15.44■□□□□ 0.06
CLMN-204ENST00000555615 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
CLMN-204ENST00000555615 SYNJ1O43426 1573 aa15.38■□□□□ 0.05
CLMN-204ENST00000555615 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
CLMN-204ENST00000555615 SOGA1O94964 1423 aa15.35■□□□□ 0.05
CLMN-204ENST00000555615 MAGI1Q96QZ7 1491 aaPredicted RBP15.35■□□□□ 0.05
CLMN-204ENST00000555615 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
CLMN-204ENST00000555615 CHMP7Q8WUX9 453 aaPredicted RBP15.34■□□□□ 0.05
CLMN-204ENST00000555615 TDRD9Q8NDG6 1382 aaKnown RBP15.34■□□□□ 0.05
CLMN-204ENST00000555615 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.05
CLMN-204ENST00000555615 GRIN2BQ13224 1484 aa15.3■□□□□ 0.04
CLMN-204ENST00000555615 SYNJ2O15056 1496 aa15.29■□□□□ 0.04
CLMN-204ENST00000555615 FGD5Q6ZNL6 1462 aa15.29■□□□□ 0.04
CLMN-204ENST00000555615 EEA1Q15075 1411 aa15.26■□□□□ 0.03
CLMN-204ENST00000555615 GAPVD1Q14C86 1478 aa15.23■□□□□ 0.03
CLMN-204ENST00000555615 CUX1P39880 1505 aa15.2■□□□□ 0.02
CLMN-204ENST00000555615 WRNQ14191 1432 aaPredicted RBP eCLIP15.19■□□□□ 0.02
CLMN-204ENST00000555615 PBRM1Q86U86 1689 aa15.19■□□□□ 0.02
CLMN-204ENST00000555615 LOC105371045A0A1W2PR82 267 aa15.17■□□□□ 0.02
CLMN-204ENST00000555615 BIVM-ERCC5R4GMW8 1640 aa15.17■□□□□ 0.02
CLMN-204ENST00000555615 TOP2BQ02880 1626 aa15.14■□□□□ 0.01
CLMN-204ENST00000555615 ABCA10Q8WWZ4 1543 aa15.12■□□□□ 0.01
CLMN-204ENST00000555615 ABCA5Q8WWZ7 1642 aa15.11■□□□□ 0.01
CLMN-204ENST00000555615 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
CLMN-204ENST00000555615 KIF21BO75037 1637 aa15.06■□□□□ 0
CLMN-204ENST00000555615 ADAMTS12P58397 1594 aa15.04■□□□□ -0
CLMN-204ENST00000555615 CEP170Q5SW79 1584 aa15.04■□□□□ -0
CLMN-204ENST00000555615 NUP160Q12769 1436 aa15.04■□□□□ -0
CLMN-204ENST00000555615 ERCC6L2Q5T890 1561 aa15.01□□□□□ -0.01
CLMN-204ENST00000555615 FHAD1B1AJZ9 1412 aa15□□□□□ -0.01
CLMN-204ENST00000555615 SHROOM2Q13796 1616 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms