RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 NISCHQ9Y2I1 1504 aa43.85■■■■■ 4.61
CKLF-CMTM1-202ENST00000527845 CCDC180Q9P1Z9 1646 aa39.47■■■■□ 3.91
CKLF-CMTM1-202ENST00000527845 ABCC9O60706 1549 aa39.23■■■■□ 3.87
CKLF-CMTM1-202ENST00000527845 RB1CC1Q8TDY2 1594 aa37.51■■■■□ 3.6
CKLF-CMTM1-202ENST00000527845 NACADO15069 1562 aa37.26■■■■□ 3.56
CKLF-CMTM1-202ENST00000527845 DCAF8L2P0C7V8 631 aa36.83■■■■□ 3.49
CKLF-CMTM1-202ENST00000527845 MYO15BQ96JP2 1530 aa36.8■■■■□ 3.48
CKLF-CMTM1-202ENST00000527845 DNAJC5BQ9UF47 199 aa36.62■■■■□ 3.45
CKLF-CMTM1-202ENST00000527845 UNC13AQ9UPW8 1703 aa36.6■■■■□ 3.45
CKLF-CMTM1-202ENST00000527845 PABPN1Q86U42 306 aaKnown RBP eCLIP36.43■■■■□ 3.42
CKLF-CMTM1-202ENST00000527845 ZCCHC6Q5VYS8 1495 aaKnown RBP36.37■■■■□ 3.41
CKLF-CMTM1-202ENST00000527845 DCAF1Q9Y4B6 1507 aa36.33■■■■□ 3.41
CKLF-CMTM1-202ENST00000527845 BICRAQ9NZM4 1560 aa36.31■■■■□ 3.4
CKLF-CMTM1-202ENST00000527845 SHROOM4Q9ULL8 1493 aa36.04■■■■□ 3.36
CKLF-CMTM1-202ENST00000527845 SCRIBQ14160 1630 aa35.81■■■■□ 3.32
CKLF-CMTM1-202ENST00000527845 CC2D2AQ9P2K1 1620 aa35.5■■■■□ 3.27
CKLF-CMTM1-202ENST00000527845 EIF4G1Q04637 1599 aaKnown RBP35.46■■■■□ 3.27
CKLF-CMTM1-202ENST00000527845 CECR2Q9BXF3 1484 aa35.39■■■■□ 3.26
CKLF-CMTM1-202ENST00000527845 NCAPD3P42695 1498 aa34.34■■■■□ 3.09
CKLF-CMTM1-202ENST00000527845 SMARCA4P51532 1647 aa34.22■■■■□ 3.07
CKLF-CMTM1-202ENST00000527845 ATAD2BQ9ULI0 1458 aa34.21■■■■□ 3.07
CKLF-CMTM1-202ENST00000527845 SMARCA2P51531 1590 aa34.21■■■■□ 3.07
CKLF-CMTM1-202ENST00000527845 HMGXB3Q12766 1538 aa34.16■■■■□ 3.06
CKLF-CMTM1-202ENST00000527845 BAZ1AQ9NRL2 1556 aaPredicted RBP34.1■■■■□ 3.05
CKLF-CMTM1-202ENST00000527845 CUX2O14529 1486 aa33.95■■■■□ 3.02
CKLF-CMTM1-202ENST00000527845 ERCC6Q03468 1493 aa33.95■■■■□ 3.02
CKLF-CMTM1-202ENST00000527845 PEG3Q9GZU2 1588 aa33.94■■■■□ 3.02
CKLF-CMTM1-202ENST00000527845 BAZ1BQ9UIG0 1483 aaKnown RBP33.91■■■■□ 3.02
CKLF-CMTM1-202ENST00000527845 DNAJC5Q9H3Z4 198 aa33.74■■■□□ 2.99
CKLF-CMTM1-202ENST00000527845 MROH2BQ7Z745 1585 aa33.72■■■□□ 2.99
CKLF-CMTM1-202ENST00000527845 NESP48681 1621 aa33.68■■■□□ 2.98
CKLF-CMTM1-202ENST00000527845 LAMC3Q9Y6N6 1575 aa33.63■■■□□ 2.97
CKLF-CMTM1-202ENST00000527845 THOC2Q8NI27 1593 aaKnown RBP33.46■■■□□ 2.95
CKLF-CMTM1-202ENST00000527845 PDS5BQ9NTI5 1447 aa33.39■■■□□ 2.94
CKLF-CMTM1-202ENST00000527845 KIF21AQ7Z4S6 1674 aa33.35■■■□□ 2.93
CKLF-CMTM1-202ENST00000527845 WIZO95785 1651 aa33.34■■■□□ 2.93
CKLF-CMTM1-202ENST00000527845 CADPSQ9ULU8 1353 aa33.27■■■□□ 2.92
CKLF-CMTM1-202ENST00000527845 MRC2Q9UBG0 1479 aa33.09■■■□□ 2.89
CKLF-CMTM1-202ENST00000527845 RSF1Q96T23 1441 aaPredicted RBP33.04■■■□□ 2.88
CKLF-CMTM1-202ENST00000527845 WDR62O43379 1518 aa33.02■■■□□ 2.88
CKLF-CMTM1-202ENST00000527845 TOP2AP11388 1531 aaKnown RBP33■■■□□ 2.87
CKLF-CMTM1-202ENST00000527845 CEP164Q9UPV0 1460 aa32.98■■■□□ 2.87
CKLF-CMTM1-202ENST00000527845 CFTRP13569 1480 aa32.92■■■□□ 2.86
CKLF-CMTM1-202ENST00000527845 FANCD2Q9BXW9 1451 aa32.9■■■□□ 2.86
CKLF-CMTM1-202ENST00000527845 PRDM2Q13029 1718 aa32.72■■■□□ 2.83
CKLF-CMTM1-202ENST00000527845 URB2Q14146 1524 aaKnown RBP32.59■■■□□ 2.81
CKLF-CMTM1-202ENST00000527845 CCDC88BA6NC98 1476 aa32.54■■■□□ 2.8
CKLF-CMTM1-202ENST00000527845 ABCC8Q09428 1581 aa32.32■■■□□ 2.77
CKLF-CMTM1-202ENST00000527845 IFT140Q96RY7 1462 aa32.32■■■□□ 2.76
CKLF-CMTM1-202ENST00000527845 OSCARQ8IYS5 282 aa32.29■■■□□ 2.76
CKLF-CMTM1-202ENST00000527845 TOPBP1Q92547 1522 aa32.28■■■□□ 2.76
CKLF-CMTM1-202ENST00000527845 TRIM41Q8WV44 630 aa32.22■■■□□ 2.75
CKLF-CMTM1-202ENST00000527845 DNMBPQ6XZF7 1577 aa32.22■■■□□ 2.75
CKLF-CMTM1-202ENST00000527845 ZNF608Q9ULD9 1512 aaPredicted RBP32.15■■■□□ 2.74
CKLF-CMTM1-202ENST00000527845 EIF4G3O43432 1585 aaKnown RBP32.08■■■□□ 2.73
CKLF-CMTM1-202ENST00000527845 TARBP1Q13395 1621 aaKnown RBP32■■■□□ 2.71
CKLF-CMTM1-202ENST00000527845 POLA1P09884 1462 aaPredicted RBP31.95■■■□□ 2.7
CKLF-CMTM1-202ENST00000527845 RIMBP3CA6NJZ7 1639 aa31.9■■■□□ 2.7
CKLF-CMTM1-202ENST00000527845 RIMBP3BA6NNM3 1639 aa31.9■■■□□ 2.7
CKLF-CMTM1-202ENST00000527845 RIMBP3Q9UFD9 1639 aa31.9■■■□□ 2.7
CKLF-CMTM1-202ENST00000527845 AQRO60306 1485 aaKnown RBP eCLIP31.85■■■□□ 2.69
CKLF-CMTM1-202ENST00000527845 WDR97A6NE52 1622 aa31.84■■■□□ 2.69
CKLF-CMTM1-202ENST00000527845 CHD1O14646 1710 aa31.83■■■□□ 2.69
CKLF-CMTM1-202ENST00000527845 ARHGEF11O15085 1522 aa31.8■■■□□ 2.68
CKLF-CMTM1-202ENST00000527845 SOGA1O94964 1423 aa31.79■■■□□ 2.68
CKLF-CMTM1-202ENST00000527845 RAD54L2Q9Y4B4 1467 aa31.76■■■□□ 2.67
CKLF-CMTM1-202ENST00000527845 FGD5Q6ZNL6 1462 aa31.75■■■□□ 2.67
CKLF-CMTM1-202ENST00000527845 CUX1P39880 1505 aa31.7■■■□□ 2.67
CKLF-CMTM1-202ENST00000527845 TDRD9Q8NDG6 1382 aaKnown RBP31.66■■■□□ 2.66
CKLF-CMTM1-202ENST00000527845 FBLN2P98095 1184 aa31.63■■■□□ 2.65
CKLF-CMTM1-202ENST00000527845 SNAPC4Q5SXM2 1469 aa31.59■■■□□ 2.65
CKLF-CMTM1-202ENST00000527845 MAGI1Q96QZ7 1491 aaPredicted RBP31.59■■■□□ 2.65
CKLF-CMTM1-202ENST00000527845 GRIN2BQ13224 1484 aa31.56■■■□□ 2.64
CKLF-CMTM1-202ENST00000527845 SYNJ1O43426 1573 aa31.51■■■□□ 2.63
CKLF-CMTM1-202ENST00000527845 SUPT5HO00267 1087 aaKnown RBP31.5■■■□□ 2.63
CKLF-CMTM1-202ENST00000527845 PBRM1Q86U86 1689 aa31.48■■■□□ 2.63
CKLF-CMTM1-202ENST00000527845 CLASP1Q7Z460 1538 aa31.47■■■□□ 2.63
CKLF-CMTM1-202ENST00000527845 ARAP1Q96P48 1450 aa31.46■■■□□ 2.63
CKLF-CMTM1-202ENST00000527845 CYB5RLQ6IPT4 315 aa31.46■■■□□ 2.63
CKLF-CMTM1-202ENST00000527845 SYNJ2O15056 1496 aa31.46■■■□□ 2.63
CKLF-CMTM1-202ENST00000527845 CHMP7Q8WUX9 453 aaPredicted RBP31.45■■■□□ 2.63
CKLF-CMTM1-202ENST00000527845 ABCA10Q8WWZ4 1543 aa31.44■■■□□ 2.62
CKLF-CMTM1-202ENST00000527845 GAPVD1Q14C86 1478 aa31.43■■■□□ 2.62
CKLF-CMTM1-202ENST00000527845 ABCA5Q8WWZ7 1642 aa31.4■■■□□ 2.62
CKLF-CMTM1-202ENST00000527845 BIVM-ERCC5R4GMW8 1640 aa31.3■■■□□ 2.6
CKLF-CMTM1-202ENST00000527845 WRNQ14191 1432 aaPredicted RBP eCLIP31.3■■■□□ 2.6
CKLF-CMTM1-202ENST00000527845 TOP2BQ02880 1626 aa31.27■■■□□ 2.6
CKLF-CMTM1-202ENST00000527845 ADAMTS12P58397 1594 aa31.16■■■□□ 2.58
CKLF-CMTM1-202ENST00000527845 GRIN2AQ12879 1464 aa31.14■■■□□ 2.58
CKLF-CMTM1-202ENST00000527845 TRHP20396 242 aaPredicted RBP31.13■■■□□ 2.57
CKLF-CMTM1-202ENST00000527845 ERICH3Q5RHP9 1530 aa31.08■■■□□ 2.57
CKLF-CMTM1-202ENST00000527845 FHAD1B1AJZ9 1412 aa31.05■■■□□ 2.56
CKLF-CMTM1-202ENST00000527845 NUP160Q12769 1436 aa31.04■■■□□ 2.56
CKLF-CMTM1-202ENST00000527845 CEP170Q5SW79 1584 aa31■■■□□ 2.55
CKLF-CMTM1-202ENST00000527845 SHROOM2Q13796 1616 aa30.94■■■□□ 2.54
CKLF-CMTM1-202ENST00000527845 ERCC6L2Q5T890 1561 aa30.87■■■□□ 2.53
CKLF-CMTM1-202ENST00000527845 RUSC2Q8N2Y8 1516 aa30.72■■■□□ 2.51
CKLF-CMTM1-202ENST00000527845 PRG4Q92954 1404 aaPredicted RBP30.69■■■□□ 2.5
CKLF-CMTM1-202ENST00000527845 CUL7Q14999 1698 aa30.67■■■□□ 2.5
CKLF-CMTM1-202ENST00000527845 KIF27Q86VH2 1401 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms