RNA–Protein interactions for RNA: ENST00000472438.5

UQCRC1-208, Transcript of ubiquinol-cytochrome c reductase core protein 1, humanhuman

TSL 2

Gene UQCRC1, Length 477 nt, Biotype retained intron, Subcellular localisation Mitochondria, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UQCRC1-208ENST00000472438 NISCHQ9Y2I1 1504 aa31.82■■■□□ 2.68
UQCRC1-208ENST00000472438 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
UQCRC1-208ENST00000472438 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
UQCRC1-208ENST00000472438 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
UQCRC1-208ENST00000472438 ABCC9O60706 1549 aa26.26■■□□□ 1.79
UQCRC1-208ENST00000472438 DCAF8L2P0C7V8 631 aa26.24■■□□□ 1.79
UQCRC1-208ENST00000472438 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
UQCRC1-208ENST00000472438 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
UQCRC1-208ENST00000472438 NACADO15069 1562 aa25.87■■□□□ 1.73
UQCRC1-208ENST00000472438 RB1CC1Q8TDY2 1594 aa25.65■■□□□ 1.7
UQCRC1-208ENST00000472438 SCRIBQ14160 1630 aa25.5■■□□□ 1.67
UQCRC1-208ENST00000472438 UNC13AQ9UPW8 1703 aa25.06■■□□□ 1.6
UQCRC1-208ENST00000472438 SUPT5HO00267 1087 aaKnown RBP24.91■■□□□ 1.58
UQCRC1-208ENST00000472438 BICRAQ9NZM4 1560 aa24.87■■□□□ 1.57
UQCRC1-208ENST00000472438 PABPN1Q86U42 306 aaKnown RBP eCLIP24.77■■□□□ 1.56
UQCRC1-208ENST00000472438 CECR2Q9BXF3 1484 aa24.72■■□□□ 1.55
UQCRC1-208ENST00000472438 RSF1Q96T23 1441 aaPredicted RBP24.68■■□□□ 1.54
UQCRC1-208ENST00000472438 MROH2BQ7Z745 1585 aa24.58■■□□□ 1.52
UQCRC1-208ENST00000472438 BAZ1AQ9NRL2 1556 aaPredicted RBP24.57■■□□□ 1.52
UQCRC1-208ENST00000472438 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
UQCRC1-208ENST00000472438 WIZO95785 1651 aa24.35■■□□□ 1.49
UQCRC1-208ENST00000472438 DNAJC5BQ9UF47 199 aa24.25■■□□□ 1.47
UQCRC1-208ENST00000472438 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
UQCRC1-208ENST00000472438 TOP2AP11388 1531 aaKnown RBP24.14■■□□□ 1.45
UQCRC1-208ENST00000472438 EIF4G1Q04637 1599 aaKnown RBP24.12■■□□□ 1.45
UQCRC1-208ENST00000472438 ATAD2BQ9ULI0 1458 aa24.08■■□□□ 1.45
UQCRC1-208ENST00000472438 SMARCA2P51531 1590 aa24.06■■□□□ 1.44
UQCRC1-208ENST00000472438 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
UQCRC1-208ENST00000472438 CCDC88BA6NC98 1476 aa23.88■■□□□ 1.41
UQCRC1-208ENST00000472438 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
UQCRC1-208ENST00000472438 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
UQCRC1-208ENST00000472438 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
UQCRC1-208ENST00000472438 CC2D2AQ9P2K1 1620 aa23.76■■□□□ 1.39
UQCRC1-208ENST00000472438 TRIM41Q8WV44 630 aa23.43■■□□□ 1.34
UQCRC1-208ENST00000472438 CFTRP13569 1480 aa23.34■■□□□ 1.33
UQCRC1-208ENST00000472438 ABCC8Q09428 1581 aa23.34■■□□□ 1.33
UQCRC1-208ENST00000472438 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.32
UQCRC1-208ENST00000472438 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
UQCRC1-208ENST00000472438 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
UQCRC1-208ENST00000472438 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
UQCRC1-208ENST00000472438 LAMC3Q9Y6N6 1575 aa23.06■■□□□ 1.28
UQCRC1-208ENST00000472438 NESP48681 1621 aa23.04■■□□□ 1.28
UQCRC1-208ENST00000472438 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
UQCRC1-208ENST00000472438 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
UQCRC1-208ENST00000472438 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
UQCRC1-208ENST00000472438 FAM9AQ8IZU1 332 aaPredicted RBP23■■□□□ 1.27
UQCRC1-208ENST00000472438 CUX1P39880 1505 aa22.98■■□□□ 1.27
UQCRC1-208ENST00000472438 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
UQCRC1-208ENST00000472438 SOGA1O94964 1423 aa22.91■■□□□ 1.26
UQCRC1-208ENST00000472438 EEA1Q15075 1411 aa22.91■■□□□ 1.26
UQCRC1-208ENST00000472438 PDS5BQ9NTI5 1447 aa22.9■■□□□ 1.26
UQCRC1-208ENST00000472438 CEP164Q9UPV0 1460 aa22.86■■□□□ 1.25
UQCRC1-208ENST00000472438 RUSC2Q8N2Y8 1516 aa22.83■■□□□ 1.25
UQCRC1-208ENST00000472438 DNMBPQ6XZF7 1577 aa22.8■■□□□ 1.24
UQCRC1-208ENST00000472438 CSRNP3Q8WYN3 585 aa22.76■■□□□ 1.23
UQCRC1-208ENST00000472438 TOPBP1Q92547 1522 aa22.76■■□□□ 1.23
UQCRC1-208ENST00000472438 FGD5Q6ZNL6 1462 aa22.74■■□□□ 1.23
UQCRC1-208ENST00000472438 KIF21AQ7Z4S6 1674 aa22.73■■□□□ 1.23
UQCRC1-208ENST00000472438 URB2Q14146 1524 aaKnown RBP22.72■■□□□ 1.23
UQCRC1-208ENST00000472438 KIF27Q86VH2 1401 aa22.65■■□□□ 1.22
UQCRC1-208ENST00000472438 EHMT2Q96KQ7 1210 aa22.64■■□□□ 1.21
UQCRC1-208ENST00000472438 POLA1P09884 1462 aaPredicted RBP22.64■■□□□ 1.21
UQCRC1-208ENST00000472438 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
UQCRC1-208ENST00000472438 CUX2O14529 1486 aa22.6■■□□□ 1.21
UQCRC1-208ENST00000472438 KIF21BO75037 1637 aa22.58■■□□□ 1.21
UQCRC1-208ENST00000472438 GOLGA3Q08378 1498 aa22.58■■□□□ 1.2
UQCRC1-208ENST00000472438 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
UQCRC1-208ENST00000472438 ABCA10Q8WWZ4 1543 aa22.56■■□□□ 1.2
UQCRC1-208ENST00000472438 ERCC6Q03468 1493 aa22.53■■□□□ 1.2
UQCRC1-208ENST00000472438 TNIKQ9UKE5 1360 aa22.5■■□□□ 1.19
UQCRC1-208ENST00000472438 PRXQ9BXM0 1461 aa22.49■■□□□ 1.19
UQCRC1-208ENST00000472438 WDR62O43379 1518 aa22.49■■□□□ 1.19
UQCRC1-208ENST00000472438 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.18
UQCRC1-208ENST00000472438 IGF1RP08069 1367 aa22.45■■□□□ 1.18
UQCRC1-208ENST00000472438 RAPGEF2Q9Y4G8 1499 aa22.45■■□□□ 1.18
UQCRC1-208ENST00000472438 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.18
UQCRC1-208ENST00000472438 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
UQCRC1-208ENST00000472438 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
UQCRC1-208ENST00000472438 TARBP1Q13395 1621 aaKnown RBP22.4■■□□□ 1.18
UQCRC1-208ENST00000472438 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
UQCRC1-208ENST00000472438 CEP162Q5TB80 1403 aa22.35■■□□□ 1.17
UQCRC1-208ENST00000472438 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
UQCRC1-208ENST00000472438 CARMIL1Q5VZK9 1371 aa22.34■■□□□ 1.17
UQCRC1-208ENST00000472438 TDRD9Q8NDG6 1382 aaKnown RBP22.34■■□□□ 1.17
UQCRC1-208ENST00000472438 GAPVD1Q14C86 1478 aa22.32■■□□□ 1.16
UQCRC1-208ENST00000472438 CUL7Q14999 1698 aa22.26■■□□□ 1.15
UQCRC1-208ENST00000472438 DNAJC5Q9H3Z4 198 aa22.23■■□□□ 1.15
UQCRC1-208ENST00000472438 CLIP1P30622 1438 aa22.21■■□□□ 1.15
UQCRC1-208ENST00000472438 AQRO60306 1485 aaKnown RBP eCLIP22.21■■□□□ 1.159e-8■■■■■ 41.5
UQCRC1-208ENST00000472438 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
UQCRC1-208ENST00000472438 GRIN2BQ13224 1484 aa22.16■■□□□ 1.14
UQCRC1-208ENST00000472438 PBRM1Q86U86 1689 aa22.16■■□□□ 1.14
UQCRC1-208ENST00000472438 EIF4G3O43432 1585 aaKnown RBP22.09■■□□□ 1.13
UQCRC1-208ENST00000472438 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
UQCRC1-208ENST00000472438 ADAMTS12P58397 1594 aa22.08■■□□□ 1.13
UQCRC1-208ENST00000472438 RANGAP1P46060 587 aaPredicted RBP22.06■■□□□ 1.12
UQCRC1-208ENST00000472438 SNAPC4Q5SXM2 1469 aa22.02■■□□□ 1.12
UQCRC1-208ENST00000472438 VPS8Q8N3P4 1428 aa22.01■■□□□ 1.11
UQCRC1-208ENST00000472438 ARAP1Q96P48 1450 aa22■■□□□ 1.11
UQCRC1-208ENST00000472438 ARHGAP35Q9NRY4 1499 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms