RNA–Protein interactions for RNA: ENST00000616804.5

CKLF-CMTM1-206, Transcript of CKLF-CMTM1 readthrough, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CKLF-CMTM1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-206ENST00000616804 AEBP2Q6ZN18 517 aaPredicted RBP25.33■■□□□ 1.65
CKLF-CMTM1-206ENST00000616804 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
CKLF-CMTM1-206ENST00000616804 SENP3Q9H4L4 574 aaPredicted RBP21.64■■□□□ 1.05
CKLF-CMTM1-206ENST00000616804 PHF23Q9BUL5 403 aaPredicted RBP21.43■■□□□ 1.02
CKLF-CMTM1-206ENST00000616804 FOXD1Q16676 465 aa20.06■□□□□ 0.8
CKLF-CMTM1-206ENST00000616804 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
CKLF-CMTM1-206ENST00000616804 PPP6R1Q9UPN7 881 aa19■□□□□ 0.63
CKLF-CMTM1-206ENST00000616804 ADRA2BP18089 450 aa18.99■□□□□ 0.63
CKLF-CMTM1-206ENST00000616804 PIAS4Q8N2W9 510 aaPredicted RBP18.88■□□□□ 0.61
CKLF-CMTM1-206ENST00000616804 MSH5O43196 834 aa18.71■□□□□ 0.59
CKLF-CMTM1-206ENST00000616804 POTEDQ86YR6 584 aa18.06■□□□□ 0.48
CKLF-CMTM1-206ENST00000616804 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
CKLF-CMTM1-206ENST00000616804 PPP4R3CPQ6ZMV5 832 aa17.33■□□□□ 0.36
CKLF-CMTM1-206ENST00000616804 MAPK8IP2Q13387 824 aaPredicted RBP17.31■□□□□ 0.36
CKLF-CMTM1-206ENST00000616804 DMRT2Q9Y5R5 561 aa17.19■□□□□ 0.34
CKLF-CMTM1-206ENST00000616804 CNKSR2Q8WXI2 1034 aa16.94■□□□□ 0.3
CKLF-CMTM1-206ENST00000616804 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
CKLF-CMTM1-206ENST00000616804 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
CKLF-CMTM1-206ENST00000616804 RNF216Q9NWF9 866 aaPredicted RBP16.69■□□□□ 0.26
CKLF-CMTM1-206ENST00000616804 KCNA4P22459 653 aa16.53■□□□□ 0.24
CKLF-CMTM1-206ENST00000616804 NPM3O75607 178 aaKnown RBP16.52■□□□□ 0.24
CKLF-CMTM1-206ENST00000616804 DCAF8L1A6NGE4 600 aa16.49■□□□□ 0.23
CKLF-CMTM1-206ENST00000616804 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
CKLF-CMTM1-206ENST00000616804 RNF39Q9H2S5 420 aa15.96■□□□□ 0.15
CKLF-CMTM1-206ENST00000616804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.14
CKLF-CMTM1-206ENST00000616804 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
CKLF-CMTM1-206ENST00000616804 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.12
CKLF-CMTM1-206ENST00000616804 SLC4A1APQ9BWU0 796 aaKnown RBP15.72■□□□□ 0.11
CKLF-CMTM1-206ENST00000616804 SLC4A2P04920 1241 aa15.66■□□□□ 0.1
CKLF-CMTM1-206ENST00000616804 U3KPZ7 1027 aaPredicted RBP15.61■□□□□ 0.09
CKLF-CMTM1-206ENST00000616804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
CKLF-CMTM1-206ENST00000616804 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
CKLF-CMTM1-206ENST00000616804 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
CKLF-CMTM1-206ENST00000616804 APLP2Q06481 763 aa15.33■□□□□ 0.04
CKLF-CMTM1-206ENST00000616804 MYCNP04198 464 aaPredicted RBP15.32■□□□□ 0.04
CKLF-CMTM1-206ENST00000616804 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
CKLF-CMTM1-206ENST00000616804 CAPN15O75808 1086 aa15.27■□□□□ 0.04
CKLF-CMTM1-206ENST00000616804 SPINK5Q9NQ38 1064 aaPredicted RBP15.26■□□□□ 0.03
CKLF-CMTM1-206ENST00000616804 ZBTB22O15209 634 aa15.17■□□□□ 0.02
CKLF-CMTM1-206ENST00000616804 NISCHQ9Y2I1 1504 aa15.15■□□□□ 0.02
CKLF-CMTM1-206ENST00000616804 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
CKLF-CMTM1-206ENST00000616804 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
CKLF-CMTM1-206ENST00000616804 DSG3P32926 999 aa15.05■□□□□ -0
CKLF-CMTM1-206ENST00000616804 ABCB7O75027 752 aa14.91□□□□□ -0.02
CKLF-CMTM1-206ENST00000616804 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
CKLF-CMTM1-206ENST00000616804 ATXN8OSP0DMR3 200 aa14.86□□□□□ -0.03
CKLF-CMTM1-206ENST00000616804 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
CKLF-CMTM1-206ENST00000616804 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
CKLF-CMTM1-206ENST00000616804 POLA2Q14181 598 aa14.77□□□□□ -0.05
CKLF-CMTM1-206ENST00000616804 ZBTB12Q9Y330 459 aaPredicted RBP14.57□□□□□ -0.08
CKLF-CMTM1-206ENST00000616804 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
CKLF-CMTM1-206ENST00000616804 FBLN2P98095 1184 aa14.36□□□□□ -0.11
CKLF-CMTM1-206ENST00000616804 OSCARQ8IYS5 282 aa14.29□□□□□ -0.12
CKLF-CMTM1-206ENST00000616804 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
CKLF-CMTM1-206ENST00000616804 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
CKLF-CMTM1-206ENST00000616804 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
CKLF-CMTM1-206ENST00000616804 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
CKLF-CMTM1-206ENST00000616804 SPDYE2Q495Y8 402 aa14.11□□□□□ -0.15
CKLF-CMTM1-206ENST00000616804 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
CKLF-CMTM1-206ENST00000616804 REM2Q8IYK8 340 aaPredicted RBP13.98□□□□□ -0.17
CKLF-CMTM1-206ENST00000616804 SSUH2Q9Y2M2 353 aa13.94□□□□□ -0.18
CKLF-CMTM1-206ENST00000616804 CHRDL2Q6WN34 429 aa13.92□□□□□ -0.18
CKLF-CMTM1-206ENST00000616804 POTEHQ6S545 545 aa13.87□□□□□ -0.19
CKLF-CMTM1-206ENST00000616804 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
CKLF-CMTM1-206ENST00000616804 ABCC9O60706 1549 aa13.81□□□□□ -0.2
CKLF-CMTM1-206ENST00000616804 PABPN1Q86U42 306 aaKnown RBP eCLIP13.79□□□□□ -0.2
CKLF-CMTM1-206ENST00000616804 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
CKLF-CMTM1-206ENST00000616804 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
CKLF-CMTM1-206ENST00000616804 CLEC11AQ9Y240 323 aa13.73□□□□□ -0.21
CKLF-CMTM1-206ENST00000616804 PIP4P2Q8N4L2 257 aa13.65□□□□□ -0.22
CKLF-CMTM1-206ENST00000616804 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
CKLF-CMTM1-206ENST00000616804 CCDC180Q9P1Z9 1646 aa13.61□□□□□ -0.23
CKLF-CMTM1-206ENST00000616804 PRR29P0C7W0 189 aa13.56□□□□□ -0.24
CKLF-CMTM1-206ENST00000616804 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
CKLF-CMTM1-206ENST00000616804 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
CKLF-CMTM1-206ENST00000616804 PROM2Q8N271 834 aa13.47□□□□□ -0.25
CKLF-CMTM1-206ENST00000616804 FKBP8Q14318 412 aa13.46□□□□□ -0.25
CKLF-CMTM1-206ENST00000616804 CHADLQ6NUI6 762 aa13.39□□□□□ -0.27
CKLF-CMTM1-206ENST00000616804 HAX1O00165 279 aa13.33□□□□□ -0.28
CKLF-CMTM1-206ENST00000616804 CREBZFQ9NS37 354 aa13.27□□□□□ -0.29
CKLF-CMTM1-206ENST00000616804 FARP1Q9Y4F1 1045 aaPredicted RBP13.26□□□□□ -0.29
CKLF-CMTM1-206ENST00000616804 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
CKLF-CMTM1-206ENST00000616804 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
CKLF-CMTM1-206ENST00000616804 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
CKLF-CMTM1-206ENST00000616804 FBXO3Q9UK99 471 aa13.13□□□□□ -0.31
CKLF-CMTM1-206ENST00000616804 NPM1P06748 294 aaKnown RBP eCLIP13.11□□□□□ -0.31
CKLF-CMTM1-206ENST00000616804 EVX2Q03828 476 aa13.11□□□□□ -0.31
CKLF-CMTM1-206ENST00000616804 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
CKLF-CMTM1-206ENST00000616804 MIER1Q8N108 512 aa13.1□□□□□ -0.31
CKLF-CMTM1-206ENST00000616804 MNX1P50219 401 aaPredicted RBP13.07□□□□□ -0.32
CKLF-CMTM1-206ENST00000616804 PLCD3Q8N3E9 789 aa13.07□□□□□ -0.32
CKLF-CMTM1-206ENST00000616804 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
CKLF-CMTM1-206ENST00000616804 RB1CC1Q8TDY2 1594 aa12.99□□□□□ -0.33
CKLF-CMTM1-206ENST00000616804 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
CKLF-CMTM1-206ENST00000616804 ZRANB1Q9UGI0 708 aa12.96□□□□□ -0.33
CKLF-CMTM1-206ENST00000616804 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
CKLF-CMTM1-206ENST00000616804 ZNF579Q8NAF0 562 aaKnown RBP12.91□□□□□ -0.34
CKLF-CMTM1-206ENST00000616804 GABBR2O75899 941 aa12.89□□□□□ -0.35
CKLF-CMTM1-206ENST00000616804 CLCN6P51797 869 aa12.89□□□□□ -0.35
CKLF-CMTM1-206ENST00000616804 UNC13AQ9UPW8 1703 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms