RNA–Protein interactions for RNA: ENST00000532838.1

CKLF-CMTM1-204, Transcript of CKLF-CMTM1 readthrough, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF-CMTM1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-204ENST00000532838 NISCHQ9Y2I1 1504 aa48.85■■■■■ 5.41
CKLF-CMTM1-204ENST00000532838 CCDC180Q9P1Z9 1646 aa43.52■■■■■ 4.56
CKLF-CMTM1-204ENST00000532838 ABCC9O60706 1549 aa42.6■■■■■ 4.41
CKLF-CMTM1-204ENST00000532838 RB1CC1Q8TDY2 1594 aa41.02■■■■■ 4.16
CKLF-CMTM1-204ENST00000532838 DCAF8L2P0C7V8 631 aa40.98■■■■■ 4.15
CKLF-CMTM1-204ENST00000532838 NACADO15069 1562 aa40.93■■■■■ 4.14
CKLF-CMTM1-204ENST00000532838 ZCCHC6Q5VYS8 1495 aaKnown RBP40.68■■■■■ 4.1
CKLF-CMTM1-204ENST00000532838 MYO15BQ96JP2 1530 aa40.64■■■■■ 4.1
CKLF-CMTM1-204ENST00000532838 DCAF1Q9Y4B6 1507 aa40.43■■■■■ 4.06
CKLF-CMTM1-204ENST00000532838 UNC13AQ9UPW8 1703 aa39.98■■■■□ 3.99
CKLF-CMTM1-204ENST00000532838 PABPN1Q86U42 306 aaKnown RBP eCLIP39.78■■■■□ 3.96
CKLF-CMTM1-204ENST00000532838 SCRIBQ14160 1630 aa39.69■■■■□ 3.94
CKLF-CMTM1-204ENST00000532838 BICRAQ9NZM4 1560 aa39.62■■■■□ 3.93
CKLF-CMTM1-204ENST00000532838 SHROOM4Q9ULL8 1493 aa39.36■■■■□ 3.89
CKLF-CMTM1-204ENST00000532838 DNAJC5BQ9UF47 199 aa39■■■■□ 3.83
CKLF-CMTM1-204ENST00000532838 EIF4G1Q04637 1599 aaKnown RBP38.67■■■■□ 3.78
CKLF-CMTM1-204ENST00000532838 CC2D2AQ9P2K1 1620 aa38.52■■■■□ 3.76
CKLF-CMTM1-204ENST00000532838 CECR2Q9BXF3 1484 aa38.3■■■■□ 3.72
CKLF-CMTM1-204ENST00000532838 SMARCA4P51532 1647 aa37.94■■■■□ 3.66
CKLF-CMTM1-204ENST00000532838 BAZ1AQ9NRL2 1556 aaPredicted RBP37.93■■■■□ 3.66
CKLF-CMTM1-204ENST00000532838 SMARCA2P51531 1590 aa37.76■■■■□ 3.64
CKLF-CMTM1-204ENST00000532838 ATAD2BQ9ULI0 1458 aa37.72■■■■□ 3.63
CKLF-CMTM1-204ENST00000532838 NCAPD3P42695 1498 aa37.71■■■■□ 3.63
CKLF-CMTM1-204ENST00000532838 MROH2BQ7Z745 1585 aa37.61■■■■□ 3.61
CKLF-CMTM1-204ENST00000532838 HMGXB3Q12766 1538 aa37.56■■■■□ 3.6
CKLF-CMTM1-204ENST00000532838 PEG3Q9GZU2 1588 aa37.55■■■■□ 3.6
CKLF-CMTM1-204ENST00000532838 BAZ1BQ9UIG0 1483 aaKnown RBP37.5■■■■□ 3.59
CKLF-CMTM1-204ENST00000532838 WIZO95785 1651 aa37.23■■■■□ 3.55
CKLF-CMTM1-204ENST00000532838 RSF1Q96T23 1441 aaPredicted RBP37.18■■■■□ 3.54
CKLF-CMTM1-204ENST00000532838 TOP2AP11388 1531 aaKnown RBP36.87■■■■□ 3.49
CKLF-CMTM1-204ENST00000532838 ERCC6Q03468 1493 aa36.83■■■■□ 3.49
CKLF-CMTM1-204ENST00000532838 LAMC3Q9Y6N6 1575 aa36.79■■■■□ 3.48
CKLF-CMTM1-204ENST00000532838 NESP48681 1621 aa36.79■■■■□ 3.48
CKLF-CMTM1-204ENST00000532838 CADPSQ9ULU8 1353 aa36.65■■■■□ 3.46
CKLF-CMTM1-204ENST00000532838 PDS5BQ9NTI5 1447 aa36.59■■■■□ 3.45
CKLF-CMTM1-204ENST00000532838 KIF21AQ7Z4S6 1674 aa36.41■■■■□ 3.42
CKLF-CMTM1-204ENST00000532838 CCDC88BA6NC98 1476 aa36.4■■■■□ 3.42
CKLF-CMTM1-204ENST00000532838 CUX2O14529 1486 aa36.4■■■■□ 3.42
CKLF-CMTM1-204ENST00000532838 CFTRP13569 1480 aa36.39■■■■□ 3.42
CKLF-CMTM1-204ENST00000532838 SUPT5HO00267 1087 aaKnown RBP36.31■■■■□ 3.4
CKLF-CMTM1-204ENST00000532838 THOC2Q8NI27 1593 aaKnown RBP36.27■■■■□ 3.4
CKLF-CMTM1-204ENST00000532838 FANCD2Q9BXW9 1451 aa36.24■■■■□ 3.39
CKLF-CMTM1-204ENST00000532838 CEP164Q9UPV0 1460 aa36.24■■■■□ 3.39
CKLF-CMTM1-204ENST00000532838 PRDM2Q13029 1718 aa36.17■■■■□ 3.38
CKLF-CMTM1-204ENST00000532838 MRC2Q9UBG0 1479 aa36.17■■■■□ 3.38
CKLF-CMTM1-204ENST00000532838 WDR62O43379 1518 aa36.01■■■■□ 3.36
CKLF-CMTM1-204ENST00000532838 URB2Q14146 1524 aaKnown RBP35.82■■■■□ 3.32
CKLF-CMTM1-204ENST00000532838 ABCC8Q09428 1581 aa35.72■■■■□ 3.31
CKLF-CMTM1-204ENST00000532838 TOPBP1Q92547 1522 aa35.62■■■■□ 3.29
CKLF-CMTM1-204ENST00000532838 DNMBPQ6XZF7 1577 aa35.61■■■■□ 3.29
CKLF-CMTM1-204ENST00000532838 IFT140Q96RY7 1462 aa35.47■■■■□ 3.27
CKLF-CMTM1-204ENST00000532838 POLA1P09884 1462 aaPredicted RBP35.31■■■■□ 3.24
CKLF-CMTM1-204ENST00000532838 CUX1P39880 1505 aa35.31■■■■□ 3.24
CKLF-CMTM1-204ENST00000532838 DNAJC5Q9H3Z4 198 aa35.29■■■■□ 3.24
CKLF-CMTM1-204ENST00000532838 FGD5Q6ZNL6 1462 aa35.24■■■■□ 3.23
CKLF-CMTM1-204ENST00000532838 ZNF608Q9ULD9 1512 aaPredicted RBP35.22■■■■□ 3.23
CKLF-CMTM1-204ENST00000532838 SOGA1O94964 1423 aa35.21■■■■□ 3.23
CKLF-CMTM1-204ENST00000532838 TARBP1Q13395 1621 aaKnown RBP35.21■■■■□ 3.23
CKLF-CMTM1-204ENST00000532838 EIF4G3O43432 1585 aaKnown RBP35.14■■■■□ 3.22
CKLF-CMTM1-204ENST00000532838 RAD54L2Q9Y4B4 1467 aa35.14■■■■□ 3.22
CKLF-CMTM1-204ENST00000532838 WRNQ14191 1432 aaPredicted RBP eCLIP35.14■■■■□ 3.22
CKLF-CMTM1-204ENST00000532838 AQRO60306 1485 aaKnown RBP eCLIP35.04■■■■□ 3.2
CKLF-CMTM1-204ENST00000532838 WDR97A6NE52 1622 aa35.03■■■■□ 3.2
CKLF-CMTM1-204ENST00000532838 TOP2BQ02880 1626 aa35.03■■■■□ 3.2
CKLF-CMTM1-204ENST00000532838 BIVM-ERCC5R4GMW8 1640 aa35.03■■■■□ 3.2
CKLF-CMTM1-204ENST00000532838 TDRD9Q8NDG6 1382 aaKnown RBP35■■■■□ 3.19
CKLF-CMTM1-204ENST00000532838 SYNJ1O43426 1573 aa34.98■■■■□ 3.19
CKLF-CMTM1-204ENST00000532838 OSCARQ8IYS5 282 aa34.92■■■■□ 3.18
CKLF-CMTM1-204ENST00000532838 ABCA10Q8WWZ4 1543 aa34.89■■■■□ 3.18
CKLF-CMTM1-204ENST00000532838 GRIN2BQ13224 1484 aa34.82■■■■□ 3.16
CKLF-CMTM1-204ENST00000532838 GAPVD1Q14C86 1478 aa34.81■■■■□ 3.16
CKLF-CMTM1-204ENST00000532838 FBLN2P98095 1184 aa34.77■■■■□ 3.16
CKLF-CMTM1-204ENST00000532838 SNAPC4Q5SXM2 1469 aa34.75■■■■□ 3.15
CKLF-CMTM1-204ENST00000532838 MAGI1Q96QZ7 1491 aaPredicted RBP34.74■■■■□ 3.15
CKLF-CMTM1-204ENST00000532838 ABCA5Q8WWZ7 1642 aa34.73■■■■□ 3.15
CKLF-CMTM1-204ENST00000532838 PBRM1Q86U86 1689 aa34.73■■■■□ 3.15
CKLF-CMTM1-204ENST00000532838 CHD1O14646 1710 aa34.71■■■■□ 3.15
CKLF-CMTM1-204ENST00000532838 CHMP7Q8WUX9 453 aaPredicted RBP34.66■■■■□ 3.14
CKLF-CMTM1-204ENST00000532838 SYNJ2O15056 1496 aa34.59■■■■□ 3.13
CKLF-CMTM1-204ENST00000532838 ERICH3Q5RHP9 1530 aa34.51■■■■□ 3.12
CKLF-CMTM1-204ENST00000532838 KIF27Q86VH2 1401 aa34.45■■■■□ 3.11
CKLF-CMTM1-204ENST00000532838 ADAMTS12P58397 1594 aa34.43■■■■□ 3.1
CKLF-CMTM1-204ENST00000532838 FHAD1B1AJZ9 1412 aa34.41■■■■□ 3.1
CKLF-CMTM1-204ENST00000532838 GRIN2AQ12879 1464 aa34.35■■■■□ 3.09
CKLF-CMTM1-204ENST00000532838 TRIM41Q8WV44 630 aa34.35■■■■□ 3.09
CKLF-CMTM1-204ENST00000532838 RIMBP3CA6NJZ7 1639 aa34.28■■■■□ 3.08
CKLF-CMTM1-204ENST00000532838 RIMBP3BA6NNM3 1639 aa34.28■■■■□ 3.08
CKLF-CMTM1-204ENST00000532838 RIMBP3Q9UFD9 1639 aa34.28■■■■□ 3.08
CKLF-CMTM1-204ENST00000532838 ARHGEF11O15085 1522 aa34.28■■■■□ 3.08
CKLF-CMTM1-204ENST00000532838 CLASP1Q7Z460 1538 aa34.28■■■■□ 3.08
CKLF-CMTM1-204ENST00000532838 CUL7Q14999 1698 aa34.22■■■■□ 3.07
CKLF-CMTM1-204ENST00000532838 IGF1RP08069 1367 aa34.21■■■■□ 3.07
CKLF-CMTM1-204ENST00000532838 NUP160Q12769 1436 aa34.16■■■■□ 3.06
CKLF-CMTM1-204ENST00000532838 CEP170Q5SW79 1584 aa34.13■■■■□ 3.05
CKLF-CMTM1-204ENST00000532838 CARMIL1Q5VZK9 1371 aa34.07■■■■□ 3.04
CKLF-CMTM1-204ENST00000532838 CYB5RLQ6IPT4 315 aa34.01■■■■□ 3.03
CKLF-CMTM1-204ENST00000532838 ARAP1Q96P48 1450 aa33.96■■■■□ 3.03
CKLF-CMTM1-204ENST00000532838 RUSC2Q8N2Y8 1516 aa33.95■■■■□ 3.03
CKLF-CMTM1-204ENST00000532838 SHROOM2Q13796 1616 aa33.9■■■■□ 3.02
CKLF-CMTM1-204ENST00000532838 RAPGEF2Q9Y4G8 1499 aa33.88■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms