RNA–Protein interactions for RNA: ENST00000412343.5

UQCRC1-202, Transcript of ubiquinol-cytochrome c reductase core protein 1, humanhuman

TSL 3

Gene UQCRC1, Length 778 nt, Biotype nonsense mediated decay, Subcellular localisation Mitochondria, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UQCRC1-202ENST00000412343 NISCHQ9Y2I1 1504 aa53.22■■■■■ 6.11
UQCRC1-202ENST00000412343 CCDC180Q9P1Z9 1646 aa47.67■■■■■ 5.22
UQCRC1-202ENST00000412343 ABCC9O60706 1549 aa47.14■■■■■ 5.14
UQCRC1-202ENST00000412343 RB1CC1Q8TDY2 1594 aa45.19■■■■■ 4.82
UQCRC1-202ENST00000412343 NACADO15069 1562 aa44.98■■■■■ 4.79
UQCRC1-202ENST00000412343 DCAF8L2P0C7V8 631 aa44.73■■■■■ 4.75
UQCRC1-202ENST00000412343 MYO15BQ96JP2 1530 aa44.53■■■■■ 4.72
UQCRC1-202ENST00000412343 ZCCHC6Q5VYS8 1495 aaKnown RBP44.19■■■■■ 4.66
UQCRC1-202ENST00000412343 DCAF1Q9Y4B6 1507 aa44.08■■■■■ 4.65
UQCRC1-202ENST00000412343 UNC13AQ9UPW8 1703 aa44.04■■■■■ 4.64
UQCRC1-202ENST00000412343 PABPN1Q86U42 306 aaKnown RBP eCLIP43.9■■■■■ 4.62
UQCRC1-202ENST00000412343 DNAJC5BQ9UF47 199 aa43.73■■■■■ 4.59
UQCRC1-202ENST00000412343 BICRAQ9NZM4 1560 aa43.7■■■■■ 4.59
UQCRC1-202ENST00000412343 SHROOM4Q9ULL8 1493 aa43.39■■■■■ 4.54
UQCRC1-202ENST00000412343 SCRIBQ14160 1630 aa43.34■■■■■ 4.53
UQCRC1-202ENST00000412343 EIF4G1Q04637 1599 aaKnown RBP42.66■■■■■ 4.42
UQCRC1-202ENST00000412343 CC2D2AQ9P2K1 1620 aa42.64■■■■■ 4.42
UQCRC1-202ENST00000412343 CECR2Q9BXF3 1484 aa42.48■■■■■ 4.39
UQCRC1-202ENST00000412343 NCAPD3P42695 1498 aa41.47■■■■■ 4.23
UQCRC1-202ENST00000412343 SMARCA4P51532 1647 aa41.43■■■■■ 4.22
UQCRC1-202ENST00000412343 SMARCA2P51531 1590 aa41.37■■■■■ 4.21
UQCRC1-202ENST00000412343 ATAD2BQ9ULI0 1458 aa41.36■■■■■ 4.21
UQCRC1-202ENST00000412343 BAZ1AQ9NRL2 1556 aaPredicted RBP41.36■■■■■ 4.21
UQCRC1-202ENST00000412343 HMGXB3Q12766 1538 aa41.23■■■■■ 4.19
UQCRC1-202ENST00000412343 PEG3Q9GZU2 1588 aa41.07■■■■■ 4.16
UQCRC1-202ENST00000412343 BAZ1BQ9UIG0 1483 aaKnown RBP41.03■■■■■ 4.16
UQCRC1-202ENST00000412343 MROH2BQ7Z745 1585 aa40.95■■■■■ 4.15
UQCRC1-202ENST00000412343 ERCC6Q03468 1493 aa40.78■■■■■ 4.12
UQCRC1-202ENST00000412343 CUX2O14529 1486 aa40.59■■■■■ 4.09
UQCRC1-202ENST00000412343 NESP48681 1621 aa40.56■■■■■ 4.08
UQCRC1-202ENST00000412343 LAMC3Q9Y6N6 1575 aa40.52■■■■■ 4.08
UQCRC1-202ENST00000412343 WIZO95785 1651 aa40.48■■■■■ 4.07
UQCRC1-202ENST00000412343 PDS5BQ9NTI5 1447 aa40.29■■■■■ 4.04
UQCRC1-202ENST00000412343 RSF1Q96T23 1441 aaPredicted RBP40.27■■■■■ 4.04
UQCRC1-202ENST00000412343 CADPSQ9ULU8 1353 aa40.23■■■■■ 4.03
UQCRC1-202ENST00000412343 THOC2Q8NI27 1593 aaKnown RBP40.14■■■■■ 4.02
UQCRC1-202ENST00000412343 KIF21AQ7Z4S6 1674 aa40.11■■■■■ 4.01
UQCRC1-202ENST00000412343 TOP2AP11388 1531 aaKnown RBP40.08■■■■■ 4.01
UQCRC1-202ENST00000412343 DNAJC5Q9H3Z4 198 aa40.03■■■■■ 4
UQCRC1-202ENST00000412343 MRC2Q9UBG0 1479 aa39.86■■■■□ 3.97
UQCRC1-202ENST00000412343 CFTRP13569 1480 aa39.85■■■■□ 3.97
UQCRC1-202ENST00000412343 CEP164Q9UPV0 1460 aa39.8■■■■□ 3.96
UQCRC1-202ENST00000412343 FANCD2Q9BXW9 1451 aa39.75■■■■□ 3.95
UQCRC1-202ENST00000412343 WDR62O43379 1518 aa39.73■■■■□ 3.95
UQCRC1-202ENST00000412343 CCDC88BA6NC98 1476 aa39.56■■■■□ 3.92
UQCRC1-202ENST00000412343 PRDM2Q13029 1718 aa39.54■■■■□ 3.92
UQCRC1-202ENST00000412343 URB2Q14146 1524 aaKnown RBP39.34■■■■□ 3.89
UQCRC1-202ENST00000412343 ABCC8Q09428 1581 aa39.12■■■■□ 3.85
UQCRC1-202ENST00000412343 TOPBP1Q92547 1522 aa39.04■■■■□ 3.84
UQCRC1-202ENST00000412343 IFT140Q96RY7 1462 aa39■■■■□ 3.83
UQCRC1-202ENST00000412343 DNMBPQ6XZF7 1577 aa38.96■■■■□ 3.83
UQCRC1-202ENST00000412343 OSCARQ8IYS5 282 aa38.8■■■■□ 3.8
UQCRC1-202ENST00000412343 SUPT5HO00267 1087 aaKnown RBP38.78■■■■□ 3.8
UQCRC1-202ENST00000412343 ZNF608Q9ULD9 1512 aaPredicted RBP38.76■■■■□ 3.8
UQCRC1-202ENST00000412343 POLA1P09884 1462 aaPredicted RBP38.65■■■■□ 3.78
UQCRC1-202ENST00000412343 EIF4G3O43432 1585 aaKnown RBP38.64■■■■□ 3.78
UQCRC1-202ENST00000412343 TARBP1Q13395 1621 aaKnown RBP38.63■■■■□ 3.78
UQCRC1-202ENST00000412343 SOGA1O94964 1423 aa38.52■■■■□ 3.76
UQCRC1-202ENST00000412343 AQRO60306 1485 aaKnown RBP eCLIP38.48■■■■□ 3.758e-8■■■■■ 38.6
UQCRC1-202ENST00000412343 FGD5Q6ZNL6 1462 aa38.47■■■■□ 3.75
UQCRC1-202ENST00000412343 CUX1P39880 1505 aa38.46■■■■□ 3.75
UQCRC1-202ENST00000412343 RAD54L2Q9Y4B4 1467 aa38.44■■■■□ 3.74
UQCRC1-202ENST00000412343 WDR97A6NE52 1622 aa38.44■■■■□ 3.74
UQCRC1-202ENST00000412343 TRIM41Q8WV44 630 aa38.41■■■■□ 3.74
UQCRC1-202ENST00000412343 TDRD9Q8NDG6 1382 aaKnown RBP38.32■■■■□ 3.73
UQCRC1-202ENST00000412343 CHD1O14646 1710 aa38.26■■■■□ 3.72
UQCRC1-202ENST00000412343 FBLN2P98095 1184 aa38.22■■■■□ 3.71
UQCRC1-202ENST00000412343 RIMBP3CA6NJZ7 1639 aa38.16■■■■□ 3.7
UQCRC1-202ENST00000412343 RIMBP3BA6NNM3 1639 aa38.16■■■■□ 3.7
UQCRC1-202ENST00000412343 RIMBP3Q9UFD9 1639 aa38.16■■■■□ 3.7
UQCRC1-202ENST00000412343 GRIN2BQ13224 1484 aa38.16■■■■□ 3.7
UQCRC1-202ENST00000412343 MAGI1Q96QZ7 1491 aaPredicted RBP38.15■■■■□ 3.7
UQCRC1-202ENST00000412343 SNAPC4Q5SXM2 1469 aa38.15■■■■□ 3.7
UQCRC1-202ENST00000412343 ARHGEF11O15085 1522 aa38.1■■■■□ 3.69
UQCRC1-202ENST00000412343 ABCA10Q8WWZ4 1543 aa38.1■■■■□ 3.69
UQCRC1-202ENST00000412343 WRNQ14191 1432 aaPredicted RBP eCLIP38.06■■■■□ 3.68
UQCRC1-202ENST00000412343 CHMP7Q8WUX9 453 aaPredicted RBP38.06■■■■□ 3.68
UQCRC1-202ENST00000412343 GAPVD1Q14C86 1478 aa38.06■■■■□ 3.68
UQCRC1-202ENST00000412343 TOP2BQ02880 1626 aa38.03■■■■□ 3.68
UQCRC1-202ENST00000412343 BIVM-ERCC5R4GMW8 1640 aa38.02■■■■□ 3.68
UQCRC1-202ENST00000412343 PBRM1Q86U86 1689 aa38.01■■■■□ 3.67
UQCRC1-202ENST00000412343 SYNJ2O15056 1496 aa37.99■■■■□ 3.67
UQCRC1-202ENST00000412343 ABCA5Q8WWZ7 1642 aa37.98■■■■□ 3.67
UQCRC1-202ENST00000412343 SYNJ1O43426 1573 aa37.95■■■■□ 3.67
UQCRC1-202ENST00000412343 CLASP1Q7Z460 1538 aa37.84■■■■□ 3.65
UQCRC1-202ENST00000412343 CYB5RLQ6IPT4 315 aa37.79■■■■□ 3.64
UQCRC1-202ENST00000412343 ARAP1Q96P48 1450 aa37.71■■■■□ 3.63
UQCRC1-202ENST00000412343 ERICH3Q5RHP9 1530 aa37.66■■■■□ 3.62
UQCRC1-202ENST00000412343 ADAMTS12P58397 1594 aa37.66■■■■□ 3.62
UQCRC1-202ENST00000412343 GRIN2AQ12879 1464 aa37.64■■■■□ 3.62
UQCRC1-202ENST00000412343 FHAD1B1AJZ9 1412 aa37.62■■■■□ 3.61
UQCRC1-202ENST00000412343 NUP160Q12769 1436 aa37.5■■■■□ 3.59
UQCRC1-202ENST00000412343 CEP170Q5SW79 1584 aa37.43■■■■□ 3.58
UQCRC1-202ENST00000412343 KIF27Q86VH2 1401 aa37.35■■■■□ 3.57
UQCRC1-202ENST00000412343 TRHP20396 242 aaPredicted RBP37.29■■■■□ 3.56
UQCRC1-202ENST00000412343 SHROOM2Q13796 1616 aa37.28■■■■□ 3.56
UQCRC1-202ENST00000412343 CUL7Q14999 1698 aa37.21■■■■□ 3.55
UQCRC1-202ENST00000412343 IGF1RP08069 1367 aa37.19■■■■□ 3.54
UQCRC1-202ENST00000412343 ERCC6L2Q5T890 1561 aa37.17■■■■□ 3.54
UQCRC1-202ENST00000412343 JPH4Q96JJ6 628 aa37.13■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms