RNA–Protein interactions for RNA: ENST00000490277.1

TPT1-207, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 2

Gene TPT1, Length 1,851 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-207ENST00000490277 NISCHQ9Y2I1 1504 aa21.89■■□□□ 1.09
TPT1-207ENST00000490277 CCDC180Q9P1Z9 1646 aa19.55■□□□□ 0.72
TPT1-207ENST00000490277 ABCC9O60706 1549 aa19.42■□□□□ 0.7
TPT1-207ENST00000490277 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
TPT1-207ENST00000490277 DCAF8L2P0C7V8 631 aa18.51■□□□□ 0.55
TPT1-207ENST00000490277 NACADO15069 1562 aa18.48■□□□□ 0.55
TPT1-207ENST00000490277 MYO15BQ96JP2 1530 aa18.27■□□□□ 0.52
TPT1-207ENST00000490277 ZCCHC6Q5VYS8 1495 aaKnown RBP18.15■□□□□ 0.5
TPT1-207ENST00000490277 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.49
TPT1-207ENST00000490277 DCAF1Q9Y4B6 1507 aa18.09■□□□□ 0.49
TPT1-207ENST00000490277 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
TPT1-207ENST00000490277 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
TPT1-207ENST00000490277 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.47
TPT1-207ENST00000490277 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
TPT1-207ENST00000490277 SHROOM4Q9ULL8 1493 aa17.79■□□□□ 0.44
TPT1-207ENST00000490277 EIF4G1Q04637 1599 aaKnown RBP17.54■□□□□ 0.4
TPT1-207ENST00000490277 CC2D2AQ9P2K1 1620 aa17.53■□□□□ 0.4
TPT1-207ENST00000490277 CECR2Q9BXF3 1484 aa17.49■□□□□ 0.39
TPT1-207ENST00000490277 NCAPD3P42695 1498 aa17.06■□□□□ 0.32
TPT1-207ENST00000490277 SMARCA4P51532 1647 aa17.02■□□□□ 0.32
TPT1-207ENST00000490277 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.31
TPT1-207ENST00000490277 SMARCA2P51531 1590 aa16.99■□□□□ 0.31
TPT1-207ENST00000490277 BAZ1AQ9NRL2 1556 aaPredicted RBP16.99■□□□□ 0.31
TPT1-207ENST00000490277 HMGXB3Q12766 1538 aa16.93■□□□□ 0.3
TPT1-207ENST00000490277 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
TPT1-207ENST00000490277 PEG3Q9GZU2 1588 aa16.86■□□□□ 0.29
TPT1-207ENST00000490277 MROH2BQ7Z745 1585 aa16.84■□□□□ 0.29
TPT1-207ENST00000490277 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
TPT1-207ENST00000490277 NESP48681 1621 aa16.71■□□□□ 0.26
TPT1-207ENST00000490277 CUX2O14529 1486 aa16.69■□□□□ 0.26
TPT1-207ENST00000490277 WIZO95785 1651 aa16.64■□□□□ 0.25
TPT1-207ENST00000490277 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
TPT1-207ENST00000490277 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
TPT1-207ENST00000490277 RSF1Q96T23 1441 aaPredicted RBP16.58■□□□□ 0.24
TPT1-207ENST00000490277 CADPSQ9ULU8 1353 aa16.57■□□□□ 0.24
TPT1-207ENST00000490277 DNAJC5Q9H3Z4 198 aa16.53■□□□□ 0.24
TPT1-207ENST00000490277 THOC2Q8NI27 1593 aaKnown RBP16.48■□□□□ 0.23
TPT1-207ENST00000490277 KIF21AQ7Z4S6 1674 aa16.47■□□□□ 0.23
TPT1-207ENST00000490277 TOP2AP11388 1531 aaKnown RBP16.46■□□□□ 0.23
TPT1-207ENST00000490277 MRC2Q9UBG0 1479 aa16.39■□□□□ 0.21
TPT1-207ENST00000490277 CFTRP13569 1480 aa16.39■□□□□ 0.21
TPT1-207ENST00000490277 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
TPT1-207ENST00000490277 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
TPT1-207ENST00000490277 WDR62O43379 1518 aa16.32■□□□□ 0.2
TPT1-207ENST00000490277 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
TPT1-207ENST00000490277 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
TPT1-207ENST00000490277 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
TPT1-207ENST00000490277 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
TPT1-207ENST00000490277 TOPBP1Q92547 1522 aa16.06■□□□□ 0.16
TPT1-207ENST00000490277 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
TPT1-207ENST00000490277 SUPT5HO00267 1087 aaKnown RBP16.03■□□□□ 0.16
TPT1-207ENST00000490277 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
TPT1-207ENST00000490277 DNMBPQ6XZF7 1577 aa16.01■□□□□ 0.15
TPT1-207ENST00000490277 ZNF608Q9ULD9 1512 aaPredicted RBP15.96■□□□□ 0.15
TPT1-207ENST00000490277 POLA1P09884 1462 aaPredicted RBP15.89■□□□□ 0.13
TPT1-207ENST00000490277 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
TPT1-207ENST00000490277 SOGA1O94964 1423 aa15.87■□□□□ 0.13
TPT1-207ENST00000490277 TARBP1Q13395 1621 aaKnown RBP15.87■□□□□ 0.13
TPT1-207ENST00000490277 EIF4G3O43432 1585 aaKnown RBP15.86■□□□□ 0.13
TPT1-207ENST00000490277 AQRO60306 1485 aaKnown RBP eCLIP15.86■□□□□ 0.135e-9■■■■■ 28.2
TPT1-207ENST00000490277 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
TPT1-207ENST00000490277 FGD5Q6ZNL6 1462 aa15.82■□□□□ 0.12
TPT1-207ENST00000490277 CUX1P39880 1505 aa15.82■□□□□ 0.12
TPT1-207ENST00000490277 TDRD9Q8NDG6 1382 aaKnown RBP15.81■□□□□ 0.12
TPT1-207ENST00000490277 FBLN2P98095 1184 aa15.8■□□□□ 0.12
TPT1-207ENST00000490277 WDR97A6NE52 1622 aa15.76■□□□□ 0.11
TPT1-207ENST00000490277 CHD1O14646 1710 aa15.71■□□□□ 0.11
TPT1-207ENST00000490277 CHMP7Q8WUX9 453 aaPredicted RBP15.71■□□□□ 0.11
TPT1-207ENST00000490277 GRIN2BQ13224 1484 aa15.7■□□□□ 0.1
TPT1-207ENST00000490277 SNAPC4Q5SXM2 1469 aa15.69■□□□□ 0.1
TPT1-207ENST00000490277 RIMBP3CA6NJZ7 1639 aa15.69■□□□□ 0.1
TPT1-207ENST00000490277 RIMBP3BA6NNM3 1639 aa15.69■□□□□ 0.1
TPT1-207ENST00000490277 RIMBP3Q9UFD9 1639 aa15.69■□□□□ 0.1
TPT1-207ENST00000490277 MAGI1Q96QZ7 1491 aaPredicted RBP15.68■□□□□ 0.1
TPT1-207ENST00000490277 ARHGEF11O15085 1522 aa15.67■□□□□ 0.1
TPT1-207ENST00000490277 WRNQ14191 1432 aaPredicted RBP eCLIP15.67■□□□□ 0.1
TPT1-207ENST00000490277 GAPVD1Q14C86 1478 aa15.66■□□□□ 0.1
TPT1-207ENST00000490277 ABCA10Q8WWZ4 1543 aa15.66■□□□□ 0.1
TPT1-207ENST00000490277 SYNJ2O15056 1496 aa15.63■□□□□ 0.09
TPT1-207ENST00000490277 CYB5RLQ6IPT4 315 aa15.62■□□□□ 0.09
TPT1-207ENST00000490277 TOP2BQ02880 1626 aa15.62■□□□□ 0.09
TPT1-207ENST00000490277 BIVM-ERCC5R4GMW8 1640 aa15.6■□□□□ 0.09
TPT1-207ENST00000490277 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
TPT1-207ENST00000490277 PBRM1Q86U86 1689 aa15.59■□□□□ 0.09
TPT1-207ENST00000490277 ABCA5Q8WWZ7 1642 aa15.58■□□□□ 0.09
TPT1-207ENST00000490277 CLASP1Q7Z460 1538 aa15.54■□□□□ 0.08
TPT1-207ENST00000490277 ARAP1Q96P48 1450 aa15.52■□□□□ 0.07
TPT1-207ENST00000490277 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
TPT1-207ENST00000490277 GRIN2AQ12879 1464 aa15.48■□□□□ 0.07
TPT1-207ENST00000490277 ERICH3Q5RHP9 1530 aa15.47■□□□□ 0.07
TPT1-207ENST00000490277 ADAMTS12P58397 1594 aa15.46■□□□□ 0.07
TPT1-207ENST00000490277 NUP160Q12769 1436 aa15.42■□□□□ 0.06
TPT1-207ENST00000490277 TRHP20396 242 aaPredicted RBP15.42■□□□□ 0.06
TPT1-207ENST00000490277 CEP170Q5SW79 1584 aa15.39■□□□□ 0.05
TPT1-207ENST00000490277 KIF27Q86VH2 1401 aa15.37■□□□□ 0.05
TPT1-207ENST00000490277 IGF1RP08069 1367 aa15.33■□□□□ 0.05
TPT1-207ENST00000490277 JPH4Q96JJ6 628 aa15.33■□□□□ 0.04
TPT1-207ENST00000490277 SHROOM2Q13796 1616 aa15.3■□□□□ 0.04
TPT1-207ENST00000490277 ERCC6L2Q5T890 1561 aa15.3■□□□□ 0.04
TPT1-207ENST00000490277 PRG4Q92954 1404 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms