RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 NISCHQ9Y2I1 1504 aa49.95■■■■■ 5.59
CKLF-201ENST00000264001 CCDC180Q9P1Z9 1646 aa44.75■■■■■ 4.75
CKLF-201ENST00000264001 ABCC9O60706 1549 aa44.44■■■■■ 4.7
CKLF-201ENST00000264001 RB1CC1Q8TDY2 1594 aa42.46■■■■■ 4.39
CKLF-201ENST00000264001 NACADO15069 1562 aa42.18■■■■■ 4.34
CKLF-201ENST00000264001 DCAF8L2P0C7V8 631 aa41.97■■■■■ 4.31
CKLF-201ENST00000264001 MYO15BQ96JP2 1530 aa41.64■■■■■ 4.26
CKLF-201ENST00000264001 UNC13AQ9UPW8 1703 aa41.62■■■■■ 4.25
CKLF-201ENST00000264001 ZCCHC6Q5VYS8 1495 aaKnown RBP41.49■■■■■ 4.23
CKLF-201ENST00000264001 DNAJC5BQ9UF47 199 aa41.42■■■■■ 4.22
CKLF-201ENST00000264001 DCAF1Q9Y4B6 1507 aa41.28■■■■■ 4.2
CKLF-201ENST00000264001 PABPN1Q86U42 306 aaKnown RBP eCLIP41.23■■■■■ 4.19
CKLF-201ENST00000264001 BICRAQ9NZM4 1560 aa41.17■■■■■ 4.18
CKLF-201ENST00000264001 SHROOM4Q9ULL8 1493 aa40.73■■■■■ 4.11
CKLF-201ENST00000264001 SCRIBQ14160 1630 aa40.71■■■■■ 4.11
CKLF-201ENST00000264001 CC2D2AQ9P2K1 1620 aa40.24■■■■■ 4.03
CKLF-201ENST00000264001 EIF4G1Q04637 1599 aaKnown RBP40.18■■■■■ 4.02
CKLF-201ENST00000264001 CECR2Q9BXF3 1484 aa40.05■■■■■ 4
CKLF-201ENST00000264001 SMARCA4P51532 1647 aa38.89■■■■□ 3.82
CKLF-201ENST00000264001 NCAPD3P42695 1498 aa38.84■■■■□ 3.81
CKLF-201ENST00000264001 ATAD2BQ9ULI0 1458 aa38.79■■■■□ 3.8
CKLF-201ENST00000264001 BAZ1AQ9NRL2 1556 aaPredicted RBP38.74■■■■□ 3.79
CKLF-201ENST00000264001 SMARCA2P51531 1590 aa38.73■■■■□ 3.79
CKLF-201ENST00000264001 HMGXB3Q12766 1538 aa38.68■■■■□ 3.78
CKLF-201ENST00000264001 MROH2BQ7Z745 1585 aa38.5■■■■□ 3.75
CKLF-201ENST00000264001 PEG3Q9GZU2 1588 aa38.49■■■■□ 3.75
CKLF-201ENST00000264001 BAZ1BQ9UIG0 1483 aaKnown RBP38.45■■■■□ 3.75
CKLF-201ENST00000264001 ERCC6Q03468 1493 aa38.42■■■■□ 3.74
CKLF-201ENST00000264001 CUX2O14529 1486 aa38.37■■■■□ 3.73
CKLF-201ENST00000264001 NESP48681 1621 aa38.19■■■■□ 3.7
CKLF-201ENST00000264001 WIZO95785 1651 aa38.08■■■■□ 3.69
CKLF-201ENST00000264001 LAMC3Q9Y6N6 1575 aa38.07■■■■□ 3.69
CKLF-201ENST00000264001 DNAJC5Q9H3Z4 198 aa38.05■■■■□ 3.68
CKLF-201ENST00000264001 THOC2Q8NI27 1593 aaKnown RBP37.96■■■■□ 3.67
CKLF-201ENST00000264001 KIF21AQ7Z4S6 1674 aa37.88■■■■□ 3.65
CKLF-201ENST00000264001 RSF1Q96T23 1441 aaPredicted RBP37.86■■■■□ 3.65
CKLF-201ENST00000264001 PDS5BQ9NTI5 1447 aa37.74■■■■□ 3.63
CKLF-201ENST00000264001 CADPSQ9ULU8 1353 aa37.68■■■■□ 3.62
CKLF-201ENST00000264001 TOP2AP11388 1531 aaKnown RBP37.61■■■■□ 3.61
CKLF-201ENST00000264001 MRC2Q9UBG0 1479 aa37.46■■■■□ 3.59
CKLF-201ENST00000264001 WDR62O43379 1518 aa37.41■■■■□ 3.58
CKLF-201ENST00000264001 CFTRP13569 1480 aa37.35■■■■□ 3.57
CKLF-201ENST00000264001 CEP164Q9UPV0 1460 aa37.34■■■■□ 3.57
CKLF-201ENST00000264001 FANCD2Q9BXW9 1451 aa37.26■■■■□ 3.56
CKLF-201ENST00000264001 PRDM2Q13029 1718 aa37.19■■■■□ 3.54
CKLF-201ENST00000264001 CCDC88BA6NC98 1476 aa37.18■■■■□ 3.54
CKLF-201ENST00000264001 URB2Q14146 1524 aaKnown RBP36.94■■■■□ 3.5
CKLF-201ENST00000264001 TOPBP1Q92547 1522 aa36.61■■■■□ 3.45
CKLF-201ENST00000264001 ABCC8Q09428 1581 aa36.56■■■■□ 3.44
CKLF-201ENST00000264001 IFT140Q96RY7 1462 aa36.56■■■■□ 3.44
CKLF-201ENST00000264001 DNMBPQ6XZF7 1577 aa36.53■■■■□ 3.44
CKLF-201ENST00000264001 SUPT5HO00267 1087 aaKnown RBP36.52■■■■□ 3.44
CKLF-201ENST00000264001 ZNF608Q9ULD9 1512 aaPredicted RBP36.44■■■■□ 3.42
CKLF-201ENST00000264001 OSCARQ8IYS5 282 aa36.43■■■■□ 3.42
CKLF-201ENST00000264001 TRIM41Q8WV44 630 aa36.42■■■■□ 3.42
CKLF-201ENST00000264001 EIF4G3O43432 1585 aaKnown RBP36.4■■■■□ 3.42
CKLF-201ENST00000264001 TARBP1Q13395 1621 aaKnown RBP36.3■■■■□ 3.4
CKLF-201ENST00000264001 POLA1P09884 1462 aaPredicted RBP36.27■■■■□ 3.4
CKLF-201ENST00000264001 RIMBP3CA6NJZ7 1639 aa36.16■■■■□ 3.38
CKLF-201ENST00000264001 RIMBP3BA6NNM3 1639 aa36.16■■■■□ 3.38
CKLF-201ENST00000264001 RIMBP3Q9UFD9 1639 aa36.16■■■■□ 3.38
CKLF-201ENST00000264001 CHD1O14646 1710 aa36.16■■■■□ 3.38
CKLF-201ENST00000264001 CUX1P39880 1505 aa36.15■■■■□ 3.38
CKLF-201ENST00000264001 AQRO60306 1485 aaKnown RBP eCLIP36.13■■■■□ 3.37
CKLF-201ENST00000264001 RAD54L2Q9Y4B4 1467 aa36.13■■■■□ 3.37
CKLF-201ENST00000264001 FGD5Q6ZNL6 1462 aa36.11■■■■□ 3.37
CKLF-201ENST00000264001 SOGA1O94964 1423 aa36.1■■■■□ 3.37
CKLF-201ENST00000264001 WDR97A6NE52 1622 aa36.04■■■■□ 3.36
CKLF-201ENST00000264001 ARHGEF11O15085 1522 aa36.02■■■■□ 3.36
CKLF-201ENST00000264001 TDRD9Q8NDG6 1382 aaKnown RBP35.97■■■■□ 3.35
CKLF-201ENST00000264001 SNAPC4Q5SXM2 1469 aa35.81■■■■□ 3.32
CKLF-201ENST00000264001 FBLN2P98095 1184 aa35.8■■■■□ 3.32
CKLF-201ENST00000264001 PBRM1Q86U86 1689 aa35.76■■■■□ 3.32
CKLF-201ENST00000264001 MAGI1Q96QZ7 1491 aaPredicted RBP35.75■■■■□ 3.31
CKLF-201ENST00000264001 GRIN2BQ13224 1484 aa35.74■■■■□ 3.31
CKLF-201ENST00000264001 ABCA10Q8WWZ4 1543 aa35.72■■■■□ 3.31
CKLF-201ENST00000264001 WRNQ14191 1432 aaPredicted RBP eCLIP35.71■■■■□ 3.31
CKLF-201ENST00000264001 BIVM-ERCC5R4GMW8 1640 aa35.7■■■■□ 3.31
CKLF-201ENST00000264001 TOP2BQ02880 1626 aa35.69■■■■□ 3.3
CKLF-201ENST00000264001 GAPVD1Q14C86 1478 aa35.68■■■■□ 3.3
CKLF-201ENST00000264001 SYNJ1O43426 1573 aa35.68■■■■□ 3.3
CKLF-201ENST00000264001 CLASP1Q7Z460 1538 aa35.66■■■■□ 3.3
CKLF-201ENST00000264001 ARAP1Q96P48 1450 aa35.65■■■■□ 3.3
CKLF-201ENST00000264001 ABCA5Q8WWZ7 1642 aa35.64■■■■□ 3.3
CKLF-201ENST00000264001 CHMP7Q8WUX9 453 aaPredicted RBP35.61■■■■□ 3.29
CKLF-201ENST00000264001 SYNJ2O15056 1496 aa35.6■■■■□ 3.29
CKLF-201ENST00000264001 CYB5RLQ6IPT4 315 aa35.55■■■■□ 3.28
CKLF-201ENST00000264001 ADAMTS12P58397 1594 aa35.36■■■■□ 3.25
CKLF-201ENST00000264001 GRIN2AQ12879 1464 aa35.29■■■■□ 3.24
CKLF-201ENST00000264001 ERICH3Q5RHP9 1530 aa35.28■■■■□ 3.24
CKLF-201ENST00000264001 FHAD1B1AJZ9 1412 aa35.23■■■■□ 3.23
CKLF-201ENST00000264001 CEP170Q5SW79 1584 aa35.17■■■■□ 3.22
CKLF-201ENST00000264001 TRHP20396 242 aaPredicted RBP35.16■■■■□ 3.22
CKLF-201ENST00000264001 NUP160Q12769 1436 aa35.15■■■■□ 3.22
CKLF-201ENST00000264001 SHROOM2Q13796 1616 aa35.07■■■■□ 3.21
CKLF-201ENST00000264001 ERCC6L2Q5T890 1561 aa35.04■■■■□ 3.2
CKLF-201ENST00000264001 KIF27Q86VH2 1401 aa35■■■■□ 3.19
CKLF-201ENST00000264001 IGF1RP08069 1367 aa34.93■■■■□ 3.18
CKLF-201ENST00000264001 RUSC2Q8N2Y8 1516 aa34.87■■■■□ 3.17
CKLF-201ENST00000264001 CUL7Q14999 1698 aa34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms