RNA–Protein interactions for RNA: ENST00000616568.4

PHF19-214, Transcript of PHD finger protein 19, humanhuman

TSL 1 (best) BASIC

Gene PHF19, Length 4,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF19-214ENST00000616568 NISCHQ9Y2I1 1504 aa19.07■□□□□ 0.64
PHF19-214ENST00000616568 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
PHF19-214ENST00000616568 SHROOM4Q9ULL8 1493 aa17.25■□□□□ 0.35
PHF19-214ENST00000616568 SUPT5HO00267 1087 aaKnown RBP17.11■□□□□ 0.33
PHF19-214ENST00000616568 ABCC9O60706 1549 aa16.19■□□□□ 0.18
PHF19-214ENST00000616568 EHMT2Q96KQ7 1210 aa16.18■□□□□ 0.18
PHF19-214ENST00000616568 FAM9AQ8IZU1 332 aaPredicted RBP16.01■□□□□ 0.15
PHF19-214ENST00000616568 CCDC180Q9P1Z9 1646 aa15.89■□□□□ 0.13
PHF19-214ENST00000616568 ZCCHC6Q5VYS8 1495 aaKnown RBP15.87■□□□□ 0.13
PHF19-214ENST00000616568 TRIM41Q8WV44 630 aa15.87■□□□□ 0.13
PHF19-214ENST00000616568 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
PHF19-214ENST00000616568 CHIC1Q5VXU3 224 aa15.68■□□□□ 0.1
PHF19-214ENST00000616568 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
PHF19-214ENST00000616568 RANGAP1P46060 587 aaPredicted RBP15.55■□□□□ 0.08
PHF19-214ENST00000616568 TTBK1Q5TCY1 1321 aaPredicted RBP15.53■□□□□ 0.08
PHF19-214ENST00000616568 PCGF6Q9BYE7 350 aa15.52■□□□□ 0.07
PHF19-214ENST00000616568 LOC105371045A0A1W2PR82 267 aa15.49■□□□□ 0.07
PHF19-214ENST00000616568 UBTFP17480 764 aaKnown RBP15.47■□□□□ 0.07
PHF19-214ENST00000616568 APLP2Q06481 763 aa15.47■□□□□ 0.07
PHF19-214ENST00000616568 PPARGC1BQ86YN6 1023 aaKnown RBP15.3■□□□□ 0.04
PHF19-214ENST00000616568 RB1CC1Q8TDY2 1594 aa15.26■□□□□ 0.03
PHF19-214ENST00000616568 DCAF1Q9Y4B6 1507 aa15.25■□□□□ 0.03
PHF19-214ENST00000616568 NACADO15069 1562 aa15.25■□□□□ 0.03
PHF19-214ENST00000616568 ATP1B4Q9UN42 357 aaPredicted RBP15.22■□□□□ 0.03
PHF19-214ENST00000616568 RSF1Q96T23 1441 aaPredicted RBP15.14■□□□□ 0.01
PHF19-214ENST00000616568 TRIM26Q12899 539 aaPredicted RBP15.04■□□□□ -0
PHF19-214ENST00000616568 CECR2Q9BXF3 1484 aa15.03■□□□□ -0
PHF19-214ENST00000616568 CCER1Q8TC90 406 aaPredicted RBP15.02□□□□□ -0.01
PHF19-214ENST00000616568 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
PHF19-214ENST00000616568 MYO15BQ96JP2 1530 aa14.89□□□□□ -0.03
PHF19-214ENST00000616568 ZEB1P37275 1124 aaPredicted RBP14.86□□□□□ -0.03
PHF19-214ENST00000616568 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
PHF19-214ENST00000616568 ITGAEP38570 1179 aa14.83□□□□□ -0.04
PHF19-214ENST00000616568 MROH2BQ7Z745 1585 aa14.83□□□□□ -0.04
PHF19-214ENST00000616568 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
PHF19-214ENST00000616568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.78□□□□□ -0.04
PHF19-214ENST00000616568 HRCP23327 699 aa14.77□□□□□ -0.05
PHF19-214ENST00000616568 BAZ1BQ9UIG0 1483 aaKnown RBP14.76□□□□□ -0.05
PHF19-214ENST00000616568 FBLN2P98095 1184 aa14.67□□□□□ -0.06
PHF19-214ENST00000616568 P3H3Q8IVL6 736 aa14.67□□□□□ -0.06
PHF19-214ENST00000616568 WRNQ14191 1432 aaPredicted RBP eCLIP14.62□□□□□ -0.07
PHF19-214ENST00000616568 WIZO95785 1651 aa14.61□□□□□ -0.07
PHF19-214ENST00000616568 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
PHF19-214ENST00000616568 FAM50AQ14320 339 aaKnown RBP14.56□□□□□ -0.08
PHF19-214ENST00000616568 PELP1Q8IZL8 1130 aaKnown RBP14.54□□□□□ -0.08
PHF19-214ENST00000616568 ARID3CA6NKF2 412 aa14.52□□□□□ -0.09
PHF19-214ENST00000616568 SMARCA2P51531 1590 aa14.47□□□□□ -0.09
PHF19-214ENST00000616568 SMARCA4P51532 1647 aa14.47□□□□□ -0.09
PHF19-214ENST00000616568 ATAD2BQ9ULI0 1458 aa14.46□□□□□ -0.09
PHF19-214ENST00000616568 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
PHF19-214ENST00000616568 ABCC8Q09428 1581 aa14.45□□□□□ -0.1
PHF19-214ENST00000616568 SOGA1O94964 1423 aa14.45□□□□□ -0.1
PHF19-214ENST00000616568 EEA1Q15075 1411 aa14.44□□□□□ -0.1
PHF19-214ENST00000616568 MYT1LQ9UL68 1186 aa14.42□□□□□ -0.1
PHF19-214ENST00000616568 CLIP1P30622 1438 aa14.4□□□□□ -0.1
PHF19-214ENST00000616568 CEP162Q5TB80 1403 aa14.39□□□□□ -0.11
PHF19-214ENST00000616568 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
PHF19-214ENST00000616568 KIF27Q86VH2 1401 aa14.37□□□□□ -0.11
PHF19-214ENST00000616568 YTHDC1Q96MU7 727 aaKnown RBP14.34□□□□□ -0.11
PHF19-214ENST00000616568 TNIKQ9UKE5 1360 aa14.33□□□□□ -0.12
PHF19-214ENST00000616568 TRIM52Q96A61 297 aa14.31□□□□□ -0.12
PHF19-214ENST00000616568 CENPBP07199 599 aaPredicted RBP14.3□□□□□ -0.12
PHF19-214ENST00000616568 CEP164Q9UPV0 1460 aa14.3□□□□□ -0.12
PHF19-214ENST00000616568 NEUROD1Q13562 356 aa14.3□□□□□ -0.12
PHF19-214ENST00000616568 CHMP7Q8WUX9 453 aaPredicted RBP14.29□□□□□ -0.12
PHF19-214ENST00000616568 CADPSQ9ULU8 1353 aa14.27□□□□□ -0.13
PHF19-214ENST00000616568 CUX2O14529 1486 aa14.27□□□□□ -0.13
PHF19-214ENST00000616568 ZNF777Q9ULD5 760 aaPredicted RBP14.23□□□□□ -0.13
PHF19-214ENST00000616568 CDK11AQ9UQ88 783 aaPredicted RBP14.22□□□□□ -0.13
PHF19-214ENST00000616568 ERCC6Q03468 1493 aa14.21□□□□□ -0.13
PHF19-214ENST00000616568 CARMIL1Q5VZK9 1371 aa14.2□□□□□ -0.14
PHF19-214ENST00000616568 POLR3GLQ9BT43 218 aa14.2□□□□□ -0.14
PHF19-214ENST00000616568 EIF4G1Q04637 1599 aaKnown RBP14.19□□□□□ -0.14
PHF19-214ENST00000616568 DIEXFQ68CQ4 756 aaKnown RBP14.19□□□□□ -0.14
PHF19-214ENST00000616568 RUSC2Q8N2Y8 1516 aa14.18□□□□□ -0.14
PHF19-214ENST00000616568 NCAPD3P42695 1498 aa14.17□□□□□ -0.14
PHF19-214ENST00000616568 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
PHF19-214ENST00000616568 TDRD9Q8NDG6 1382 aaKnown RBP14.16□□□□□ -0.14
PHF19-214ENST00000616568 BICRAQ9NZM4 1560 aa14.16□□□□□ -0.14
PHF19-214ENST00000616568 MTUS2Q5JR59 1369 aa14.15□□□□□ -0.14
PHF19-214ENST00000616568 CNGB1Q14028 1251 aaPredicted RBP14.13□□□□□ -0.15
PHF19-214ENST00000616568 MYT1Q01538 1121 aa14.12□□□□□ -0.15
PHF19-214ENST00000616568 CHIC2Q9UKJ5 165 aa14.12□□□□□ -0.15
PHF19-214ENST00000616568 FANCD2Q9BXW9 1451 aa14.07□□□□□ -0.16
PHF19-214ENST00000616568 ZNF326Q5BKZ1 582 aaKnown RBP14.07□□□□□ -0.16
PHF19-214ENST00000616568 RAPGEF2Q9Y4G8 1499 aa14.05□□□□□ -0.16
PHF19-214ENST00000616568 ZNF316A6NFI3 1004 aaPredicted RBP14.05□□□□□ -0.16
PHF19-214ENST00000616568 VPS8Q8N3P4 1428 aa14.01□□□□□ -0.17
PHF19-214ENST00000616568 KANK4Q5T7N3 995 aaPredicted RBP14□□□□□ -0.17
PHF19-214ENST00000616568 RRP7BPQ9NSQ0 103 aa13.97□□□□□ -0.17
PHF19-214ENST00000616568 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
PHF19-214ENST00000616568 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.17
PHF19-214ENST00000616568 PLEKHD1A6NEE1 506 aa13.96□□□□□ -0.17
PHF19-214ENST00000616568 KCNH8Q96L42 1107 aa13.96□□□□□ -0.17
PHF19-214ENST00000616568 UNC13AQ9UPW8 1703 aa13.95□□□□□ -0.18
PHF19-214ENST00000616568 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
PHF19-214ENST00000616568 CFTRP13569 1480 aa13.95□□□□□ -0.18
PHF19-214ENST00000616568 FHAD1B1AJZ9 1412 aa13.95□□□□□ -0.18
PHF19-214ENST00000616568 FGD5Q6ZNL6 1462 aa13.94□□□□□ -0.18
PHF19-214ENST00000616568 NESP48681 1621 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms