RNA–Protein interactions for RNA: ENST00000419155.5

PHF19-203, Transcript of PHD finger protein 19, humanhuman

TSL 2 BASIC

Gene PHF19, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF19-203ENST00000419155 NISCHQ9Y2I1 1504 aa31.58■■■□□ 2.65
PHF19-203ENST00000419155 SHROOM4Q9ULL8 1493 aa27.91■■■□□ 2.06
PHF19-203ENST00000419155 DCAF8L2P0C7V8 631 aa27.87■■■□□ 2.05
PHF19-203ENST00000419155 SUPT5HO00267 1087 aaKnown RBP27.3■■□□□ 1.96
PHF19-203ENST00000419155 ZCCHC6Q5VYS8 1495 aaKnown RBP26.52■■□□□ 1.84
PHF19-203ENST00000419155 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
PHF19-203ENST00000419155 ABCC9O60706 1549 aa25.97■■□□□ 1.75
PHF19-203ENST00000419155 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
PHF19-203ENST00000419155 EHMT2Q96KQ7 1210 aa25.67■■□□□ 1.7
PHF19-203ENST00000419155 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
PHF19-203ENST00000419155 LOC105371045A0A1W2PR82 267 aa25.46■■□□□ 1.67
PHF19-203ENST00000419155 MYO15BQ96JP2 1530 aa25.44■■□□□ 1.66
PHF19-203ENST00000419155 FAM9AQ8IZU1 332 aaPredicted RBP25.44■■□□□ 1.66
PHF19-203ENST00000419155 DCAF1Q9Y4B6 1507 aa25.38■■□□□ 1.65
PHF19-203ENST00000419155 PCGF6Q9BYE7 350 aa25.17■■□□□ 1.62
PHF19-203ENST00000419155 PABPN1Q86U42 306 aaKnown RBP eCLIP25.15■■□□□ 1.62
PHF19-203ENST00000419155 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
PHF19-203ENST00000419155 RSF1Q96T23 1441 aaPredicted RBP25.08■■□□□ 1.61
PHF19-203ENST00000419155 CECR2Q9BXF3 1484 aa25.03■■□□□ 1.6
PHF19-203ENST00000419155 NACADO15069 1562 aa24.84■■□□□ 1.57
PHF19-203ENST00000419155 PPARGC1BQ86YN6 1023 aaKnown RBP24.77■■□□□ 1.56
PHF19-203ENST00000419155 RB1CC1Q8TDY2 1594 aa24.77■■□□□ 1.56
PHF19-203ENST00000419155 MROH2BQ7Z745 1585 aa24.75■■□□□ 1.55
PHF19-203ENST00000419155 TTBK1Q5TCY1 1321 aaPredicted RBP24.66■■□□□ 1.54
PHF19-203ENST00000419155 WIZO95785 1651 aa24.57■■□□□ 1.52
PHF19-203ENST00000419155 HRCP23327 699 aa24.43■■□□□ 1.5
PHF19-203ENST00000419155 RANGAP1P46060 587 aaPredicted RBP24.37■■□□□ 1.49
PHF19-203ENST00000419155 TRIM26Q12899 539 aaPredicted RBP24.28■■□□□ 1.48
PHF19-203ENST00000419155 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
PHF19-203ENST00000419155 UBTFP17480 764 aaKnown RBP24.21■■□□□ 1.47
PHF19-203ENST00000419155 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
PHF19-203ENST00000419155 CCDC88BA6NC98 1476 aa24.13■■□□□ 1.45
PHF19-203ENST00000419155 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
PHF19-203ENST00000419155 UNC13AQ9UPW8 1703 aa24.05■■□□□ 1.44
PHF19-203ENST00000419155 SOGA1O94964 1423 aa23.94■■□□□ 1.42
PHF19-203ENST00000419155 TOP2AP11388 1531 aaKnown RBP23.93■■□□□ 1.42
PHF19-203ENST00000419155 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
PHF19-203ENST00000419155 CSRNP3Q8WYN3 585 aa23.87■■□□□ 1.41
PHF19-203ENST00000419155 SMARCA2P51531 1590 aa23.85■■□□□ 1.41
PHF19-203ENST00000419155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.85■■□□□ 1.41
PHF19-203ENST00000419155 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
PHF19-203ENST00000419155 BAZ1BQ9UIG0 1483 aaKnown RBP23.77■■□□□ 1.4
PHF19-203ENST00000419155 CCER1Q8TC90 406 aaPredicted RBP23.73■■□□□ 1.39
PHF19-203ENST00000419155 ATAD2BQ9ULI0 1458 aa23.7■■□□□ 1.38
PHF19-203ENST00000419155 WRNQ14191 1432 aaPredicted RBP eCLIP23.69■■□□□ 1.38
PHF19-203ENST00000419155 HNRNPUL2Q1KMD3 747 aaKnown RBP23.58■■□□□ 1.37
PHF19-203ENST00000419155 CEP162Q5TB80 1403 aa23.58■■□□□ 1.37
PHF19-203ENST00000419155 APLP2Q06481 763 aa23.55■■□□□ 1.36
PHF19-203ENST00000419155 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.36
PHF19-203ENST00000419155 ZEB1P37275 1124 aaPredicted RBP23.44■■□□□ 1.34
PHF19-203ENST00000419155 SYNJ1O43426 1573 aa23.39■■□□□ 1.34
PHF19-203ENST00000419155 ATP1B4Q9UN42 357 aaPredicted RBP23.39■■□□□ 1.34
PHF19-203ENST00000419155 TNIKQ9UKE5 1360 aa23.38■■□□□ 1.33
PHF19-203ENST00000419155 GOLGA3Q08378 1498 aa23.33■■□□□ 1.33
PHF19-203ENST00000419155 ITGAEP38570 1179 aa23.31■■□□□ 1.32
PHF19-203ENST00000419155 CLIP1P30622 1438 aa23.28■■□□□ 1.32
PHF19-203ENST00000419155 P3H3Q8IVL6 736 aa23.27■■□□□ 1.32
PHF19-203ENST00000419155 RAPGEF2Q9Y4G8 1499 aa23.26■■□□□ 1.31
PHF19-203ENST00000419155 EEA1Q15075 1411 aa23.24■■□□□ 1.31
PHF19-203ENST00000419155 PEG3Q9GZU2 1588 aa23.21■■□□□ 1.31
PHF19-203ENST00000419155 CEP164Q9UPV0 1460 aa23.19■■□□□ 1.3
PHF19-203ENST00000419155 DNAJC5BQ9UF47 199 aa23.16■■□□□ 1.3
PHF19-203ENST00000419155 NCAPD3P42695 1498 aa23.12■■□□□ 1.29
PHF19-203ENST00000419155 KANK4Q5T7N3 995 aaPredicted RBP23.03■■□□□ 1.28
PHF19-203ENST00000419155 CUX1P39880 1505 aa22.99■■□□□ 1.27
PHF19-203ENST00000419155 KIF27Q86VH2 1401 aa22.98■■□□□ 1.27
PHF19-203ENST00000419155 CUX2O14529 1486 aa22.98■■□□□ 1.27
PHF19-203ENST00000419155 CADPSQ9ULU8 1353 aa22.95■■□□□ 1.27
PHF19-203ENST00000419155 NESP48681 1621 aa22.92■■□□□ 1.26
PHF19-203ENST00000419155 VPS8Q8N3P4 1428 aa22.92■■□□□ 1.26
PHF19-203ENST00000419155 CFTRP13569 1480 aa22.91■■□□□ 1.26
PHF19-203ENST00000419155 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
PHF19-203ENST00000419155 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
PHF19-203ENST00000419155 HMGXB3Q12766 1538 aa22.89■■□□□ 1.25
PHF19-203ENST00000419155 DIEXFQ68CQ4 756 aaKnown RBP22.88■■□□□ 1.25
PHF19-203ENST00000419155 YTHDC1Q96MU7 727 aaKnown RBP22.88■■□□□ 1.25
PHF19-203ENST00000419155 ARID3CA6NKF2 412 aa22.87■■□□□ 1.25
PHF19-203ENST00000419155 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.25
PHF19-203ENST00000419155 KIF21BO75037 1637 aa22.81■■□□□ 1.24
PHF19-203ENST00000419155 RAD54L2Q9Y4B4 1467 aa22.8■■□□□ 1.24
PHF19-203ENST00000419155 CARMIL1Q5VZK9 1371 aa22.8■■□□□ 1.24
PHF19-203ENST00000419155 FGD5Q6ZNL6 1462 aa22.78■■□□□ 1.24
PHF19-203ENST00000419155 IGF1RP08069 1367 aa22.77■■□□□ 1.24
PHF19-203ENST00000419155 FANCD2Q9BXW9 1451 aa22.76■■□□□ 1.23
PHF19-203ENST00000419155 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
PHF19-203ENST00000419155 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
PHF19-203ENST00000419155 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
PHF19-203ENST00000419155 BIVM-ERCC5R4GMW8 1640 aa22.66■■□□□ 1.22
PHF19-203ENST00000419155 ZNF316A6NFI3 1004 aaPredicted RBP22.65■■□□□ 1.22
PHF19-203ENST00000419155 NEUROD1Q13562 356 aa22.61■■□□□ 1.21
PHF19-203ENST00000419155 ARHGAP35Q9NRY4 1499 aa22.58■■□□□ 1.21
PHF19-203ENST00000419155 FHOD3Q2V2M9 1422 aa22.56■■□□□ 1.2
PHF19-203ENST00000419155 FBLN2P98095 1184 aa22.55■■□□□ 1.2
PHF19-203ENST00000419155 ERICH3Q5RHP9 1530 aa22.5■■□□□ 1.19
PHF19-203ENST00000419155 POLA1P09884 1462 aaPredicted RBP22.48■■□□□ 1.19
PHF19-203ENST00000419155 SCAF1Q9H7N4 1312 aaKnown RBP22.48■■□□□ 1.19
PHF19-203ENST00000419155 MIER1Q8N108 512 aa22.47■■□□□ 1.19
PHF19-203ENST00000419155 TOPBP1Q92547 1522 aa22.46■■□□□ 1.19
PHF19-203ENST00000419155 CCNB3Q8WWL7 1395 aa22.45■■□□□ 1.19
PHF19-203ENST00000419155 HIRIP3Q9BW71 556 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms