RNA–Protein interactions for RNA: ENST00000530705.5

TPT1-212, Transcript of tumor protein, translationally-controlled 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPT1, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-212ENST00000530705 DCAF8L2P0C7V8 631 aa21.82■■□□□ 1.08
TPT1-212ENST00000530705 NISCHQ9Y2I1 1504 aa21.13■□□□□ 0.97
TPT1-212ENST00000530705 SUPT5HO00267 1087 aaKnown RBP19.85■□□□□ 0.77
TPT1-212ENST00000530705 FAM9AQ8IZU1 332 aaPredicted RBP19.82■□□□□ 0.76
TPT1-212ENST00000530705 SHROOM4Q9ULL8 1493 aa19.64■□□□□ 0.73
TPT1-212ENST00000530705 APLP2Q06481 763 aa19.25■□□□□ 0.67
TPT1-212ENST00000530705 EHMT2Q96KQ7 1210 aa18.89■□□□□ 0.61
TPT1-212ENST00000530705 ABCC9O60706 1549 aa18.78■□□□□ 0.6
TPT1-212ENST00000530705 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
TPT1-212ENST00000530705 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
TPT1-212ENST00000530705 RANGAP1P46060 587 aaPredicted RBP18.51■□□□□ 0.55
TPT1-212ENST00000530705 UBTFP17480 764 aaKnown RBP18.5■□□□□ 0.55
TPT1-212ENST00000530705 PABPN1Q86U42 306 aaKnown RBP eCLIP18.47■□□□□ 0.55
TPT1-212ENST00000530705 MYT1LQ9UL68 1186 aa18.37■□□□□ 0.53
TPT1-212ENST00000530705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.34■□□□□ 0.53
TPT1-212ENST00000530705 HNRNPUL2Q1KMD3 747 aaKnown RBP18.34■□□□□ 0.53
TPT1-212ENST00000530705 TTBK1Q5TCY1 1321 aaPredicted RBP18.19■□□□□ 0.5
TPT1-212ENST00000530705 FBLN2P98095 1184 aa17.98■□□□□ 0.47
TPT1-212ENST00000530705 PELP1Q8IZL8 1130 aaKnown RBP17.93■□□□□ 0.46
TPT1-212ENST00000530705 PCGF6Q9BYE7 350 aa17.79■□□□□ 0.44
TPT1-212ENST00000530705 NPM1P06748 294 aaKnown RBP eCLIP17.75■□□□□ 0.43
TPT1-212ENST00000530705 CCER1Q8TC90 406 aaPredicted RBP17.72■□□□□ 0.43
TPT1-212ENST00000530705 RB1CC1Q8TDY2 1594 aa17.66■□□□□ 0.42
TPT1-212ENST00000530705 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
TPT1-212ENST00000530705 SCRIBQ14160 1630 aa17.66■□□□□ 0.42
TPT1-212ENST00000530705 CCDC180Q9P1Z9 1646 aa17.64■□□□□ 0.41
TPT1-212ENST00000530705 CHIC1Q5VXU3 224 aa17.63■□□□□ 0.41
TPT1-212ENST00000530705 ITGAEP38570 1179 aa17.59■□□□□ 0.41
TPT1-212ENST00000530705 ESF1Q9H501 851 aaKnown RBP17.59■□□□□ 0.41
TPT1-212ENST00000530705 CDK11AQ9UQ88 783 aaPredicted RBP17.56■□□□□ 0.4
TPT1-212ENST00000530705 NACADO15069 1562 aa17.42■□□□□ 0.38
TPT1-212ENST00000530705 FAM50AQ14320 339 aaKnown RBP17.38■□□□□ 0.37
TPT1-212ENST00000530705 SLC4A1APQ9BWU0 796 aaKnown RBP17.38■□□□□ 0.37
TPT1-212ENST00000530705 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
TPT1-212ENST00000530705 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
TPT1-212ENST00000530705 BCANQ96GW7 911 aa17.35■□□□□ 0.37
TPT1-212ENST00000530705 POLR3GLQ9BT43 218 aa17.34■□□□□ 0.37
TPT1-212ENST00000530705 TRIM52Q96A61 297 aa17.33■□□□□ 0.36
TPT1-212ENST00000530705 PPARGC1BQ86YN6 1023 aaKnown RBP17.32■□□□□ 0.36
TPT1-212ENST00000530705 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
TPT1-212ENST00000530705 ERCC6Q03468 1493 aa17.25■□□□□ 0.35
TPT1-212ENST00000530705 TRIM26Q12899 539 aaPredicted RBP17.21■□□□□ 0.35
TPT1-212ENST00000530705 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
TPT1-212ENST00000530705 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
TPT1-212ENST00000530705 P3H3Q8IVL6 736 aa17.19■□□□□ 0.34
TPT1-212ENST00000530705 NEFLP07196 543 aa17.18■□□□□ 0.34
TPT1-212ENST00000530705 ZNF777Q9ULD5 760 aaPredicted RBP17.17■□□□□ 0.34
TPT1-212ENST00000530705 ARID3CA6NKF2 412 aa17.15■□□□□ 0.34
TPT1-212ENST00000530705 LOC105371045A0A1W2PR82 267 aa17.12■□□□□ 0.33
TPT1-212ENST00000530705 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
TPT1-212ENST00000530705 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
TPT1-212ENST00000530705 TSPY4P0CV99 314 aa16.99■□□□□ 0.31
TPT1-212ENST00000530705 TSPY10P0CW01 314 aa16.99■□□□□ 0.31
TPT1-212ENST00000530705 NEFMP07197 916 aa16.98■□□□□ 0.31
TPT1-212ENST00000530705 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.31
TPT1-212ENST00000530705 ZNF326Q5BKZ1 582 aaKnown RBP16.95■□□□□ 0.3
TPT1-212ENST00000530705 CHGAP10645 457 aaKnown RBP16.95■□□□□ 0.3
TPT1-212ENST00000530705 PLEKHD1A6NEE1 506 aa16.93■□□□□ 0.3
TPT1-212ENST00000530705 CNGB1Q14028 1251 aaPredicted RBP16.88■□□□□ 0.29
TPT1-212ENST00000530705 ARID4BQ4LE39 1312 aaPredicted RBP16.88■□□□□ 0.29
TPT1-212ENST00000530705 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
TPT1-212ENST00000530705 ERICH6Q7L0X2 663 aa16.86■□□□□ 0.29
TPT1-212ENST00000530705 KCNH8Q96L42 1107 aa16.84■□□□□ 0.29
TPT1-212ENST00000530705 DCAF1Q9Y4B6 1507 aa16.83■□□□□ 0.28
TPT1-212ENST00000530705 NEUROD1Q13562 356 aa16.83■□□□□ 0.28
TPT1-212ENST00000530705 BAZ1AQ9NRL2 1556 aaPredicted RBP16.82■□□□□ 0.28
TPT1-212ENST00000530705 HRCP23327 699 aa16.81■□□□□ 0.28
TPT1-212ENST00000530705 MTUS2Q5JR59 1369 aa16.8■□□□□ 0.28
TPT1-212ENST00000530705 ACIN1Q9UKV3 1341 aaKnown RBP16.77■□□□□ 0.28
TPT1-212ENST00000530705 SLC24A1O60721 1099 aa16.77■□□□□ 0.28
TPT1-212ENST00000530705 KIF27Q86VH2 1401 aa16.75■□□□□ 0.27
TPT1-212ENST00000530705 PPP1R15AO75807 674 aaPredicted RBP16.74■□□□□ 0.27
TPT1-212ENST00000530705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.27
TPT1-212ENST00000530705 RSF1Q96T23 1441 aaPredicted RBP16.72■□□□□ 0.27
TPT1-212ENST00000530705 EEA1Q15075 1411 aa16.72■□□□□ 0.27
TPT1-212ENST00000530705 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
TPT1-212ENST00000530705 MYT1Q01538 1121 aa16.71■□□□□ 0.26
TPT1-212ENST00000530705 C14orf37Q86TY3 774 aa16.7■□□□□ 0.26
TPT1-212ENST00000530705 CECR2Q9BXF3 1484 aa16.69■□□□□ 0.26
TPT1-212ENST00000530705 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
TPT1-212ENST00000530705 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
TPT1-212ENST00000530705 DAXXQ9UER7 740 aaPredicted RBP16.68■□□□□ 0.26
TPT1-212ENST00000530705 YTHDC1Q96MU7 727 aaKnown RBP16.65■□□□□ 0.26
TPT1-212ENST00000530705 MYO15BQ96JP2 1530 aa16.59■□□□□ 0.25
TPT1-212ENST00000530705 SCAF1Q9H7N4 1312 aaKnown RBP16.59■□□□□ 0.25
TPT1-212ENST00000530705 CFDP1Q9UEE9 299 aaPredicted RBP16.58■□□□□ 0.25
TPT1-212ENST00000530705 CARMIL2Q6F5E8 1435 aa16.58■□□□□ 0.24
TPT1-212ENST00000530705 HDGFP51858 240 aaKnown RBP16.57■□□□□ 0.24
TPT1-212ENST00000530705 HAP1P54257 671 aaPredicted RBP16.57■□□□□ 0.24
TPT1-212ENST00000530705 NPM2Q86SE8 214 aaKnown RBP16.56■□□□□ 0.24
TPT1-212ENST00000530705 CHIC2Q9UKJ5 165 aa16.55■□□□□ 0.24
TPT1-212ENST00000530705 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
TPT1-212ENST00000530705 ANP32CO43423 234 aa16.53■□□□□ 0.24
TPT1-212ENST00000530705 TONSLQ96HA7 1378 aa16.52■□□□□ 0.24
TPT1-212ENST00000530705 CLIP1P30622 1438 aa16.5■□□□□ 0.23
TPT1-212ENST00000530705 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
TPT1-212ENST00000530705 CADPSQ9ULU8 1353 aa16.48■□□□□ 0.23
TPT1-212ENST00000530705 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
TPT1-212ENST00000530705 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
TPT1-212ENST00000530705 CUX2O14529 1486 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms