RNA–Protein interactions for RNA: ENST00000639044.1

RNF187-203, Transcript of ring finger protein 187, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RNF187, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF187-203ENST00000639044 NISCHQ9Y2I1 1504 aa45.67■■■■■ 4.9
RNF187-203ENST00000639044 CCDC180Q9P1Z9 1646 aa40.51■■■■■ 4.08
RNF187-203ENST00000639044 ABCC9O60706 1549 aa39.79■■■■□ 3.96
RNF187-203ENST00000639044 RB1CC1Q8TDY2 1594 aa38.18■■■■□ 3.7
RNF187-203ENST00000639044 NACADO15069 1562 aa38.16■■■■□ 3.7
RNF187-203ENST00000639044 DCAF8L2P0C7V8 631 aa38.16■■■■□ 3.7
RNF187-203ENST00000639044 ZCCHC6Q5VYS8 1495 aaKnown RBP38.02■■■■□ 3.68
RNF187-203ENST00000639044 MYO15BQ96JP2 1530 aa37.97■■■■□ 3.67
RNF187-203ENST00000639044 DCAF1Q9Y4B6 1507 aa37.78■■■■□ 3.64
RNF187-203ENST00000639044 UNC13AQ9UPW8 1703 aa37.33■■■■□ 3.57
RNF187-203ENST00000639044 PABPN1Q86U42 306 aaKnown RBP eCLIP37.24■■■■□ 3.55
RNF187-203ENST00000639044 BICRAQ9NZM4 1560 aa37.15■■■■□ 3.54
RNF187-203ENST00000639044 SCRIBQ14160 1630 aa36.99■■■■□ 3.51
RNF187-203ENST00000639044 DNAJC5BQ9UF47 199 aa36.76■■■■□ 3.48
RNF187-203ENST00000639044 SHROOM4Q9ULL8 1493 aa36.63■■■■□ 3.45
RNF187-203ENST00000639044 EIF4G1Q04637 1599 aaKnown RBP36.1■■■■□ 3.37
RNF187-203ENST00000639044 CC2D2AQ9P2K1 1620 aa35.97■■■■□ 3.35
RNF187-203ENST00000639044 CECR2Q9BXF3 1484 aa35.75■■■■□ 3.31
RNF187-203ENST00000639044 SMARCA4P51532 1647 aa35.4■■■■□ 3.26
RNF187-203ENST00000639044 BAZ1AQ9NRL2 1556 aaPredicted RBP35.34■■■■□ 3.25
RNF187-203ENST00000639044 NCAPD3P42695 1498 aa35.29■■■■□ 3.24
RNF187-203ENST00000639044 ATAD2BQ9ULI0 1458 aa35.29■■■■□ 3.24
RNF187-203ENST00000639044 MROH2BQ7Z745 1585 aa35.22■■■■□ 3.23
RNF187-203ENST00000639044 SMARCA2P51531 1590 aa35.16■■■■□ 3.22
RNF187-203ENST00000639044 PEG3Q9GZU2 1588 aa35.09■■■■□ 3.21
RNF187-203ENST00000639044 HMGXB3Q12766 1538 aa35.02■■■■□ 3.2
RNF187-203ENST00000639044 BAZ1BQ9UIG0 1483 aaKnown RBP34.91■■■■□ 3.18
RNF187-203ENST00000639044 RSF1Q96T23 1441 aaPredicted RBP34.82■■■■□ 3.17
RNF187-203ENST00000639044 WIZO95785 1651 aa34.79■■■■□ 3.16
RNF187-203ENST00000639044 NESP48681 1621 aa34.45■■■■□ 3.11
RNF187-203ENST00000639044 TOP2AP11388 1531 aaKnown RBP34.4■■■■□ 3.1
RNF187-203ENST00000639044 LAMC3Q9Y6N6 1575 aa34.27■■■■□ 3.08
RNF187-203ENST00000639044 CADPSQ9ULU8 1353 aa34.25■■■■□ 3.07
RNF187-203ENST00000639044 ERCC6Q03468 1493 aa34.21■■■■□ 3.07
RNF187-203ENST00000639044 CCDC88BA6NC98 1476 aa34.07■■■■□ 3.05
RNF187-203ENST00000639044 PDS5BQ9NTI5 1447 aa34.07■■■■□ 3.04
RNF187-203ENST00000639044 CFTRP13569 1480 aa34.03■■■■□ 3.04
RNF187-203ENST00000639044 KIF21AQ7Z4S6 1674 aa33.95■■■■□ 3.03
RNF187-203ENST00000639044 CUX2O14529 1486 aa33.92■■■■□ 3.02
RNF187-203ENST00000639044 THOC2Q8NI27 1593 aaKnown RBP33.87■■■■□ 3.01
RNF187-203ENST00000639044 SUPT5HO00267 1087 aaKnown RBP33.85■■■■□ 3.01
RNF187-203ENST00000639044 FANCD2Q9BXW9 1451 aa33.82■■■■□ 3
RNF187-203ENST00000639044 CEP164Q9UPV0 1460 aa33.73■■■□□ 2.99
RNF187-203ENST00000639044 MRC2Q9UBG0 1479 aa33.72■■■□□ 2.99
RNF187-203ENST00000639044 WDR62O43379 1518 aa33.61■■■□□ 2.97
RNF187-203ENST00000639044 PRDM2Q13029 1718 aa33.6■■■□□ 2.97
RNF187-203ENST00000639044 URB2Q14146 1524 aaKnown RBP33.52■■■□□ 2.96
RNF187-203ENST00000639044 TOPBP1Q92547 1522 aa33.28■■■□□ 2.92
RNF187-203ENST00000639044 ABCC8Q09428 1581 aa33.22■■■□□ 2.91
RNF187-203ENST00000639044 DNMBPQ6XZF7 1577 aa33.18■■■□□ 2.9
RNF187-203ENST00000639044 DNAJC5Q9H3Z4 198 aa33.08■■■□□ 2.89
RNF187-203ENST00000639044 IFT140Q96RY7 1462 aa33.05■■■□□ 2.88
RNF187-203ENST00000639044 CUX1P39880 1505 aa33.02■■■□□ 2.88
RNF187-203ENST00000639044 POLA1P09884 1462 aaPredicted RBP32.99■■■□□ 2.87
RNF187-203ENST00000639044 ZNF608Q9ULD9 1512 aaPredicted RBP32.98■■■□□ 2.87
RNF187-203ENST00000639044 TARBP1Q13395 1621 aaKnown RBP32.92■■■□□ 2.86
RNF187-203ENST00000639044 FGD5Q6ZNL6 1462 aa32.89■■■□□ 2.86
RNF187-203ENST00000639044 RAD54L2Q9Y4B4 1467 aa32.88■■■□□ 2.85
RNF187-203ENST00000639044 SOGA1O94964 1423 aa32.87■■■□□ 2.85
RNF187-203ENST00000639044 AQRO60306 1485 aaKnown RBP eCLIP32.79■■■□□ 2.844e-8■■■■■ 36.2
RNF187-203ENST00000639044 WRNQ14191 1432 aaPredicted RBP eCLIP32.77■■■□□ 2.84
RNF187-203ENST00000639044 EIF4G3O43432 1585 aaKnown RBP32.74■■■□□ 2.83
RNF187-203ENST00000639044 TDRD9Q8NDG6 1382 aaKnown RBP32.72■■■□□ 2.83
RNF187-203ENST00000639044 SYNJ1O43426 1573 aa32.69■■■□□ 2.82
RNF187-203ENST00000639044 TOP2BQ02880 1626 aa32.68■■■□□ 2.82
RNF187-203ENST00000639044 BIVM-ERCC5R4GMW8 1640 aa32.66■■■□□ 2.82
RNF187-203ENST00000639044 ABCA10Q8WWZ4 1543 aa32.59■■■□□ 2.81
RNF187-203ENST00000639044 WDR97A6NE52 1622 aa32.58■■■□□ 2.81
RNF187-203ENST00000639044 OSCARQ8IYS5 282 aa32.57■■■□□ 2.8
RNF187-203ENST00000639044 GRIN2BQ13224 1484 aa32.46■■■□□ 2.79
RNF187-203ENST00000639044 GAPVD1Q14C86 1478 aa32.46■■■□□ 2.79
RNF187-203ENST00000639044 ABCA5Q8WWZ7 1642 aa32.42■■■□□ 2.78
RNF187-203ENST00000639044 SNAPC4Q5SXM2 1469 aa32.42■■■□□ 2.78
RNF187-203ENST00000639044 MAGI1Q96QZ7 1491 aaPredicted RBP32.36■■■□□ 2.77
RNF187-203ENST00000639044 FBLN2P98095 1184 aa32.34■■■□□ 2.77
RNF187-203ENST00000639044 CHD1O14646 1710 aa32.32■■■□□ 2.76
RNF187-203ENST00000639044 PBRM1Q86U86 1689 aa32.31■■■□□ 2.76
RNF187-203ENST00000639044 CHMP7Q8WUX9 453 aaPredicted RBP32.26■■■□□ 2.75
RNF187-203ENST00000639044 SYNJ2O15056 1496 aa32.25■■■□□ 2.75
RNF187-203ENST00000639044 ERICH3Q5RHP9 1530 aa32.16■■■□□ 2.74
RNF187-203ENST00000639044 ADAMTS12P58397 1594 aa32.1■■■□□ 2.73
RNF187-203ENST00000639044 FHAD1B1AJZ9 1412 aa32.09■■■□□ 2.73
RNF187-203ENST00000639044 KIF27Q86VH2 1401 aa32.07■■■□□ 2.72
RNF187-203ENST00000639044 IGF1RP08069 1367 aa32.07■■■□□ 2.72
RNF187-203ENST00000639044 CLASP1Q7Z460 1538 aa32.05■■■□□ 2.72
RNF187-203ENST00000639044 GRIN2AQ12879 1464 aa32.04■■■□□ 2.72
RNF187-203ENST00000639044 ARHGEF11O15085 1522 aa32■■■□□ 2.71
RNF187-203ENST00000639044 RIMBP3CA6NJZ7 1639 aa31.99■■■□□ 2.71
RNF187-203ENST00000639044 RIMBP3BA6NNM3 1639 aa31.99■■■□□ 2.71
RNF187-203ENST00000639044 RIMBP3Q9UFD9 1639 aa31.99■■■□□ 2.71
RNF187-203ENST00000639044 TRIM41Q8WV44 630 aa31.96■■■□□ 2.71
RNF187-203ENST00000639044 NUP160Q12769 1436 aa31.95■■■□□ 2.71
RNF187-203ENST00000639044 CEP170Q5SW79 1584 aa31.9■■■□□ 2.7
RNF187-203ENST00000639044 RUSC2Q8N2Y8 1516 aa31.86■■■□□ 2.69
RNF187-203ENST00000639044 CARMIL1Q5VZK9 1371 aa31.81■■■□□ 2.68
RNF187-203ENST00000639044 CUL7Q14999 1698 aa31.79■■■□□ 2.68
RNF187-203ENST00000639044 ARAP1Q96P48 1450 aa31.77■■■□□ 2.68
RNF187-203ENST00000639044 CYB5RLQ6IPT4 315 aa31.76■■■□□ 2.67
RNF187-203ENST00000639044 SHROOM2Q13796 1616 aa31.67■■■□□ 2.66
RNF187-203ENST00000639044 JPH4Q96JJ6 628 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms