RNA–Protein interactions for RNA: ENST00000485554.5

LRCH4-205, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 3

Gene LRCH4, Length 774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-205ENST00000485554 NISCHQ9Y2I1 1504 aa44.47■■■■■ 4.71
LRCH4-205ENST00000485554 ABCC9O60706 1549 aa40.04■■■■■ 4
LRCH4-205ENST00000485554 CCDC180Q9P1Z9 1646 aa39.91■■■■□ 3.98
LRCH4-205ENST00000485554 RB1CC1Q8TDY2 1594 aa38.03■■■■□ 3.68
LRCH4-205ENST00000485554 DCAF8L2P0C7V8 631 aa37.76■■■■□ 3.64
LRCH4-205ENST00000485554 NACADO15069 1562 aa37.72■■■■□ 3.63
LRCH4-205ENST00000485554 DNAJC5BQ9UF47 199 aa37.51■■■■□ 3.6
LRCH4-205ENST00000485554 PABPN1Q86U42 306 aaKnown RBP eCLIP37.3■■■■□ 3.56
LRCH4-205ENST00000485554 UNC13AQ9UPW8 1703 aa37.19■■■■□ 3.54
LRCH4-205ENST00000485554 MYO15BQ96JP2 1530 aa37.1■■■■□ 3.53
LRCH4-205ENST00000485554 BICRAQ9NZM4 1560 aa36.88■■■■□ 3.49
LRCH4-205ENST00000485554 ZCCHC6Q5VYS8 1495 aaKnown RBP36.84■■■■□ 3.49
LRCH4-205ENST00000485554 DCAF1Q9Y4B6 1507 aa36.65■■■■□ 3.46
LRCH4-205ENST00000485554 SCRIBQ14160 1630 aa36.48■■■■□ 3.43
LRCH4-205ENST00000485554 SHROOM4Q9ULL8 1493 aa36.32■■■■□ 3.41
LRCH4-205ENST00000485554 CC2D2AQ9P2K1 1620 aa36.12■■■■□ 3.37
LRCH4-205ENST00000485554 CECR2Q9BXF3 1484 aa36.04■■■■□ 3.36
LRCH4-205ENST00000485554 EIF4G1Q04637 1599 aaKnown RBP36.02■■■■□ 3.36
LRCH4-205ENST00000485554 NCAPD3P42695 1498 aa34.8■■■■□ 3.16
LRCH4-205ENST00000485554 ATAD2BQ9ULI0 1458 aa34.74■■■■□ 3.15
LRCH4-205ENST00000485554 SMARCA4P51532 1647 aa34.73■■■■□ 3.15
LRCH4-205ENST00000485554 SMARCA2P51531 1590 aa34.65■■■■□ 3.14
LRCH4-205ENST00000485554 ERCC6Q03468 1493 aa34.6■■■■□ 3.13
LRCH4-205ENST00000485554 HMGXB3Q12766 1538 aa34.56■■■■□ 3.12
LRCH4-205ENST00000485554 BAZ1AQ9NRL2 1556 aaPredicted RBP34.54■■■■□ 3.12
LRCH4-205ENST00000485554 BAZ1BQ9UIG0 1483 aaKnown RBP34.46■■■■□ 3.11
LRCH4-205ENST00000485554 DNAJC5Q9H3Z4 198 aa34.45■■■■□ 3.11
LRCH4-205ENST00000485554 CUX2O14529 1486 aa34.43■■■■□ 3.1
LRCH4-205ENST00000485554 NESP48681 1621 aa34.37■■■■□ 3.09
LRCH4-205ENST00000485554 MROH2BQ7Z745 1585 aa34.3■■■■□ 3.08
LRCH4-205ENST00000485554 PEG3Q9GZU2 1588 aa34.3■■■■□ 3.08
LRCH4-205ENST00000485554 LAMC3Q9Y6N6 1575 aa34.06■■■■□ 3.04
LRCH4-205ENST00000485554 THOC2Q8NI27 1593 aaKnown RBP33.98■■■■□ 3.03
LRCH4-205ENST00000485554 KIF21AQ7Z4S6 1674 aa33.93■■■■□ 3.02
LRCH4-205ENST00000485554 WIZO95785 1651 aa33.93■■■■□ 3.02
LRCH4-205ENST00000485554 PDS5BQ9NTI5 1447 aa33.89■■■■□ 3.02
LRCH4-205ENST00000485554 CADPSQ9ULU8 1353 aa33.79■■■■□ 3
LRCH4-205ENST00000485554 MRC2Q9UBG0 1479 aa33.61■■■□□ 2.97
LRCH4-205ENST00000485554 RSF1Q96T23 1441 aaPredicted RBP33.56■■■□□ 2.96
LRCH4-205ENST00000485554 CEP164Q9UPV0 1460 aa33.5■■■□□ 2.95
LRCH4-205ENST00000485554 WDR62O43379 1518 aa33.49■■■□□ 2.95
LRCH4-205ENST00000485554 TOP2AP11388 1531 aaKnown RBP33.45■■■□□ 2.95
LRCH4-205ENST00000485554 FANCD2Q9BXW9 1451 aa33.44■■■□□ 2.94
LRCH4-205ENST00000485554 CFTRP13569 1480 aa33.37■■■□□ 2.93
LRCH4-205ENST00000485554 URB2Q14146 1524 aaKnown RBP33.16■■■□□ 2.9
LRCH4-205ENST00000485554 TRIM41Q8WV44 630 aa33.1■■■□□ 2.89
LRCH4-205ENST00000485554 PRDM2Q13029 1718 aa33.09■■■□□ 2.89
LRCH4-205ENST00000485554 CCDC88BA6NC98 1476 aa33.08■■■□□ 2.89
LRCH4-205ENST00000485554 OSCARQ8IYS5 282 aa32.91■■■□□ 2.86
LRCH4-205ENST00000485554 TOPBP1Q92547 1522 aa32.8■■■□□ 2.84
LRCH4-205ENST00000485554 IFT140Q96RY7 1462 aa32.8■■■□□ 2.84
LRCH4-205ENST00000485554 ZNF608Q9ULD9 1512 aaPredicted RBP32.77■■■□□ 2.84
LRCH4-205ENST00000485554 ABCC8Q09428 1581 aa32.69■■■□□ 2.82
LRCH4-205ENST00000485554 DNMBPQ6XZF7 1577 aa32.67■■■□□ 2.82
LRCH4-205ENST00000485554 EIF4G3O43432 1585 aaKnown RBP32.6■■■□□ 2.81
LRCH4-205ENST00000485554 RIMBP3CA6NJZ7 1639 aa32.49■■■□□ 2.79
LRCH4-205ENST00000485554 RIMBP3BA6NNM3 1639 aa32.49■■■□□ 2.79
LRCH4-205ENST00000485554 RIMBP3Q9UFD9 1639 aa32.49■■■□□ 2.79
LRCH4-205ENST00000485554 AQRO60306 1485 aaKnown RBP eCLIP32.48■■■□□ 2.794e-9■■■□□ 16.6
LRCH4-205ENST00000485554 TARBP1Q13395 1621 aaKnown RBP32.48■■■□□ 2.79
LRCH4-205ENST00000485554 POLA1P09884 1462 aaPredicted RBP32.46■■■□□ 2.79
LRCH4-205ENST00000485554 FBLN2P98095 1184 aa32.39■■■□□ 2.78
LRCH4-205ENST00000485554 CHD1O14646 1710 aa32.39■■■□□ 2.78
LRCH4-205ENST00000485554 RAD54L2Q9Y4B4 1467 aa32.38■■■□□ 2.77
LRCH4-205ENST00000485554 ARHGEF11O15085 1522 aa32.36■■■□□ 2.77
LRCH4-205ENST00000485554 SOGA1O94964 1423 aa32.34■■■□□ 2.77
LRCH4-205ENST00000485554 TDRD9Q8NDG6 1382 aaKnown RBP32.31■■■□□ 2.76
LRCH4-205ENST00000485554 FGD5Q6ZNL6 1462 aa32.28■■■□□ 2.76
LRCH4-205ENST00000485554 SUPT5HO00267 1087 aaKnown RBP32.23■■■□□ 2.75
LRCH4-205ENST00000485554 CUX1P39880 1505 aa32.22■■■□□ 2.75
LRCH4-205ENST00000485554 CYB5RLQ6IPT4 315 aa32.2■■■□□ 2.75
LRCH4-205ENST00000485554 SNAPC4Q5SXM2 1469 aa32.16■■■□□ 2.74
LRCH4-205ENST00000485554 WDR97A6NE52 1622 aa32.11■■■□□ 2.73
LRCH4-205ENST00000485554 CHMP7Q8WUX9 453 aaPredicted RBP32.08■■■□□ 2.73
LRCH4-205ENST00000485554 ARAP1Q96P48 1450 aa32.04■■■□□ 2.72
LRCH4-205ENST00000485554 GRIN2BQ13224 1484 aa32.03■■■□□ 2.72
LRCH4-205ENST00000485554 MAGI1Q96QZ7 1491 aaPredicted RBP32.02■■■□□ 2.72
LRCH4-205ENST00000485554 SYNJ1O43426 1573 aa31.97■■■□□ 2.71
LRCH4-205ENST00000485554 PBRM1Q86U86 1689 aa31.95■■■□□ 2.71
LRCH4-205ENST00000485554 GAPVD1Q14C86 1478 aa31.94■■■□□ 2.7
LRCH4-205ENST00000485554 SYNJ2O15056 1496 aa31.93■■■□□ 2.7
LRCH4-205ENST00000485554 CLASP1Q7Z460 1538 aa31.93■■■□□ 2.7
LRCH4-205ENST00000485554 TRHP20396 242 aaPredicted RBP31.91■■■□□ 2.7
LRCH4-205ENST00000485554 ABCA10Q8WWZ4 1543 aa31.85■■■□□ 2.69
LRCH4-205ENST00000485554 ABCA5Q8WWZ7 1642 aa31.83■■■□□ 2.69
LRCH4-205ENST00000485554 WRNQ14191 1432 aaPredicted RBP eCLIP31.76■■■□□ 2.683e-9■■■■□ 25.1
LRCH4-205ENST00000485554 TOP2BQ02880 1626 aa31.69■■■□□ 2.66
LRCH4-205ENST00000485554 BIVM-ERCC5R4GMW8 1640 aa31.69■■■□□ 2.66
LRCH4-205ENST00000485554 GRIN2AQ12879 1464 aa31.63■■■□□ 2.65
LRCH4-205ENST00000485554 ADAMTS12P58397 1594 aa31.61■■■□□ 2.65
LRCH4-205ENST00000485554 CEP170Q5SW79 1584 aa31.52■■■□□ 2.64
LRCH4-205ENST00000485554 FHAD1B1AJZ9 1412 aa31.51■■■□□ 2.64
LRCH4-205ENST00000485554 ERCC6L2Q5T890 1561 aa31.5■■■□□ 2.63
LRCH4-205ENST00000485554 NUP160Q12769 1436 aa31.48■■■□□ 2.63
LRCH4-205ENST00000485554 ERICH3Q5RHP9 1530 aa31.46■■■□□ 2.63
LRCH4-205ENST00000485554 SHROOM2Q13796 1616 aa31.34■■■□□ 2.61
LRCH4-205ENST00000485554 PRG4Q92954 1404 aaPredicted RBP31.25■■■□□ 2.59
LRCH4-205ENST00000485554 JPH4Q96JJ6 628 aa31.21■■■□□ 2.59
LRCH4-205ENST00000485554 RUSC2Q8N2Y8 1516 aa31.17■■■□□ 2.58
LRCH4-205ENST00000485554 KIF27Q86VH2 1401 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms