RNA–Protein interactions for RNA: ENST00000442760.2

TPT1-205, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 2

Gene TPT1, Length 902 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-205ENST00000442760 NISCHQ9Y2I1 1504 aa50.59■■■■■ 5.69
TPT1-205ENST00000442760 CCDC180Q9P1Z9 1646 aa45.44■■■■■ 4.86
TPT1-205ENST00000442760 ABCC9O60706 1549 aa45.42■■■■■ 4.86
TPT1-205ENST00000442760 RB1CC1Q8TDY2 1594 aa43.2■■■■■ 4.51
TPT1-205ENST00000442760 NACADO15069 1562 aa42.9■■■■■ 4.46
TPT1-205ENST00000442760 DCAF8L2P0C7V8 631 aa42.56■■■■■ 4.4
TPT1-205ENST00000442760 DNAJC5BQ9UF47 199 aa42.56■■■■■ 4.4
TPT1-205ENST00000442760 UNC13AQ9UPW8 1703 aa42.32■■■■■ 4.36
TPT1-205ENST00000442760 MYO15BQ96JP2 1530 aa42.3■■■■■ 4.36
TPT1-205ENST00000442760 PABPN1Q86U42 306 aaKnown RBP eCLIP42.22■■■■■ 4.35
TPT1-205ENST00000442760 BICRAQ9NZM4 1560 aa42.02■■■■■ 4.32
TPT1-205ENST00000442760 ZCCHC6Q5VYS8 1495 aaKnown RBP41.98■■■■■ 4.31
TPT1-205ENST00000442760 DCAF1Q9Y4B6 1507 aa41.78■■■■■ 4.28
TPT1-205ENST00000442760 SCRIBQ14160 1630 aa41.43■■■■■ 4.22
TPT1-205ENST00000442760 SHROOM4Q9ULL8 1493 aa41.38■■■■■ 4.21
TPT1-205ENST00000442760 CC2D2AQ9P2K1 1620 aa41.04■■■■■ 4.16
TPT1-205ENST00000442760 EIF4G1Q04637 1599 aaKnown RBP40.96■■■■■ 4.15
TPT1-205ENST00000442760 CECR2Q9BXF3 1484 aa40.89■■■■■ 4.14
TPT1-205ENST00000442760 NCAPD3P42695 1498 aa39.59■■■■□ 3.93
TPT1-205ENST00000442760 SMARCA4P51532 1647 aa39.51■■■■□ 3.91
TPT1-205ENST00000442760 ATAD2BQ9ULI0 1458 aa39.49■■■■□ 3.91
TPT1-205ENST00000442760 SMARCA2P51531 1590 aa39.38■■■■□ 3.89
TPT1-205ENST00000442760 HMGXB3Q12766 1538 aa39.35■■■■□ 3.89
TPT1-205ENST00000442760 BAZ1AQ9NRL2 1556 aaPredicted RBP39.26■■■■□ 3.88
TPT1-205ENST00000442760 ERCC6Q03468 1493 aa39.17■■■■□ 3.86
TPT1-205ENST00000442760 CUX2O14529 1486 aa39.11■■■■□ 3.85
TPT1-205ENST00000442760 BAZ1BQ9UIG0 1483 aaKnown RBP39.11■■■■□ 3.85
TPT1-205ENST00000442760 PEG3Q9GZU2 1588 aa39.1■■■■□ 3.85
TPT1-205ENST00000442760 NESP48681 1621 aa39.04■■■■□ 3.84
TPT1-205ENST00000442760 MROH2BQ7Z745 1585 aa39.01■■■■□ 3.84
TPT1-205ENST00000442760 DNAJC5Q9H3Z4 198 aa39.01■■■■□ 3.84
TPT1-205ENST00000442760 LAMC3Q9Y6N6 1575 aa38.73■■■■□ 3.79
TPT1-205ENST00000442760 THOC2Q8NI27 1593 aaKnown RBP38.69■■■■□ 3.78
TPT1-205ENST00000442760 KIF21AQ7Z4S6 1674 aa38.56■■■■□ 3.76
TPT1-205ENST00000442760 WIZO95785 1651 aa38.55■■■■□ 3.76
TPT1-205ENST00000442760 PDS5BQ9NTI5 1447 aa38.44■■■■□ 3.74
TPT1-205ENST00000442760 CADPSQ9ULU8 1353 aa38.36■■■■□ 3.73
TPT1-205ENST00000442760 MRC2Q9UBG0 1479 aa38.18■■■■□ 3.7
TPT1-205ENST00000442760 RSF1Q96T23 1441 aaPredicted RBP38.16■■■■□ 3.7
TPT1-205ENST00000442760 WDR62O43379 1518 aa38.12■■■■□ 3.69
TPT1-205ENST00000442760 TOP2AP11388 1531 aaKnown RBP38.06■■■■□ 3.68
TPT1-205ENST00000442760 CEP164Q9UPV0 1460 aa38.03■■■■□ 3.68
TPT1-205ENST00000442760 FANCD2Q9BXW9 1451 aa37.97■■■■□ 3.67
TPT1-205ENST00000442760 CFTRP13569 1480 aa37.96■■■■□ 3.67
TPT1-205ENST00000442760 URB2Q14146 1524 aaKnown RBP37.71■■■■□ 3.63
TPT1-205ENST00000442760 PRDM2Q13029 1718 aa37.65■■■■□ 3.62
TPT1-205ENST00000442760 CCDC88BA6NC98 1476 aa37.58■■■■□ 3.61
TPT1-205ENST00000442760 TRIM41Q8WV44 630 aa37.33■■■■□ 3.57
TPT1-205ENST00000442760 TOPBP1Q92547 1522 aa37.27■■■■□ 3.56
TPT1-205ENST00000442760 IFT140Q96RY7 1462 aa37.24■■■■□ 3.55
TPT1-205ENST00000442760 ZNF608Q9ULD9 1512 aaPredicted RBP37.24■■■■□ 3.55
TPT1-205ENST00000442760 OSCARQ8IYS5 282 aa37.21■■■■□ 3.55
TPT1-205ENST00000442760 DNMBPQ6XZF7 1577 aa37.15■■■■□ 3.54
TPT1-205ENST00000442760 ABCC8Q09428 1581 aa37.1■■■■□ 3.53
TPT1-205ENST00000442760 EIF4G3O43432 1585 aaKnown RBP37.07■■■■□ 3.52
TPT1-205ENST00000442760 TARBP1Q13395 1621 aaKnown RBP36.97■■■■□ 3.51
TPT1-205ENST00000442760 POLA1P09884 1462 aaPredicted RBP36.9■■■■□ 3.5
TPT1-205ENST00000442760 RIMBP3CA6NJZ7 1639 aa36.9■■■■□ 3.5
TPT1-205ENST00000442760 RIMBP3BA6NNM3 1639 aa36.9■■■■□ 3.5
TPT1-205ENST00000442760 RIMBP3Q9UFD9 1639 aa36.9■■■■□ 3.5
TPT1-205ENST00000442760 AQRO60306 1485 aaKnown RBP eCLIP36.85■■■■□ 3.494e-9■■■■■ 33.3
TPT1-205ENST00000442760 CHD1O14646 1710 aa36.79■■■■□ 3.48
TPT1-205ENST00000442760 ARHGEF11O15085 1522 aa36.77■■■■□ 3.48
TPT1-205ENST00000442760 RAD54L2Q9Y4B4 1467 aa36.76■■■■□ 3.48
TPT1-205ENST00000442760 FGD5Q6ZNL6 1462 aa36.67■■■■□ 3.46
TPT1-205ENST00000442760 CUX1P39880 1505 aa36.66■■■■□ 3.46
TPT1-205ENST00000442760 SOGA1O94964 1423 aa36.66■■■■□ 3.46
TPT1-205ENST00000442760 TDRD9Q8NDG6 1382 aaKnown RBP36.61■■■■□ 3.45
TPT1-205ENST00000442760 WDR97A6NE52 1622 aa36.56■■■■□ 3.44
TPT1-205ENST00000442760 FBLN2P98095 1184 aa36.53■■■■□ 3.44
TPT1-205ENST00000442760 SNAPC4Q5SXM2 1469 aa36.53■■■■□ 3.44
TPT1-205ENST00000442760 ARAP1Q96P48 1450 aa36.43■■■■□ 3.42
TPT1-205ENST00000442760 SUPT5HO00267 1087 aaKnown RBP36.39■■■■□ 3.42
TPT1-205ENST00000442760 MAGI1Q96QZ7 1491 aaPredicted RBP36.38■■■■□ 3.41
TPT1-205ENST00000442760 CYB5RLQ6IPT4 315 aa36.38■■■■□ 3.41
TPT1-205ENST00000442760 GRIN2BQ13224 1484 aa36.37■■■■□ 3.41
TPT1-205ENST00000442760 CLASP1Q7Z460 1538 aa36.36■■■■□ 3.41
TPT1-205ENST00000442760 PBRM1Q86U86 1689 aa36.32■■■■□ 3.4
TPT1-205ENST00000442760 SYNJ1O43426 1573 aa36.28■■■■□ 3.4
TPT1-205ENST00000442760 SYNJ2O15056 1496 aa36.27■■■■□ 3.4
TPT1-205ENST00000442760 CHMP7Q8WUX9 453 aaPredicted RBP36.25■■■■□ 3.39
TPT1-205ENST00000442760 GAPVD1Q14C86 1478 aa36.24■■■■□ 3.39
TPT1-205ENST00000442760 ABCA5Q8WWZ7 1642 aa36.24■■■■□ 3.39
TPT1-205ENST00000442760 ABCA10Q8WWZ4 1543 aa36.24■■■■□ 3.39
TPT1-205ENST00000442760 BIVM-ERCC5R4GMW8 1640 aa36.08■■■■□ 3.37
TPT1-205ENST00000442760 TOP2BQ02880 1626 aa36.06■■■■□ 3.36
TPT1-205ENST00000442760 WRNQ14191 1432 aaPredicted RBP eCLIP36.04■■■■□ 3.36
TPT1-205ENST00000442760 ADAMTS12P58397 1594 aa35.98■■■■□ 3.35
TPT1-205ENST00000442760 TRHP20396 242 aaPredicted RBP35.96■■■■□ 3.35
TPT1-205ENST00000442760 GRIN2AQ12879 1464 aa35.93■■■■□ 3.34
TPT1-205ENST00000442760 CEP170Q5SW79 1584 aa35.86■■■■□ 3.33
TPT1-205ENST00000442760 ERCC6L2Q5T890 1561 aa35.82■■■■□ 3.32
TPT1-205ENST00000442760 NUP160Q12769 1436 aa35.82■■■■□ 3.32
TPT1-205ENST00000442760 FHAD1B1AJZ9 1412 aa35.78■■■■□ 3.32
TPT1-205ENST00000442760 ERICH3Q5RHP9 1530 aa35.78■■■■□ 3.32
TPT1-205ENST00000442760 SHROOM2Q13796 1616 aa35.69■■■■□ 3.3
TPT1-205ENST00000442760 RUSC2Q8N2Y8 1516 aa35.48■■■■□ 3.27
TPT1-205ENST00000442760 PRG4Q92954 1404 aaPredicted RBP35.43■■■■□ 3.26
TPT1-205ENST00000442760 JPH4Q96JJ6 628 aa35.34■■■■□ 3.25
TPT1-205ENST00000442760 CUL7Q14999 1698 aa35.28■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms