RNA–Protein interactions for RNA: ENST00000477371.5

MRPL38-208, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 2

Gene MRPL38, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-208ENST00000477371 NISCHQ9Y2I1 1504 aa24.61■■□□□ 1.53
MRPL38-208ENST00000477371 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
MRPL38-208ENST00000477371 ABCC9O60706 1549 aa21.33■■□□□ 1
MRPL38-208ENST00000477371 DCAF8L2P0C7V8 631 aa20.6■□□□□ 0.89
MRPL38-208ENST00000477371 ZCCHC6Q5VYS8 1495 aaKnown RBP20.52■□□□□ 0.88
MRPL38-208ENST00000477371 RB1CC1Q8TDY2 1594 aa20.47■□□□□ 0.87
MRPL38-208ENST00000477371 NACADO15069 1562 aa20.46■□□□□ 0.87
MRPL38-208ENST00000477371 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
MRPL38-208ENST00000477371 DCAF1Q9Y4B6 1507 aa20.3■□□□□ 0.84
MRPL38-208ENST00000477371 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.81
MRPL38-208ENST00000477371 SCRIBQ14160 1630 aa19.99■□□□□ 0.79
MRPL38-208ENST00000477371 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.79
MRPL38-208ENST00000477371 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
MRPL38-208ENST00000477371 SHROOM4Q9ULL8 1493 aa19.61■□□□□ 0.73
MRPL38-208ENST00000477371 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
MRPL38-208ENST00000477371 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
MRPL38-208ENST00000477371 CC2D2AQ9P2K1 1620 aa19.27■□□□□ 0.68
MRPL38-208ENST00000477371 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
MRPL38-208ENST00000477371 SMARCA4P51532 1647 aa19.09■□□□□ 0.65
MRPL38-208ENST00000477371 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
MRPL38-208ENST00000477371 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
MRPL38-208ENST00000477371 ATAD2BQ9ULI0 1458 aa18.96■□□□□ 0.63
MRPL38-208ENST00000477371 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
MRPL38-208ENST00000477371 SMARCA2P51531 1590 aa18.89■□□□□ 0.62
MRPL38-208ENST00000477371 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
MRPL38-208ENST00000477371 WIZO95785 1651 aa18.83■□□□□ 0.61
MRPL38-208ENST00000477371 RSF1Q96T23 1441 aaPredicted RBP18.81■□□□□ 0.6
MRPL38-208ENST00000477371 HMGXB3Q12766 1538 aa18.8■□□□□ 0.6
MRPL38-208ENST00000477371 BAZ1BQ9UIG0 1483 aaKnown RBP18.8■□□□□ 0.6
MRPL38-208ENST00000477371 TOP2AP11388 1531 aaKnown RBP18.58■□□□□ 0.56
MRPL38-208ENST00000477371 NESP48681 1621 aa18.5■□□□□ 0.55
MRPL38-208ENST00000477371 SUPT5HO00267 1087 aaKnown RBP18.47■□□□□ 0.55
MRPL38-208ENST00000477371 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.54
MRPL38-208ENST00000477371 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
MRPL38-208ENST00000477371 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
MRPL38-208ENST00000477371 ERCC6Q03468 1493 aa18.33■□□□□ 0.52
MRPL38-208ENST00000477371 CFTRP13569 1480 aa18.27■□□□□ 0.52
MRPL38-208ENST00000477371 KIF21AQ7Z4S6 1674 aa18.27■□□□□ 0.52
MRPL38-208ENST00000477371 PDS5BQ9NTI5 1447 aa18.24■□□□□ 0.51
MRPL38-208ENST00000477371 FANCD2Q9BXW9 1451 aa18.17■□□□□ 0.5
MRPL38-208ENST00000477371 THOC2Q8NI27 1593 aaKnown RBP18.16■□□□□ 0.5
MRPL38-208ENST00000477371 PRDM2Q13029 1718 aa18.14■□□□□ 0.49
MRPL38-208ENST00000477371 CEP164Q9UPV0 1460 aa18.13■□□□□ 0.49
MRPL38-208ENST00000477371 MRC2Q9UBG0 1479 aa18.08■□□□□ 0.49
MRPL38-208ENST00000477371 CUX2O14529 1486 aa18.05■□□□□ 0.48
MRPL38-208ENST00000477371 WDR62O43379 1518 aa18.02■□□□□ 0.47
MRPL38-208ENST00000477371 URB2Q14146 1524 aaKnown RBP18.01■□□□□ 0.47
MRPL38-208ENST00000477371 TOPBP1Q92547 1522 aa17.9■□□□□ 0.46
MRPL38-208ENST00000477371 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
MRPL38-208ENST00000477371 ABCC8Q09428 1581 aa17.83■□□□□ 0.44
MRPL38-208ENST00000477371 CUX1P39880 1505 aa17.82■□□□□ 0.44
MRPL38-208ENST00000477371 POLA1P09884 1462 aaPredicted RBP17.75■□□□□ 0.43
MRPL38-208ENST00000477371 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
MRPL38-208ENST00000477371 IFT140Q96RY7 1462 aa17.72■□□□□ 0.43
MRPL38-208ENST00000477371 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
MRPL38-208ENST00000477371 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
MRPL38-208ENST00000477371 SYNJ1O43426 1573 aa17.71■□□□□ 0.43
MRPL38-208ENST00000477371 ZNF608Q9ULD9 1512 aaPredicted RBP17.71■□□□□ 0.43
MRPL38-208ENST00000477371 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
MRPL38-208ENST00000477371 SOGA1O94964 1423 aa17.68■□□□□ 0.42
MRPL38-208ENST00000477371 TOP2BQ02880 1626 aa17.66■□□□□ 0.42
MRPL38-208ENST00000477371 BIVM-ERCC5R4GMW8 1640 aa17.66■□□□□ 0.42
MRPL38-208ENST00000477371 AQRO60306 1485 aaKnown RBP eCLIP17.62■□□□□ 0.412e-6■■■■□ 19.9
MRPL38-208ENST00000477371 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
MRPL38-208ENST00000477371 TDRD9Q8NDG6 1382 aaKnown RBP17.6■□□□□ 0.41
MRPL38-208ENST00000477371 WDR97A6NE52 1622 aa17.58■□□□□ 0.4
MRPL38-208ENST00000477371 ABCA10Q8WWZ4 1543 aa17.53■□□□□ 0.4
MRPL38-208ENST00000477371 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
MRPL38-208ENST00000477371 GAPVD1Q14C86 1478 aa17.47■□□□□ 0.39
MRPL38-208ENST00000477371 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
MRPL38-208ENST00000477371 GRIN2BQ13224 1484 aa17.44■□□□□ 0.38
MRPL38-208ENST00000477371 SNAPC4Q5SXM2 1469 aa17.44■□□□□ 0.38
MRPL38-208ENST00000477371 DNAJC5Q9H3Z4 198 aa17.42■□□□□ 0.38
MRPL38-208ENST00000477371 CHD1O14646 1710 aa17.39■□□□□ 0.37
MRPL38-208ENST00000477371 TRIM41Q8WV44 630 aa17.39■□□□□ 0.37
MRPL38-208ENST00000477371 FBLN2P98095 1184 aa17.38■□□□□ 0.37
MRPL38-208ENST00000477371 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
MRPL38-208ENST00000477371 OSCARQ8IYS5 282 aa17.35■□□□□ 0.37
MRPL38-208ENST00000477371 KIF27Q86VH2 1401 aa17.32■□□□□ 0.36
MRPL38-208ENST00000477371 SYNJ2O15056 1496 aa17.31■□□□□ 0.36
MRPL38-208ENST00000477371 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
MRPL38-208ENST00000477371 ADAMTS12P58397 1594 aa17.31■□□□□ 0.36
MRPL38-208ENST00000477371 ERICH3Q5RHP9 1530 aa17.31■□□□□ 0.36
MRPL38-208ENST00000477371 RUSC2Q8N2Y8 1516 aa17.3■□□□□ 0.36
MRPL38-208ENST00000477371 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
MRPL38-208ENST00000477371 IGF1RP08069 1367 aa17.27■□□□□ 0.35
MRPL38-208ENST00000477371 FHAD1B1AJZ9 1412 aa17.25■□□□□ 0.35
MRPL38-208ENST00000477371 GRIN2AQ12879 1464 aa17.23■□□□□ 0.35
MRPL38-208ENST00000477371 CUL7Q14999 1698 aa17.18■□□□□ 0.34
MRPL38-208ENST00000477371 CLASP1Q7Z460 1538 aa17.17■□□□□ 0.34
MRPL38-208ENST00000477371 CEP170Q5SW79 1584 aa17.17■□□□□ 0.34
MRPL38-208ENST00000477371 CARMIL1Q5VZK9 1371 aa17.16■□□□□ 0.34
MRPL38-208ENST00000477371 NUP160Q12769 1436 aa17.14■□□□□ 0.33
MRPL38-208ENST00000477371 FAM9AQ8IZU1 332 aaPredicted RBP17.11■□□□□ 0.33
MRPL38-208ENST00000477371 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
MRPL38-208ENST00000477371 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
MRPL38-208ENST00000477371 RIMBP3Q9UFD9 1639 aa17.1■□□□□ 0.33
MRPL38-208ENST00000477371 ARHGEF11O15085 1522 aa17.09■□□□□ 0.33
MRPL38-208ENST00000477371 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
MRPL38-208ENST00000477371 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms