Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 TPT1-205ENST00000442760 902 ntTSL 218.15■□□□□ 0.53e-29■□□□□ 9.8
LARP4Q71RC2 TPT1-208ENST00000527226 613 ntTSL 213.72□□□□□ -0.213e-29■□□□□ 9.8
LARP4Q71RC2 TPT1-212ENST00000530705 4735 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.573e-29■□□□□ 9.8
LARP4Q71RC2 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC11.12□□□□□ -0.633e-29■□□□□ 9.8
LARP4Q71RC2 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC11.02□□□□□ -0.653e-29■□□□□ 9.8
LARP4Q71RC2 TPT1-214ENST00000616577 4814 ntTSL 3 BASIC10.05□□□□□ -0.83e-29■□□□□ 9.8
LARP4Q71RC2 TPT1-207ENST00000490277 1851 ntTSL 28.11□□□□□ -1.113e-29■□□□□ 9.8
LARP4Q71RC2 TPT1-210ENST00000529421 801 ntTSL 36.94□□□□□ -1.33e-29■□□□□ 9.8
LARP4Q71RC2 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.45□□□□□ -1.383e-29■□□□□ 9.8
LARP4Q71RC2 TPT1-213ENST00000533567 594 ntTSL 34.97□□□□□ -1.613e-29■□□□□ 9.8
LARP4Q71RC2 RPS6-205ENST00000498815 480 ntTSL 24.77□□□□□ -1.652e-29■□□□□ 9.8
LARP4Q71RC2 SCARB1-209ENST00000545305 851 ntTSL 213.26□□□□□ -0.291e-8■□□□□ 9.8
LARP4Q71RC2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.392e-30■□□□□ 9.8
LARP4Q71RC2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.182e-30■□□□□ 9.8
LARP4Q71RC2 CUX1-209ENST00000487284 1566 ntTSL 213.84□□□□□ -0.191e-7■□□□□ 9.8
LARP4Q71RC2 CUX1-218ENST00000560541 3176 ntTSL 511.29□□□□□ -0.61e-7■□□□□ 9.8
LARP4Q71RC2 CUX1-217ENST00000558836 2965 ntTSL 510.55□□□□□ -0.721e-7■□□□□ 9.8
LARP4Q71RC2 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.568e-12■□□□□ 9.8
LARP4Q71RC2 PLOD1-209ENST00000491536 639 ntTSL 310.25□□□□□ -0.778e-12■□□□□ 9.8
LARP4Q71RC2 PLOD1-207ENST00000481933 2339 ntTSL 29.99□□□□□ -0.818e-12■□□□□ 9.8
LARP4Q71RC2 CNIH4-208ENST00000477413 820 ntTSL 520.6■□□□□ 0.892e-6■□□□□ 9.8
LARP4Q71RC2 GPR108-211ENST00000597706 1834 ntTSL 520■□□□□ 0.792e-6■□□□□ 9.8
LARP4Q71RC2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.792e-6■□□□□ 9.8
LARP4Q71RC2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.792e-6■□□□□ 9.8
LARP4Q71RC2 ATIC-207ENST00000443953 2187 ntTSL 219.95■□□□□ 0.782e-10■□□□□ 9.8
LARP4Q71RC2 UQCRC1-202ENST00000412343 778 ntTSL 319.65■□□□□ 0.742e-6■□□□□ 9.8
LARP4Q71RC2 TIMM50-209ENST00000597666 604 ntTSL 319.61■□□□□ 0.732e-6■□□□□ 9.8
LARP4Q71RC2 TIMM50-218ENST00000602028 770 ntTSL 519.61■□□□□ 0.732e-6■□□□□ 9.8
LARP4Q71RC2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.2■□□□□ 0.662e-10■□□□□ 9.8
LARP4Q71RC2 GUK1-213ENST00000453943 656 ntTSL 1 (best)19.03■□□□□ 0.642e-6■□□□□ 9.8
LARP4Q71RC2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.612e-6■□□□□ 9.8
LARP4Q71RC2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.62e-6■□□□□ 9.8
LARP4Q71RC2 SHROOM1-204ENST00000440118 1080 ntTSL 218.14■□□□□ 0.492e-6■□□□□ 9.8
LARP4Q71RC2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18■□□□□ 0.477e-8■□□□□ 9.8
LARP4Q71RC2 CORO1B-204ENST00000537042 1954 ntTSL 517.91■□□□□ 0.462e-6■□□□□ 9.8
LARP4Q71RC2 GUK1-239ENST00000498115 796 ntTSL 517.88■□□□□ 0.452e-6■□□□□ 9.8
LARP4Q71RC2 GPR108-208ENST00000595908 1750 ntTSL 517.87■□□□□ 0.452e-6■□□□□ 9.8
LARP4Q71RC2 TIMM50-217ENST00000601403 769 ntTSL 517.49■□□□□ 0.392e-6■□□□□ 9.8
LARP4Q71RC2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.392e-6■□□□□ 9.8
LARP4Q71RC2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.342e-6■□□□□ 9.8
LARP4Q71RC2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.84■□□□□ 0.292e-6■□□□□ 9.8
LARP4Q71RC2 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.49■□□□□ 0.232e-6■□□□□ 9.8
LARP4Q71RC2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.182e-6■□□□□ 9.8
LARP4Q71RC2 CCS-205ENST00000530384 1196 ntTSL 515.63■□□□□ 0.092e-6■□□□□ 9.8
LARP4Q71RC2 FBXL5-208ENST00000510802 532 ntTSL 515.5■□□□□ 0.072e-6■□□□□ 9.8
LARP4Q71RC2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.16■□□□□ 0.022e-6■□□□□ 9.8
LARP4Q71RC2 FBXL5-206ENST00000507899 741 ntTSL 515.1■□□□□ 0.012e-6■□□□□ 9.8
LARP4Q71RC2 FBXL5-212ENST00000514541 592 ntTSL 415.1■□□□□ 0.012e-6■□□□□ 9.8
LARP4Q71RC2 FBXL5-213ENST00000515679 591 ntTSL 315.1■□□□□ 0.012e-6■□□□□ 9.8
LARP4Q71RC2 BUD31-204ENST00000431419 608 ntTSL 314.62□□□□□ -0.072e-6■□□□□ 9.8
LARP4Q71RC2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.12e-6■□□□□ 9.8
LARP4Q71RC2 CCS-206ENST00000530961 1214 ntTSL 514.27□□□□□ -0.132e-6■□□□□ 9.8
LARP4Q71RC2 GUK1-216ENST00000464858 633 ntTSL 314.12□□□□□ -0.152e-6■□□□□ 9.8
LARP4Q71RC2 UQCRC1-204ENST00000460105 622 ntTSL 214.05□□□□□ -0.162e-6■□□□□ 9.8
LARP4Q71RC2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.162e-6■□□□□ 9.8
LARP4Q71RC2 GPR108-213ENST00000598626 619 ntTSL 314.02□□□□□ -0.172e-6■□□□□ 9.8
LARP4Q71RC2 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.75□□□□□ -0.217e-8■□□□□ 9.8
LARP4Q71RC2 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.222e-6■□□□□ 9.8
LARP4Q71RC2 UQCRC1-208ENST00000472438 477 ntTSL 213.66□□□□□ -0.222e-6■□□□□ 9.8
LARP4Q71RC2 GPR108-205ENST00000594500 523 ntTSL 313.58□□□□□ -0.242e-6■□□□□ 9.8
LARP4Q71RC2 GPR108-203ENST00000537722 619 ntTSL 1 (best)13.58□□□□□ -0.242e-6■□□□□ 9.8
LARP4Q71RC2 C3-213ENST00000600744 708 ntTSL 513.24□□□□□ -0.292e-6■□□□□ 9.8
LARP4Q71RC2 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.07□□□□□ -0.322e-6■□□□□ 9.8
LARP4Q71RC2 CORO1B-209ENST00000616321 4464 ntTSL 212.83□□□□□ -0.362e-6■□□□□ 9.8
LARP4Q71RC2 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.372e-6■□□□□ 9.8
LARP4Q71RC2 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.72□□□□□ -0.372e-6■□□□□ 9.8
LARP4Q71RC2 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.382e-6■□□□□ 9.8
LARP4Q71RC2 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.412e-10■□□□□ 9.8
LARP4Q71RC2 APEH-213ENST00000480772 703 ntTSL 211.87□□□□□ -0.512e-6■□□□□ 9.8
LARP4Q71RC2 EEF1D-214ENST00000526135 535 ntTSL 211.75□□□□□ -0.532e-6■□□□□ 9.8
LARP4Q71RC2 GPR108-204ENST00000594034 778 ntTSL 311.6□□□□□ -0.552e-6■□□□□ 9.8
LARP4Q71RC2 CCS-202ENST00000525435 798 ntTSL 211.56□□□□□ -0.562e-6■□□□□ 9.8
LARP4Q71RC2 SETD3-205ENST00000446066 1754 ntTSL 511.48□□□□□ -0.572e-6■□□□□ 9.8
LARP4Q71RC2 MRPL38-207ENST00000477023 446 ntTSL 310.23□□□□□ -0.772e-6■□□□□ 9.8
LARP4Q71RC2 ZC3H7A-201ENST00000355758 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.832e-6■□□□□ 9.8
LARP4Q71RC2 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC9.5□□□□□ -0.892e-6■□□□□ 9.8
LARP4Q71RC2 GPHA2-203ENST00000533257 582 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.892e-6■□□□□ 9.8
LARP4Q71RC2 MRPL38-208ENST00000477371 566 ntTSL 29.46□□□□□ -0.92e-6■□□□□ 9.8
LARP4Q71RC2 ATIC-206ENST00000442048 442 ntTSL 37.25□□□□□ -1.252e-10■□□□□ 9.8
LARP4Q71RC2 ZC3H7A-204ENST00000570918 1410 ntTSL 1 (best)7.21□□□□□ -1.252e-6■□□□□ 9.8
LARP4Q71RC2 ZC3H7A-206ENST00000571405 1930 ntTSL 27.03□□□□□ -1.282e-6■□□□□ 9.8
LARP4Q71RC2 ATIC-213ENST00000479093 772 ntTSL 26□□□□□ -1.452e-10■□□□□ 9.8
LARP4Q71RC2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.68□□□□□ -1.52e-6■□□□□ 9.8
LARP4Q71RC2 ATIC-212ENST00000478734 486 ntTSL 25.05□□□□□ -1.62e-10■□□□□ 9.8
LARP4Q71RC2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.72e-6■□□□□ 9.8
LARP4Q71RC2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.135e-7■□□□□ 9.8
LARP4Q71RC2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.85e-7■□□□□ 9.8
LARP4Q71RC2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.555e-7■□□□□ 9.8
LARP4Q71RC2 CKLF-207ENST00000534692 546 ntTSL 321.11■□□□□ 0.971e-8■□□□□ 9.8
LARP4Q71RC2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.28■□□□□ 0.841e-8■□□□□ 9.8
LARP4Q71RC2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.561e-8■□□□□ 9.8
LARP4Q71RC2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.541e-8■□□□□ 9.8
LARP4Q71RC2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.191e-8■□□□□ 9.8
LARP4Q71RC2 CKLF-CMTM1-202ENST00000527845 504 ntTSL 315.87■□□□□ 0.131e-8■□□□□ 9.8
LARP4Q71RC2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.071e-8■□□□□ 9.8
LARP4Q71RC2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.231e-8■□□□□ 9.8
LARP4Q71RC2 CKLF-CMTM1-201ENST00000527729 585 ntAPPRIS P3 TSL 2 BASIC9.36□□□□□ -0.911e-8■□□□□ 9.8
LARP4Q71RC2 CKLF-CMTM1-205ENST00000615332 395 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.921e-8■□□□□ 9.8
LARP4Q71RC2 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.471e-8■□□□□ 9.8
LARP4Q71RC2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.39■□□□□ 0.692e-7■□□□□ 9.8
Retrieved 100 of 15,922 protein–RNA pairs in 334.8 ms