RNA–Protein interactions for RNA: ENST00000379060.8

TPT1-204, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 5 BASIC

Gene TPT1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-204ENST00000379060 AEBP2Q6ZN18 517 aaPredicted RBP25.23■■□□□ 1.63
TPT1-204ENST00000379060 CHIC1Q5VXU3 224 aa24.64■■□□□ 1.54
TPT1-204ENST00000379060 PHF23Q9BUL5 403 aaPredicted RBP21.72■■□□□ 1.07
TPT1-204ENST00000379060 SENP3Q9H4L4 574 aaPredicted RBP21.3■■□□□ 1
TPT1-204ENST00000379060 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
TPT1-204ENST00000379060 FOXD1Q16676 465 aa19.82■□□□□ 0.76
TPT1-204ENST00000379060 PPP6R1Q9UPN7 881 aa19.14■□□□□ 0.65
TPT1-204ENST00000379060 ADRA2BP18089 450 aa19.08■□□□□ 0.64
TPT1-204ENST00000379060 PIAS4Q8N2W9 510 aaPredicted RBP18.64■□□□□ 0.57
TPT1-204ENST00000379060 MSH5O43196 834 aa18.19■□□□□ 0.5
TPT1-204ENST00000379060 POTEDQ86YR6 584 aa17.95■□□□□ 0.46
TPT1-204ENST00000379060 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
TPT1-204ENST00000379060 SCAF1Q9H7N4 1312 aaKnown RBP17.36■□□□□ 0.37
TPT1-204ENST00000379060 KCNA4P22459 653 aa17.31■□□□□ 0.36
TPT1-204ENST00000379060 MAPK8IP2Q13387 824 aaPredicted RBP17.31■□□□□ 0.36
TPT1-204ENST00000379060 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
TPT1-204ENST00000379060 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
TPT1-204ENST00000379060 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
TPT1-204ENST00000379060 NPM3O75607 178 aaKnown RBP16.96■□□□□ 0.31
TPT1-204ENST00000379060 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
TPT1-204ENST00000379060 HOXD11P31277 338 aaPredicted RBP16.73■□□□□ 0.27
TPT1-204ENST00000379060 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
TPT1-204ENST00000379060 SLC4A1APQ9BWU0 796 aaKnown RBP16.44■□□□□ 0.22
TPT1-204ENST00000379060 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
TPT1-204ENST00000379060 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
TPT1-204ENST00000379060 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
TPT1-204ENST00000379060 ZBTB22O15209 634 aa15.98■□□□□ 0.15
TPT1-204ENST00000379060 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
TPT1-204ENST00000379060 FOXD4L1Q9NU39 408 aa15.88■□□□□ 0.13
TPT1-204ENST00000379060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
TPT1-204ENST00000379060 U3KPZ7 1027 aaPredicted RBP15.69■□□□□ 0.1
TPT1-204ENST00000379060 RNF39Q9H2S5 420 aa15.65■□□□□ 0.1
TPT1-204ENST00000379060 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
TPT1-204ENST00000379060 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
TPT1-204ENST00000379060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
TPT1-204ENST00000379060 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
TPT1-204ENST00000379060 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
TPT1-204ENST00000379060 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
TPT1-204ENST00000379060 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
TPT1-204ENST00000379060 ATF5Q9Y2D1 282 aaPredicted RBP15.28■□□□□ 0.04
TPT1-204ENST00000379060 SPINK5Q9NQ38 1064 aaPredicted RBP15.23■□□□□ 0.03
TPT1-204ENST00000379060 APLP2Q06481 763 aa15.21■□□□□ 0.03
TPT1-204ENST00000379060 CAPN15O75808 1086 aa15.09■□□□□ 0.01
TPT1-204ENST00000379060 ZNF219Q9P2Y4 722 aaPredicted RBP15.05■□□□□ -0
TPT1-204ENST00000379060 TRHP20396 242 aaPredicted RBP15.04■□□□□ -0
TPT1-204ENST00000379060 DSG3P32926 999 aa14.9□□□□□ -0.02
TPT1-204ENST00000379060 ABCB7O75027 752 aa14.84□□□□□ -0.03
TPT1-204ENST00000379060 POLA2Q14181 598 aa14.83□□□□□ -0.04
TPT1-204ENST00000379060 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
TPT1-204ENST00000379060 ZBTB12Q9Y330 459 aaPredicted RBP14.56□□□□□ -0.08
TPT1-204ENST00000379060 FBLN2P98095 1184 aa14.51□□□□□ -0.09
TPT1-204ENST00000379060 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
TPT1-204ENST00000379060 FKBP8Q14318 412 aa14.3□□□□□ -0.12
TPT1-204ENST00000379060 SPDYE4A6NLX3 237 aa14.24□□□□□ -0.13
TPT1-204ENST00000379060 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
TPT1-204ENST00000379060 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
TPT1-204ENST00000379060 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
TPT1-204ENST00000379060 SSUH2Q9Y2M2 353 aa14.16□□□□□ -0.14
TPT1-204ENST00000379060 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
TPT1-204ENST00000379060 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
TPT1-204ENST00000379060 PROM2Q8N271 834 aa14.11□□□□□ -0.15
TPT1-204ENST00000379060 AKT1S1Q96B36 256 aa13.99□□□□□ -0.17
TPT1-204ENST00000379060 POTEHQ6S545 545 aa13.97□□□□□ -0.17
TPT1-204ENST00000379060 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
TPT1-204ENST00000379060 REM2Q8IYK8 340 aaPredicted RBP13.88□□□□□ -0.19
TPT1-204ENST00000379060 NISCHQ9Y2I1 1504 aa13.76□□□□□ -0.21
TPT1-204ENST00000379060 SPDYE1Q8NFV5 336 aaPredicted RBP13.75□□□□□ -0.21
TPT1-204ENST00000379060 PITPNM1O00562 1244 aa13.73□□□□□ -0.21
TPT1-204ENST00000379060 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
TPT1-204ENST00000379060 STAG3Q9UJ98 1225 aa13.71□□□□□ -0.21
TPT1-204ENST00000379060 CLEC11AQ9Y240 323 aa13.66□□□□□ -0.22
TPT1-204ENST00000379060 VASPP50552 380 aaPredicted RBP13.61□□□□□ -0.23
TPT1-204ENST00000379060 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
TPT1-204ENST00000379060 CHRDL2Q6WN34 429 aa13.55□□□□□ -0.24
TPT1-204ENST00000379060 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
TPT1-204ENST00000379060 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
TPT1-204ENST00000379060 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
TPT1-204ENST00000379060 MIER1Q8N108 512 aa13.45□□□□□ -0.26
TPT1-204ENST00000379060 PLCD3Q8N3E9 789 aa13.43□□□□□ -0.26
TPT1-204ENST00000379060 PIP4P2Q8N4L2 257 aa13.42□□□□□ -0.26
TPT1-204ENST00000379060 MNX1P50219 401 aaPredicted RBP13.38□□□□□ -0.27
TPT1-204ENST00000379060 CHADLQ6NUI6 762 aa13.38□□□□□ -0.27
TPT1-204ENST00000379060 PRKAR2AP13861 404 aaKnown RBP13.35□□□□□ -0.27
TPT1-204ENST00000379060 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
TPT1-204ENST00000379060 KLHL34Q8N239 644 aa13.28□□□□□ -0.28
TPT1-204ENST00000379060 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.29
TPT1-204ENST00000379060 FARP1Q9Y4F1 1045 aaPredicted RBP13.25□□□□□ -0.29
TPT1-204ENST00000379060 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
TPT1-204ENST00000379060 NUBP1P53384 320 aa13.2□□□□□ -0.3
TPT1-204ENST00000379060 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
TPT1-204ENST00000379060 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
TPT1-204ENST00000379060 RTN4Q9NQC3 1192 aaKnown RBP13.12□□□□□ -0.31
TPT1-204ENST00000379060 AMER1Q5JTC6 1135 aaPredicted RBP13.1□□□□□ -0.31
TPT1-204ENST00000379060 PKD2Q13563 968 aa13.04□□□□□ -0.32
TPT1-204ENST00000379060 C19orf67A6NJJ6 358 aa13.01□□□□□ -0.33
TPT1-204ENST00000379060 FAM212AQ96EL1 285 aa13.01□□□□□ -0.33
TPT1-204ENST00000379060 GSE1Q14687 1217 aa12.98□□□□□ -0.33
TPT1-204ENST00000379060 CIZ1Q9ULV3 898 aaPredicted RBP12.98□□□□□ -0.33
TPT1-204ENST00000379060 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
TPT1-204ENST00000379060 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms