RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 NISCHQ9Y2I1 1504 aa43.39■■■■■ 4.54
CCS-201ENST00000310190 CCDC180Q9P1Z9 1646 aa38.61■■■■□ 3.77
CCS-201ENST00000310190 ABCC9O60706 1549 aa37.41■■■■□ 3.58
CCS-201ENST00000310190 NACADO15069 1562 aa36.27■■■■□ 3.4
CCS-201ENST00000310190 MYO15BQ96JP2 1530 aa36.24■■■■□ 3.39
CCS-201ENST00000310190 RB1CC1Q8TDY2 1594 aa36.22■■■■□ 3.39
CCS-201ENST00000310190 ZCCHC6Q5VYS8 1495 aaKnown RBP36.18■■■■□ 3.38
CCS-201ENST00000310190 DCAF1Q9Y4B6 1507 aa36.08■■■■□ 3.37
CCS-201ENST00000310190 DCAF8L2P0C7V8 631 aa35.84■■■■□ 3.33
CCS-201ENST00000310190 UNC13AQ9UPW8 1703 aa35.37■■■■□ 3.25
CCS-201ENST00000310190 BICRAQ9NZM4 1560 aa35.13■■■■□ 3.21
CCS-201ENST00000310190 SCRIBQ14160 1630 aa34.99■■■■□ 3.19
CCS-201ENST00000310190 SHROOM4Q9ULL8 1493 aa34.96■■■■□ 3.19
CCS-201ENST00000310190 PABPN1Q86U42 306 aaKnown RBP eCLIP34.92■■■■□ 3.182e-9■■□□□ 11.5
CCS-201ENST00000310190 DNAJC5BQ9UF47 199 aa34.3■■■■□ 3.08
CCS-201ENST00000310190 EIF4G1Q04637 1599 aaKnown RBP34.15■■■■□ 3.06
CCS-201ENST00000310190 CC2D2AQ9P2K1 1620 aa33.95■■■■□ 3.03
CCS-201ENST00000310190 CECR2Q9BXF3 1484 aa33.69■■■□□ 2.98
CCS-201ENST00000310190 SMARCA4P51532 1647 aa33.62■■■□□ 2.97
CCS-201ENST00000310190 BAZ1AQ9NRL2 1556 aaPredicted RBP33.62■■■□□ 2.97
CCS-201ENST00000310190 NCAPD3P42695 1498 aa33.48■■■□□ 2.95
CCS-201ENST00000310190 PEG3Q9GZU2 1588 aa33.44■■■□□ 2.94
CCS-201ENST00000310190 ATAD2BQ9ULI0 1458 aa33.43■■■□□ 2.94
CCS-201ENST00000310190 SMARCA2P51531 1590 aa33.43■■■□□ 2.94
CCS-201ENST00000310190 MROH2BQ7Z745 1585 aa33.36■■■□□ 2.93
CCS-201ENST00000310190 HMGXB3Q12766 1538 aa33.31■■■□□ 2.92
CCS-201ENST00000310190 BAZ1BQ9UIG0 1483 aaKnown RBP33.09■■■□□ 2.89
CCS-201ENST00000310190 RSF1Q96T23 1441 aaPredicted RBP33.06■■■□□ 2.88
CCS-201ENST00000310190 WIZO95785 1651 aa32.97■■■□□ 2.87
CCS-201ENST00000310190 TOP2AP11388 1531 aaKnown RBP32.72■■■□□ 2.83
CCS-201ENST00000310190 LAMC3Q9Y6N6 1575 aa32.54■■■□□ 2.8
CCS-201ENST00000310190 NESP48681 1621 aa32.43■■■□□ 2.78
CCS-201ENST00000310190 CADPSQ9ULU8 1353 aa32.43■■■□□ 2.78
CCS-201ENST00000310190 CFTRP13569 1480 aa32.3■■■□□ 2.76
CCS-201ENST00000310190 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
CCS-201ENST00000310190 PDS5BQ9NTI5 1447 aa32.27■■■□□ 2.76
CCS-201ENST00000310190 ERCC6Q03468 1493 aa32.24■■■□□ 2.75
CCS-201ENST00000310190 KIF21AQ7Z4S6 1674 aa32.1■■■□□ 2.73
CCS-201ENST00000310190 CUX2O14529 1486 aa32.07■■■□□ 2.72
CCS-201ENST00000310190 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
CCS-201ENST00000310190 THOC2Q8NI27 1593 aaKnown RBP32.04■■■□□ 2.72
CCS-201ENST00000310190 SUPT5HO00267 1087 aaKnown RBP32.01■■■□□ 2.71
CCS-201ENST00000310190 FANCD2Q9BXW9 1451 aa32■■■□□ 2.71
CCS-201ENST00000310190 CEP164Q9UPV0 1460 aa31.95■■■□□ 2.7
CCS-201ENST00000310190 MRC2Q9UBG0 1479 aa31.91■■■□□ 2.7
CCS-201ENST00000310190 WDR62O43379 1518 aa31.85■■■□□ 2.69
CCS-201ENST00000310190 URB2Q14146 1524 aaKnown RBP31.69■■■□□ 2.66
CCS-201ENST00000310190 ABCC8Q09428 1581 aa31.64■■■□□ 2.65
CCS-201ENST00000310190 DNMBPQ6XZF7 1577 aa31.52■■■□□ 2.64
CCS-201ENST00000310190 TOPBP1Q92547 1522 aa31.52■■■□□ 2.64
CCS-201ENST00000310190 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
CCS-201ENST00000310190 CUX1P39880 1505 aa31.3■■■□□ 2.6
CCS-201ENST00000310190 DNAJC5Q9H3Z4 198 aa31.3■■■□□ 2.6
CCS-201ENST00000310190 POLA1P09884 1462 aaPredicted RBP31.26■■■□□ 2.59
CCS-201ENST00000310190 TARBP1Q13395 1621 aaKnown RBP31.22■■■□□ 2.59
CCS-201ENST00000310190 FGD5Q6ZNL6 1462 aa31.15■■■□□ 2.58
CCS-201ENST00000310190 WRNQ14191 1432 aaPredicted RBP eCLIP31.13■■■□□ 2.57
CCS-201ENST00000310190 BIVM-ERCC5R4GMW8 1640 aa31.13■■■□□ 2.57
CCS-201ENST00000310190 TOP2BQ02880 1626 aa31.12■■■□□ 2.57
CCS-201ENST00000310190 WDR97A6NE52 1622 aa31.1■■■□□ 2.57
CCS-201ENST00000310190 SOGA1O94964 1423 aa31.1■■■□□ 2.57
CCS-201ENST00000310190 ZNF608Q9ULD9 1512 aaPredicted RBP31.08■■■□□ 2.57
CCS-201ENST00000310190 RAD54L2Q9Y4B4 1467 aa31.03■■■□□ 2.56
CCS-201ENST00000310190 SYNJ1O43426 1573 aa31.03■■■□□ 2.56
CCS-201ENST00000310190 EIF4G3O43432 1585 aaKnown RBP31■■■□□ 2.55
CCS-201ENST00000310190 ABCA10Q8WWZ4 1543 aa30.96■■■□□ 2.55
CCS-201ENST00000310190 AQRO60306 1485 aaKnown RBP eCLIP30.91■■■□□ 2.541e-16■■■■■ 45.5
CCS-201ENST00000310190 TDRD9Q8NDG6 1382 aaKnown RBP30.85■■■□□ 2.53
CCS-201ENST00000310190 ABCA5Q8WWZ7 1642 aa30.8■■■□□ 2.52
CCS-201ENST00000310190 GRIN2BQ13224 1484 aa30.77■■■□□ 2.52
CCS-201ENST00000310190 GAPVD1Q14C86 1478 aa30.76■■■□□ 2.52
CCS-201ENST00000310190 MAGI1Q96QZ7 1491 aaPredicted RBP30.73■■■□□ 2.51
CCS-201ENST00000310190 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
CCS-201ENST00000310190 OSCARQ8IYS5 282 aa30.66■■■□□ 2.5
CCS-201ENST00000310190 SNAPC4Q5SXM2 1469 aa30.63■■■□□ 2.49
CCS-201ENST00000310190 ERICH3Q5RHP9 1530 aa30.61■■■□□ 2.49
CCS-201ENST00000310190 SYNJ2O15056 1496 aa30.57■■■□□ 2.48
CCS-201ENST00000310190 CHD1O14646 1710 aa30.56■■■□□ 2.48
CCS-201ENST00000310190 KIF27Q86VH2 1401 aa30.49■■■□□ 2.47
CCS-201ENST00000310190 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
CCS-201ENST00000310190 FHAD1B1AJZ9 1412 aa30.45■■■□□ 2.46
CCS-201ENST00000310190 CHMP7Q8WUX9 453 aaPredicted RBP30.43■■■□□ 2.46
CCS-201ENST00000310190 IGF1RP08069 1367 aa30.39■■■□□ 2.45
CCS-201ENST00000310190 GRIN2AQ12879 1464 aa30.37■■■□□ 2.45
CCS-201ENST00000310190 FBLN2P98095 1184 aa30.36■■■□□ 2.45
CCS-201ENST00000310190 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
CCS-201ENST00000310190 CLASP1Q7Z460 1538 aa30.34■■■□□ 2.45
CCS-201ENST00000310190 CUL7Q14999 1698 aa30.32■■■□□ 2.44
CCS-201ENST00000310190 NUP160Q12769 1436 aa30.3■■■□□ 2.44
CCS-201ENST00000310190 CEP170Q5SW79 1584 aa30.18■■■□□ 2.42
CCS-201ENST00000310190 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
CCS-201ENST00000310190 CARMIL1Q5VZK9 1371 aa30.16■■■□□ 2.42
CCS-201ENST00000310190 RUSC2Q8N2Y8 1516 aa30.14■■■□□ 2.42
CCS-201ENST00000310190 RIMBP3CA6NJZ7 1639 aa30.14■■■□□ 2.41
CCS-201ENST00000310190 RIMBP3BA6NNM3 1639 aa30.14■■■□□ 2.41
CCS-201ENST00000310190 RIMBP3Q9UFD9 1639 aa30.14■■■□□ 2.41
CCS-201ENST00000310190 CHIC1Q5VXU3 224 aa30.1■■■□□ 2.41
CCS-201ENST00000310190 SHROOM2Q13796 1616 aa30.07■■■□□ 2.4
CCS-201ENST00000310190 EEA1Q15075 1411 aa30.05■■■□□ 2.4
CCS-201ENST00000310190 KIAA0586Q9BVV6 1533 aa30.01■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms