RNA–Protein interactions for RNA: ENST00000491536.5

PLOD1-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, humanhuman

TSL 3

Gene PLOD1, Length 639 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD1-209ENST00000491536 NISCHQ9Y2I1 1504 aa23.4■■□□□ 1.34
PLOD1-209ENST00000491536 ABCC9O60706 1549 aa21.01■□□□□ 0.95
PLOD1-209ENST00000491536 CCDC180Q9P1Z9 1646 aa20.49■□□□□ 0.87
PLOD1-209ENST00000491536 DNAJC5BQ9UF47 199 aa20.3■□□□□ 0.84
PLOD1-209ENST00000491536 RB1CC1Q8TDY2 1594 aa19.69■□□□□ 0.74
PLOD1-209ENST00000491536 ZCCHC6Q5VYS8 1495 aaKnown RBP19.68■□□□□ 0.74
PLOD1-209ENST00000491536 PABPN1Q86U42 306 aaKnown RBP eCLIP19.53■□□□□ 0.72
PLOD1-209ENST00000491536 NACADO15069 1562 aa19.4■□□□□ 0.7
PLOD1-209ENST00000491536 DCAF8L2P0C7V8 631 aa19.37■□□□□ 0.69
PLOD1-209ENST00000491536 DCAF1Q9Y4B6 1507 aa19.36■□□□□ 0.69
PLOD1-209ENST00000491536 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
PLOD1-209ENST00000491536 SHROOM4Q9ULL8 1493 aa19.13■□□□□ 0.65
PLOD1-209ENST00000491536 BICRAQ9NZM4 1560 aa19.11■□□□□ 0.65
PLOD1-209ENST00000491536 DNAJC5Q9H3Z4 198 aa19.09■□□□□ 0.65
PLOD1-209ENST00000491536 MYO15BQ96JP2 1530 aa19.08■□□□□ 0.64
PLOD1-209ENST00000491536 CECR2Q9BXF3 1484 aa18.98■□□□□ 0.63
PLOD1-209ENST00000491536 CC2D2AQ9P2K1 1620 aa18.91■□□□□ 0.62
PLOD1-209ENST00000491536 SCRIBQ14160 1630 aa18.79■□□□□ 0.6
PLOD1-209ENST00000491536 EIF4G1Q04637 1599 aaKnown RBP18.71■□□□□ 0.59
PLOD1-209ENST00000491536 SUPT5HO00267 1087 aaKnown RBP18.46■□□□□ 0.55
PLOD1-209ENST00000491536 CUX2O14529 1486 aa18.33■□□□□ 0.52
PLOD1-209ENST00000491536 ERCC6Q03468 1493 aa18.2■□□□□ 0.5
PLOD1-209ENST00000491536 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
PLOD1-209ENST00000491536 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
PLOD1-209ENST00000491536 MROH2BQ7Z745 1585 aa18.07■□□□□ 0.48
PLOD1-209ENST00000491536 TRIM41Q8WV44 630 aa18.04■□□□□ 0.48
PLOD1-209ENST00000491536 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
PLOD1-209ENST00000491536 WIZO95785 1651 aa18.01■□□□□ 0.47
PLOD1-209ENST00000491536 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
PLOD1-209ENST00000491536 NESP48681 1621 aa17.86■□□□□ 0.45
PLOD1-209ENST00000491536 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
PLOD1-209ENST00000491536 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
PLOD1-209ENST00000491536 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
PLOD1-209ENST00000491536 THOC2Q8NI27 1593 aaKnown RBP17.73■□□□□ 0.43
PLOD1-209ENST00000491536 CHIC1Q5VXU3 224 aa17.71■□□□□ 0.43
PLOD1-209ENST00000491536 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
PLOD1-209ENST00000491536 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
PLOD1-209ENST00000491536 LAMC3Q9Y6N6 1575 aa17.61■□□□□ 0.41
PLOD1-209ENST00000491536 BAZ1BQ9UIG0 1483 aaKnown RBP17.6■□□□□ 0.41
PLOD1-209ENST00000491536 PDS5BQ9NTI5 1447 aa17.58■□□□□ 0.41
PLOD1-209ENST00000491536 KIF21AQ7Z4S6 1674 aa17.57■□□□□ 0.4
PLOD1-209ENST00000491536 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
PLOD1-209ENST00000491536 OSCARQ8IYS5 282 aa17.5■□□□□ 0.39
PLOD1-209ENST00000491536 MRC2Q9UBG0 1479 aa17.43■□□□□ 0.38
PLOD1-209ENST00000491536 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
PLOD1-209ENST00000491536 WDR62O43379 1518 aa17.37■□□□□ 0.37
PLOD1-209ENST00000491536 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
PLOD1-209ENST00000491536 PRDM2Q13029 1718 aa17.27■□□□□ 0.36
PLOD1-209ENST00000491536 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
PLOD1-209ENST00000491536 RIMBP3CA6NJZ7 1639 aa17.22■□□□□ 0.35
PLOD1-209ENST00000491536 RIMBP3BA6NNM3 1639 aa17.22■□□□□ 0.35
PLOD1-209ENST00000491536 RIMBP3Q9UFD9 1639 aa17.22■□□□□ 0.35
PLOD1-209ENST00000491536 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
PLOD1-209ENST00000491536 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
PLOD1-209ENST00000491536 CYB5RLQ6IPT4 315 aa17.15■□□□□ 0.34
PLOD1-209ENST00000491536 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
PLOD1-209ENST00000491536 WRNQ14191 1432 aaPredicted RBP eCLIP17.12■□□□□ 0.33
PLOD1-209ENST00000491536 ARHGEF11O15085 1522 aa17.11■□□□□ 0.33
PLOD1-209ENST00000491536 SYNJ1O43426 1573 aa17.08■□□□□ 0.32
PLOD1-209ENST00000491536 CFTRP13569 1480 aa17.08■□□□□ 0.32
PLOD1-209ENST00000491536 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
PLOD1-209ENST00000491536 BIVM-ERCC5R4GMW8 1640 aa17.05■□□□□ 0.32
PLOD1-209ENST00000491536 FAM9AQ8IZU1 332 aaPredicted RBP17.04■□□□□ 0.32
PLOD1-209ENST00000491536 LOC105371045A0A1W2PR82 267 aa17.02■□□□□ 0.32
PLOD1-209ENST00000491536 TOP2BQ02880 1626 aa17.02■□□□□ 0.31
PLOD1-209ENST00000491536 EEA1Q15075 1411 aa16.97■□□□□ 0.31
PLOD1-209ENST00000491536 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.31
PLOD1-209ENST00000491536 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
PLOD1-209ENST00000491536 SOGA1O94964 1423 aa16.9■□□□□ 0.3
PLOD1-209ENST00000491536 CUX1P39880 1505 aa16.9■□□□□ 0.3
PLOD1-209ENST00000491536 ARAP1Q96P48 1450 aa16.89■□□□□ 0.29
PLOD1-209ENST00000491536 FBLN2P98095 1184 aa16.86■□□□□ 0.29
PLOD1-209ENST00000491536 RUSC2Q8N2Y8 1516 aa16.85■□□□□ 0.29
PLOD1-209ENST00000491536 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
PLOD1-209ENST00000491536 CHD1O14646 1710 aa16.79■□□□□ 0.28
PLOD1-209ENST00000491536 KIF21BO75037 1637 aa16.79■□□□□ 0.28
PLOD1-209ENST00000491536 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
PLOD1-209ENST00000491536 EIF4G3O43432 1585 aaKnown RBP16.78■□□□□ 0.28
PLOD1-209ENST00000491536 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.28
PLOD1-209ENST00000491536 TOPBP1Q92547 1522 aa16.77■□□□□ 0.28
PLOD1-209ENST00000491536 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.281e-6■■■■□ 19.9
PLOD1-209ENST00000491536 GOLGA3Q08378 1498 aa16.74■□□□□ 0.27
PLOD1-209ENST00000491536 FGD5Q6ZNL6 1462 aa16.72■□□□□ 0.27
PLOD1-209ENST00000491536 KIF27Q86VH2 1401 aa16.69■□□□□ 0.26
PLOD1-209ENST00000491536 TNIKQ9UKE5 1360 aa16.67■□□□□ 0.26
PLOD1-209ENST00000491536 TARBP1Q13395 1621 aaKnown RBP16.65■□□□□ 0.26
PLOD1-209ENST00000491536 UBTFP17480 764 aaKnown RBP16.63■□□□□ 0.25
PLOD1-209ENST00000491536 ERICH3Q5RHP9 1530 aa16.63■□□□□ 0.25
PLOD1-209ENST00000491536 WDR97A6NE52 1622 aa16.61■□□□□ 0.25
PLOD1-209ENST00000491536 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
PLOD1-209ENST00000491536 TDRD9Q8NDG6 1382 aaKnown RBP16.59■□□□□ 0.25
PLOD1-209ENST00000491536 POLA1P09884 1462 aaPredicted RBP16.59■□□□□ 0.25
PLOD1-209ENST00000491536 CEP162Q5TB80 1403 aa16.58■□□□□ 0.24
PLOD1-209ENST00000491536 CLASP1Q7Z460 1538 aa16.57■□□□□ 0.24
PLOD1-209ENST00000491536 RAPGEF2Q9Y4G8 1499 aa16.57■□□□□ 0.24
PLOD1-209ENST00000491536 PRXQ9BXM0 1461 aa16.56■□□□□ 0.24
PLOD1-209ENST00000491536 ABCA10Q8WWZ4 1543 aa16.55■□□□□ 0.24
PLOD1-209ENST00000491536 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
PLOD1-209ENST00000491536 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
PLOD1-209ENST00000491536 GAPVD1Q14C86 1478 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms