RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 NISCHQ9Y2I1 1504 aa31.52■■■□□ 2.64
DDX39A-218ENST00000592632 CCDC180Q9P1Z9 1646 aa27.93■■■□□ 2.06
DDX39A-218ENST00000592632 ABCC9O60706 1549 aa27.55■■■□□ 2
DDX39A-218ENST00000592632 DCAF8L2P0C7V8 631 aa26.4■■□□□ 1.82
DDX39A-218ENST00000592632 NACADO15069 1562 aa26.3■■□□□ 1.8
DDX39A-218ENST00000592632 RB1CC1Q8TDY2 1594 aa26.3■■□□□ 1.8
DDX39A-218ENST00000592632 ZCCHC6Q5VYS8 1495 aaKnown RBP26.23■■□□□ 1.79
DDX39A-218ENST00000592632 MYO15BQ96JP2 1530 aa26.15■■□□□ 1.78
DDX39A-218ENST00000592632 DCAF1Q9Y4B6 1507 aa26.05■■□□□ 1.76
DDX39A-218ENST00000592632 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
DDX39A-218ENST00000592632 UNC13AQ9UPW8 1703 aa25.73■■□□□ 1.71
DDX39A-218ENST00000592632 PABPN1Q86U42 306 aaKnown RBP eCLIP25.68■■□□□ 1.7
DDX39A-218ENST00000592632 BICRAQ9NZM4 1560 aa25.57■■□□□ 1.68
DDX39A-218ENST00000592632 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
DDX39A-218ENST00000592632 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
DDX39A-218ENST00000592632 EIF4G1Q04637 1599 aaKnown RBP24.85■■□□□ 1.57
DDX39A-218ENST00000592632 CC2D2AQ9P2K1 1620 aa24.84■■□□□ 1.57
DDX39A-218ENST00000592632 CECR2Q9BXF3 1484 aa24.81■■□□□ 1.56
DDX39A-218ENST00000592632 SMARCA4P51532 1647 aa24.42■■□□□ 1.5
DDX39A-218ENST00000592632 BAZ1AQ9NRL2 1556 aaPredicted RBP24.38■■□□□ 1.49
DDX39A-218ENST00000592632 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
DDX39A-218ENST00000592632 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
DDX39A-218ENST00000592632 MROH2BQ7Z745 1585 aa24.31■■□□□ 1.48
DDX39A-218ENST00000592632 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
DDX39A-218ENST00000592632 PEG3Q9GZU2 1588 aa24.18■■□□□ 1.46
DDX39A-218ENST00000592632 HMGXB3Q12766 1538 aa24.13■■□□□ 1.45
DDX39A-218ENST00000592632 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.45
DDX39A-218ENST00000592632 RSF1Q96T23 1441 aaPredicted RBP24.06■■□□□ 1.44
DDX39A-218ENST00000592632 WIZO95785 1651 aa24.02■■□□□ 1.44
DDX39A-218ENST00000592632 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
DDX39A-218ENST00000592632 CUX2O14529 1486 aa23.74■■□□□ 1.39
DDX39A-218ENST00000592632 TOP2AP11388 1531 aaKnown RBP23.74■■□□□ 1.39
DDX39A-218ENST00000592632 NESP48681 1621 aa23.73■■□□□ 1.39
DDX39A-218ENST00000592632 DNAJC5Q9H3Z4 198 aa23.73■■□□□ 1.39
DDX39A-218ENST00000592632 CADPSQ9ULU8 1353 aa23.62■■□□□ 1.37
DDX39A-218ENST00000592632 LAMC3Q9Y6N6 1575 aa23.61■■□□□ 1.37
DDX39A-218ENST00000592632 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
DDX39A-218ENST00000592632 SUPT5HO00267 1087 aaKnown RBP23.49■■□□□ 1.35
DDX39A-218ENST00000592632 PDS5BQ9NTI5 1447 aa23.49■■□□□ 1.35
DDX39A-218ENST00000592632 CFTRP13569 1480 aa23.46■■□□□ 1.35
DDX39A-218ENST00000592632 THOC2Q8NI27 1593 aaKnown RBP23.39■■□□□ 1.33
DDX39A-218ENST00000592632 KIF21AQ7Z4S6 1674 aa23.38■■□□□ 1.33
DDX39A-218ENST00000592632 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
DDX39A-218ENST00000592632 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
DDX39A-218ENST00000592632 MRC2Q9UBG0 1479 aa23.23■■□□□ 1.31
DDX39A-218ENST00000592632 PRDM2Q13029 1718 aa23.19■■□□□ 1.3
DDX39A-218ENST00000592632 WDR62O43379 1518 aa23.13■■□□□ 1.29
DDX39A-218ENST00000592632 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
DDX39A-218ENST00000592632 TOPBP1Q92547 1522 aa22.94■■□□□ 1.26
DDX39A-218ENST00000592632 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
DDX39A-218ENST00000592632 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.25
DDX39A-218ENST00000592632 CUX1P39880 1505 aa22.79■■□□□ 1.24
DDX39A-218ENST00000592632 IFT140Q96RY7 1462 aa22.78■■□□□ 1.24
DDX39A-218ENST00000592632 TRIM41Q8WV44 630 aa22.77■■□□□ 1.24
DDX39A-218ENST00000592632 POLA1P09884 1462 aaPredicted RBP22.75■■□□□ 1.23
DDX39A-218ENST00000592632 ZNF608Q9ULD9 1512 aaPredicted RBP22.72■■□□□ 1.23
DDX39A-218ENST00000592632 TARBP1Q13395 1621 aaKnown RBP22.69■■□□□ 1.22
DDX39A-218ENST00000592632 FGD5Q6ZNL6 1462 aa22.69■■□□□ 1.22
DDX39A-218ENST00000592632 RAD54L2Q9Y4B4 1467 aa22.69■■□□□ 1.22
DDX39A-218ENST00000592632 SOGA1O94964 1423 aa22.69■■□□□ 1.22
DDX39A-218ENST00000592632 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
DDX39A-218ENST00000592632 WRNQ14191 1432 aaPredicted RBP eCLIP22.64■■□□□ 1.213e-13■■■■■ 62.7
DDX39A-218ENST00000592632 AQRO60306 1485 aaKnown RBP eCLIP22.61■■□□□ 1.218e-23■■■■■ 120.9
DDX39A-218ENST00000592632 TDRD9Q8NDG6 1382 aaKnown RBP22.58■■□□□ 1.21
DDX39A-218ENST00000592632 SYNJ1O43426 1573 aa22.57■■□□□ 1.2
DDX39A-218ENST00000592632 TOP2BQ02880 1626 aa22.57■■□□□ 1.2
DDX39A-218ENST00000592632 BIVM-ERCC5R4GMW8 1640 aa22.55■■□□□ 1.2
DDX39A-218ENST00000592632 EIF4G3O43432 1585 aaKnown RBP22.55■■□□□ 1.2
DDX39A-218ENST00000592632 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
DDX39A-218ENST00000592632 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
DDX39A-218ENST00000592632 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
DDX39A-218ENST00000592632 GRIN2BQ13224 1484 aa22.39■■□□□ 1.17
DDX39A-218ENST00000592632 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
DDX39A-218ENST00000592632 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
DDX39A-218ENST00000592632 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
DDX39A-218ENST00000592632 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
DDX39A-218ENST00000592632 SNAPC4Q5SXM2 1469 aa22.34■■□□□ 1.17
DDX39A-218ENST00000592632 FBLN2P98095 1184 aa22.34■■□□□ 1.17
DDX39A-218ENST00000592632 MAGI1Q96QZ7 1491 aaPredicted RBP22.3■■□□□ 1.16
DDX39A-218ENST00000592632 ARHGEF11O15085 1522 aa22.29■■□□□ 1.16
DDX39A-218ENST00000592632 PBRM1Q86U86 1689 aa22.29■■□□□ 1.16
DDX39A-218ENST00000592632 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
DDX39A-218ENST00000592632 CHD1O14646 1710 aa22.28■■□□□ 1.16
DDX39A-218ENST00000592632 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
DDX39A-218ENST00000592632 ERICH3Q5RHP9 1530 aa22.18■■□□□ 1.14
DDX39A-218ENST00000592632 KIF27Q86VH2 1401 aa22.17■■□□□ 1.14
DDX39A-218ENST00000592632 IGF1RP08069 1367 aa22.15■■□□□ 1.14
DDX39A-218ENST00000592632 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.14
DDX39A-218ENST00000592632 CYB5RLQ6IPT4 315 aa22.13■■□□□ 1.13
DDX39A-218ENST00000592632 ADAMTS12P58397 1594 aa22.12■■□□□ 1.13
DDX39A-218ENST00000592632 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
DDX39A-218ENST00000592632 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
DDX39A-218ENST00000592632 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
DDX39A-218ENST00000592632 RUSC2Q8N2Y8 1516 aa22.04■■□□□ 1.12
DDX39A-218ENST00000592632 NUP160Q12769 1436 aa22.01■■□□□ 1.11
DDX39A-218ENST00000592632 CARMIL1Q5VZK9 1371 aa21.99■■□□□ 1.11
DDX39A-218ENST00000592632 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
DDX39A-218ENST00000592632 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
DDX39A-218ENST00000592632 CUL7Q14999 1698 aa21.95■■□□□ 1.1
DDX39A-218ENST00000592632 TRHP20396 242 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms