RNA–Protein interactions for RNA: ENST00000477023.1

MRPL38-207, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 3

Gene MRPL38, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-207ENST00000477023 AEBP2Q6ZN18 517 aaPredicted RBP22.75■■□□□ 1.23
MRPL38-207ENST00000477023 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
MRPL38-207ENST00000477023 NISCHQ9Y2I1 1504 aa21.82■■□□□ 1.08
MRPL38-207ENST00000477023 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
MRPL38-207ENST00000477023 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
MRPL38-207ENST00000477023 CCDC180Q9P1Z9 1646 aa18.86■□□□□ 0.61
MRPL38-207ENST00000477023 PLPPR3Q6T4P5 718 aa18.52■□□□□ 0.56
MRPL38-207ENST00000477023 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
MRPL38-207ENST00000477023 DCAF1Q9Y4B6 1507 aa18.19■□□□□ 0.5
MRPL38-207ENST00000477023 SHROOM4Q9ULL8 1493 aa17.93■□□□□ 0.46
MRPL38-207ENST00000477023 FOXD1Q16676 465 aa17.82■□□□□ 0.44
MRPL38-207ENST00000477023 MYO15BQ96JP2 1530 aa17.79■□□□□ 0.44
MRPL38-207ENST00000477023 DCAF8L2P0C7V8 631 aa17.57■□□□□ 0.4
MRPL38-207ENST00000477023 SUPT5HO00267 1087 aaKnown RBP17.56■□□□□ 0.4
MRPL38-207ENST00000477023 NACADO15069 1562 aa17.42■□□□□ 0.38
MRPL38-207ENST00000477023 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
MRPL38-207ENST00000477023 ADRA2BP18089 450 aa17.41■□□□□ 0.38
MRPL38-207ENST00000477023 ABCC9O60706 1549 aa17.39■□□□□ 0.37
MRPL38-207ENST00000477023 SCRIBQ14160 1630 aa17.21■□□□□ 0.35
MRPL38-207ENST00000477023 RSF1Q96T23 1441 aaPredicted RBP17.11■□□□□ 0.33
MRPL38-207ENST00000477023 RB1CC1Q8TDY2 1594 aa17.09■□□□□ 0.33
MRPL38-207ENST00000477023 PIAS4Q8N2W9 510 aaPredicted RBP16.87■□□□□ 0.29
MRPL38-207ENST00000477023 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
MRPL38-207ENST00000477023 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
MRPL38-207ENST00000477023 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
MRPL38-207ENST00000477023 WIZO95785 1651 aa16.69■□□□□ 0.26
MRPL38-207ENST00000477023 UNC13AQ9UPW8 1703 aa16.68■□□□□ 0.26
MRPL38-207ENST00000477023 SMARCA4P51532 1647 aa16.65■□□□□ 0.26
MRPL38-207ENST00000477023 TOP2AP11388 1531 aaKnown RBP16.63■□□□□ 0.25
MRPL38-207ENST00000477023 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
MRPL38-207ENST00000477023 TRIM41Q8WV44 630 aa16.59■□□□□ 0.25
MRPL38-207ENST00000477023 PEG3Q9GZU2 1588 aa16.52■□□□□ 0.24
MRPL38-207ENST00000477023 BICRAQ9NZM4 1560 aa16.51■□□□□ 0.23
MRPL38-207ENST00000477023 LOC105371045A0A1W2PR82 267 aa16.47■□□□□ 0.23
MRPL38-207ENST00000477023 HRCP23327 699 aa16.46■□□□□ 0.23
MRPL38-207ENST00000477023 SMARCA2P51531 1590 aa16.46■□□□□ 0.23
MRPL38-207ENST00000477023 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
MRPL38-207ENST00000477023 KCNA4P22459 653 aa16.36■□□□□ 0.21
MRPL38-207ENST00000477023 TRIM26Q12899 539 aaPredicted RBP16.36■□□□□ 0.21
MRPL38-207ENST00000477023 PPP4R3CPQ6ZMV5 832 aa16.34■□□□□ 0.21
MRPL38-207ENST00000477023 PCGF6Q9BYE7 350 aa16.34■□□□□ 0.21
MRPL38-207ENST00000477023 MSH5O43196 834 aa16.33■□□□□ 0.2
MRPL38-207ENST00000477023 EEA1Q15075 1411 aa16.29■□□□□ 0.2
MRPL38-207ENST00000477023 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
MRPL38-207ENST00000477023 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
MRPL38-207ENST00000477023 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
MRPL38-207ENST00000477023 BAZ1BQ9UIG0 1483 aaKnown RBP16.15■□□□□ 0.18
MRPL38-207ENST00000477023 FAM9AQ8IZU1 332 aaPredicted RBP16.14■□□□□ 0.17
MRPL38-207ENST00000477023 ZEB1P37275 1124 aaPredicted RBP16.11■□□□□ 0.17
MRPL38-207ENST00000477023 WRNQ14191 1432 aaPredicted RBP eCLIP16.1■□□□□ 0.17
MRPL38-207ENST00000477023 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
MRPL38-207ENST00000477023 TNIKQ9UKE5 1360 aa16.07■□□□□ 0.16
MRPL38-207ENST00000477023 NCAPD3P42695 1498 aa16.05■□□□□ 0.16
MRPL38-207ENST00000477023 NCBP3Q53F19 620 aaKnown RBP16.04■□□□□ 0.16
MRPL38-207ENST00000477023 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
MRPL38-207ENST00000477023 KIF21BO75037 1637 aa16■□□□□ 0.15
MRPL38-207ENST00000477023 GOLGA3Q08378 1498 aa15.99■□□□□ 0.15
MRPL38-207ENST00000477023 SOGA1O94964 1423 aa15.99■□□□□ 0.15
MRPL38-207ENST00000477023 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
MRPL38-207ENST00000477023 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
MRPL38-207ENST00000477023 CEP164Q9UPV0 1460 aa15.95■□□□□ 0.14
MRPL38-207ENST00000477023 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
MRPL38-207ENST00000477023 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
MRPL38-207ENST00000477023 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
MRPL38-207ENST00000477023 RUSC2Q8N2Y8 1516 aa15.87■□□□□ 0.13
MRPL38-207ENST00000477023 CNKSR2Q8WXI2 1034 aa15.83■□□□□ 0.12
MRPL38-207ENST00000477023 CFTRP13569 1480 aa15.83■□□□□ 0.12
MRPL38-207ENST00000477023 PRDM2Q13029 1718 aa15.82■□□□□ 0.12
MRPL38-207ENST00000477023 ERICH3Q5RHP9 1530 aa15.8■□□□□ 0.12
MRPL38-207ENST00000477023 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
MRPL38-207ENST00000477023 UBTFP17480 764 aaKnown RBP15.76■□□□□ 0.11
MRPL38-207ENST00000477023 PPARGC1BQ86YN6 1023 aaKnown RBP15.76■□□□□ 0.11
MRPL38-207ENST00000477023 EHMT2Q96KQ7 1210 aa15.75■□□□□ 0.11
MRPL38-207ENST00000477023 DNAJC5BQ9UF47 199 aa15.75■□□□□ 0.11
MRPL38-207ENST00000477023 PRXQ9BXM0 1461 aa15.71■□□□□ 0.11
MRPL38-207ENST00000477023 CLIP1P30622 1438 aa15.7■□□□□ 0.1
MRPL38-207ENST00000477023 VPS8Q8N3P4 1428 aa15.7■□□□□ 0.1
MRPL38-207ENST00000477023 CUX1P39880 1505 aa15.69■□□□□ 0.1
MRPL38-207ENST00000477023 MAPK8IP2Q13387 824 aaPredicted RBP15.68■□□□□ 0.1
MRPL38-207ENST00000477023 RAPGEF2Q9Y4G8 1499 aa15.67■□□□□ 0.1
MRPL38-207ENST00000477023 KIF27Q86VH2 1401 aa15.67■□□□□ 0.1
MRPL38-207ENST00000477023 SLC4A1APQ9BWU0 796 aaKnown RBP15.65■□□□□ 0.1
MRPL38-207ENST00000477023 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
MRPL38-207ENST00000477023 CC2D2AQ9P2K1 1620 aa15.56■□□□□ 0.08
MRPL38-207ENST00000477023 CCER1Q8TC90 406 aaPredicted RBP15.52■□□□□ 0.08
MRPL38-207ENST00000477023 APLP2Q06481 763 aa15.5■□□□□ 0.07
MRPL38-207ENST00000477023 ARAP1Q96P48 1450 aa15.48■□□□□ 0.07
MRPL38-207ENST00000477023 MAP3K1Q13233 1512 aa15.45■□□□□ 0.06
MRPL38-207ENST00000477023 DMRT2Q9Y5R5 561 aa15.45■□□□□ 0.06
MRPL38-207ENST00000477023 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
MRPL38-207ENST00000477023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
MRPL38-207ENST00000477023 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
MRPL38-207ENST00000477023 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
MRPL38-207ENST00000477023 IGF1RP08069 1367 aa15.43■□□□□ 0.06
MRPL38-207ENST00000477023 FANCD2Q9BXW9 1451 aa15.43■□□□□ 0.06
MRPL38-207ENST00000477023 CUX2O14529 1486 aa15.42■□□□□ 0.06
MRPL38-207ENST00000477023 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
MRPL38-207ENST00000477023 ARHGAP35Q9NRY4 1499 aa15.39■□□□□ 0.05
MRPL38-207ENST00000477023 ABCA10Q8WWZ4 1543 aa15.38■□□□□ 0.05
MRPL38-207ENST00000477023 CLSPNQ9HAW4 1339 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms