RNA–Protein interactions for RNA: ENST00000417500.5

ARPC4-202, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 5

Gene ARPC4, Length 957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-202ENST00000417500 NISCHQ9Y2I1 1504 aa48.03■■■■■ 5.28
ARPC4-202ENST00000417500 CCDC180Q9P1Z9 1646 aa42.92■■■■■ 4.46
ARPC4-202ENST00000417500 ABCC9O60706 1549 aa42.68■■■■■ 4.42
ARPC4-202ENST00000417500 RB1CC1Q8TDY2 1594 aa40.78■■■■■ 4.12
ARPC4-202ENST00000417500 DCAF8L2P0C7V8 631 aa40.65■■■■■ 4.1
ARPC4-202ENST00000417500 NACADO15069 1562 aa40.57■■■■■ 4.08
ARPC4-202ENST00000417500 MYO15BQ96JP2 1530 aa40.08■■■■■ 4.01
ARPC4-202ENST00000417500 ZCCHC6Q5VYS8 1495 aaKnown RBP39.85■■■■□ 3.97
ARPC4-202ENST00000417500 PABPN1Q86U42 306 aaKnown RBP eCLIP39.84■■■■□ 3.97
ARPC4-202ENST00000417500 DCAF1Q9Y4B6 1507 aa39.68■■■■□ 3.94
ARPC4-202ENST00000417500 UNC13AQ9UPW8 1703 aa39.68■■■■□ 3.94
ARPC4-202ENST00000417500 DNAJC5BQ9UF47 199 aa39.66■■■■□ 3.94
ARPC4-202ENST00000417500 BICRAQ9NZM4 1560 aa39.43■■■■□ 3.9
ARPC4-202ENST00000417500 SCRIBQ14160 1630 aa39.18■■■■□ 3.86
ARPC4-202ENST00000417500 SHROOM4Q9ULL8 1493 aa39.06■■■■□ 3.84
ARPC4-202ENST00000417500 EIF4G1Q04637 1599 aaKnown RBP38.52■■■■□ 3.76
ARPC4-202ENST00000417500 CC2D2AQ9P2K1 1620 aa38.52■■■■□ 3.76
ARPC4-202ENST00000417500 CECR2Q9BXF3 1484 aa38.42■■■■□ 3.74
ARPC4-202ENST00000417500 NCAPD3P42695 1498 aa37.44■■■■□ 3.58
ARPC4-202ENST00000417500 SMARCA4P51532 1647 aa37.38■■■■□ 3.57
ARPC4-202ENST00000417500 ATAD2BQ9ULI0 1458 aa37.36■■■■□ 3.57
ARPC4-202ENST00000417500 SMARCA2P51531 1590 aa37.32■■■■□ 3.56
ARPC4-202ENST00000417500 BAZ1AQ9NRL2 1556 aaPredicted RBP37.3■■■■□ 3.56
ARPC4-202ENST00000417500 HMGXB3Q12766 1538 aa37.16■■■■□ 3.54
ARPC4-202ENST00000417500 BAZ1BQ9UIG0 1483 aaKnown RBP37.08■■■■□ 3.53
ARPC4-202ENST00000417500 MROH2BQ7Z745 1585 aa37■■■■□ 3.51
ARPC4-202ENST00000417500 PEG3Q9GZU2 1588 aa36.98■■■■□ 3.51
ARPC4-202ENST00000417500 ERCC6Q03468 1493 aa36.93■■■■□ 3.5
ARPC4-202ENST00000417500 NESP48681 1621 aa36.7■■■■□ 3.47
ARPC4-202ENST00000417500 CUX2O14529 1486 aa36.67■■■■□ 3.46
ARPC4-202ENST00000417500 WIZO95785 1651 aa36.55■■■■□ 3.44
ARPC4-202ENST00000417500 LAMC3Q9Y6N6 1575 aa36.55■■■■□ 3.44
ARPC4-202ENST00000417500 PDS5BQ9NTI5 1447 aa36.42■■■■□ 3.42
ARPC4-202ENST00000417500 RSF1Q96T23 1441 aaPredicted RBP36.39■■■■□ 3.42
ARPC4-202ENST00000417500 CADPSQ9ULU8 1353 aa36.37■■■■□ 3.41
ARPC4-202ENST00000417500 DNAJC5Q9H3Z4 198 aa36.28■■■■□ 3.4
ARPC4-202ENST00000417500 THOC2Q8NI27 1593 aaKnown RBP36.21■■■■□ 3.39
ARPC4-202ENST00000417500 KIF21AQ7Z4S6 1674 aa36.2■■■■□ 3.39
ARPC4-202ENST00000417500 TOP2AP11388 1531 aaKnown RBP36.16■■■■□ 3.38
ARPC4-202ENST00000417500 MRC2Q9UBG0 1479 aa36.01■■■■□ 3.36
ARPC4-202ENST00000417500 CFTRP13569 1480 aa35.97■■■■□ 3.35
ARPC4-202ENST00000417500 CEP164Q9UPV0 1460 aa35.96■■■■□ 3.35
ARPC4-202ENST00000417500 FANCD2Q9BXW9 1451 aa35.93■■■■□ 3.34
ARPC4-202ENST00000417500 WDR62O43379 1518 aa35.85■■■■□ 3.33
ARPC4-202ENST00000417500 CCDC88BA6NC98 1476 aa35.76■■■■□ 3.32
ARPC4-202ENST00000417500 PRDM2Q13029 1718 aa35.56■■■■□ 3.28
ARPC4-202ENST00000417500 URB2Q14146 1524 aaKnown RBP35.55■■■■□ 3.28
ARPC4-202ENST00000417500 ABCC8Q09428 1581 aa35.3■■■■□ 3.24
ARPC4-202ENST00000417500 TOPBP1Q92547 1522 aa35.26■■■■□ 3.23
ARPC4-202ENST00000417500 IFT140Q96RY7 1462 aa35.23■■■■□ 3.23
ARPC4-202ENST00000417500 SUPT5HO00267 1087 aaKnown RBP35.2■■■■□ 3.23
ARPC4-202ENST00000417500 OSCARQ8IYS5 282 aa35.16■■■■□ 3.22
ARPC4-202ENST00000417500 DNMBPQ6XZF7 1577 aa35.16■■■■□ 3.22
ARPC4-202ENST00000417500 ZNF608Q9ULD9 1512 aaPredicted RBP35.06■■■■□ 3.2
ARPC4-202ENST00000417500 TRIM41Q8WV44 630 aa34.93■■■■□ 3.18
ARPC4-202ENST00000417500 POLA1P09884 1462 aaPredicted RBP34.92■■■■□ 3.18
ARPC4-202ENST00000417500 EIF4G3O43432 1585 aaKnown RBP34.87■■■■□ 3.17
ARPC4-202ENST00000417500 TARBP1Q13395 1621 aaKnown RBP34.85■■■■□ 3.17
ARPC4-202ENST00000417500 SOGA1O94964 1423 aa34.85■■■■□ 3.17
ARPC4-202ENST00000417500 AQRO60306 1485 aaKnown RBP eCLIP34.84■■■■□ 3.173e-6■■■■□ 22.1
ARPC4-202ENST00000417500 RAD54L2Q9Y4B4 1467 aa34.79■■■■□ 3.16
ARPC4-202ENST00000417500 FGD5Q6ZNL6 1462 aa34.77■■■■□ 3.16
ARPC4-202ENST00000417500 CUX1P39880 1505 aa34.74■■■■□ 3.15
ARPC4-202ENST00000417500 TDRD9Q8NDG6 1382 aaKnown RBP34.72■■■■□ 3.15
ARPC4-202ENST00000417500 FBLN2P98095 1184 aa34.71■■■■□ 3.15
ARPC4-202ENST00000417500 WDR97A6NE52 1622 aa34.59■■■■□ 3.13
ARPC4-202ENST00000417500 CHD1O14646 1710 aa34.53■■■■□ 3.12
ARPC4-202ENST00000417500 SNAPC4Q5SXM2 1469 aa34.5■■■■□ 3.11
ARPC4-202ENST00000417500 CHMP7Q8WUX9 453 aaPredicted RBP34.49■■■■□ 3.11
ARPC4-202ENST00000417500 GRIN2BQ13224 1484 aa34.49■■■■□ 3.11
ARPC4-202ENST00000417500 RIMBP3CA6NJZ7 1639 aa34.48■■■■□ 3.11
ARPC4-202ENST00000417500 RIMBP3BA6NNM3 1639 aa34.48■■■■□ 3.11
ARPC4-202ENST00000417500 RIMBP3Q9UFD9 1639 aa34.48■■■■□ 3.11
ARPC4-202ENST00000417500 ARHGEF11O15085 1522 aa34.45■■■■□ 3.1
ARPC4-202ENST00000417500 MAGI1Q96QZ7 1491 aaPredicted RBP34.44■■■■□ 3.1
ARPC4-202ENST00000417500 GAPVD1Q14C86 1478 aa34.4■■■■□ 3.1
ARPC4-202ENST00000417500 WRNQ14191 1432 aaPredicted RBP eCLIP34.4■■■■□ 3.1
ARPC4-202ENST00000417500 ABCA10Q8WWZ4 1543 aa34.38■■■■□ 3.09
ARPC4-202ENST00000417500 SYNJ2O15056 1496 aa34.32■■■■□ 3.08
ARPC4-202ENST00000417500 CYB5RLQ6IPT4 315 aa34.3■■■■□ 3.08
ARPC4-202ENST00000417500 TOP2BQ02880 1626 aa34.29■■■■□ 3.08
ARPC4-202ENST00000417500 PBRM1Q86U86 1689 aa34.27■■■■□ 3.08
ARPC4-202ENST00000417500 SYNJ1O43426 1573 aa34.27■■■■□ 3.08
ARPC4-202ENST00000417500 BIVM-ERCC5R4GMW8 1640 aa34.26■■■■□ 3.07
ARPC4-202ENST00000417500 ABCA5Q8WWZ7 1642 aa34.23■■■■□ 3.07
ARPC4-202ENST00000417500 CLASP1Q7Z460 1538 aa34.14■■■■□ 3.06
ARPC4-202ENST00000417500 ARAP1Q96P48 1450 aa34.11■■■■□ 3.05
ARPC4-202ENST00000417500 GRIN2AQ12879 1464 aa34.01■■■■□ 3.03
ARPC4-202ENST00000417500 FHAD1B1AJZ9 1412 aa34■■■■□ 3.03
ARPC4-202ENST00000417500 ADAMTS12P58397 1594 aa33.98■■■■□ 3.03
ARPC4-202ENST00000417500 ERICH3Q5RHP9 1530 aa33.97■■■■□ 3.03
ARPC4-202ENST00000417500 TRHP20396 242 aaPredicted RBP33.89■■■■□ 3.02
ARPC4-202ENST00000417500 NUP160Q12769 1436 aa33.86■■■■□ 3.01
ARPC4-202ENST00000417500 CEP170Q5SW79 1584 aa33.81■■■■□ 3
ARPC4-202ENST00000417500 KIF27Q86VH2 1401 aa33.75■■■□□ 2.99
ARPC4-202ENST00000417500 IGF1RP08069 1367 aa33.63■■■□□ 2.97
ARPC4-202ENST00000417500 JPH4Q96JJ6 628 aa33.63■■■□□ 2.97
ARPC4-202ENST00000417500 ERCC6L2Q5T890 1561 aa33.63■■■□□ 2.97
ARPC4-202ENST00000417500 SHROOM2Q13796 1616 aa33.6■■■□□ 2.97
ARPC4-202ENST00000417500 PRG4Q92954 1404 aaPredicted RBP33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms