RNA–Protein interactions for RNA: ENST00000351137.8

CKLF-203, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-203ENST00000351137 NISCHQ9Y2I1 1504 aa39.98■■■■□ 3.99
CKLF-203ENST00000351137 ABCC9O60706 1549 aa37.01■■■■□ 3.52
CKLF-203ENST00000351137 CCDC180Q9P1Z9 1646 aa36.36■■■■□ 3.41
CKLF-203ENST00000351137 DNAJC5BQ9UF47 199 aa35.54■■■■□ 3.28
CKLF-203ENST00000351137 RB1CC1Q8TDY2 1594 aa35■■■■□ 3.19
CKLF-203ENST00000351137 NACADO15069 1562 aa34.59■■■■□ 3.13
CKLF-203ENST00000351137 PABPN1Q86U42 306 aaKnown RBP eCLIP34.25■■■■□ 3.07
CKLF-203ENST00000351137 UNC13AQ9UPW8 1703 aa34.13■■■■□ 3.05
CKLF-203ENST00000351137 BICRAQ9NZM4 1560 aa33.98■■■■□ 3.03
CKLF-203ENST00000351137 MYO15BQ96JP2 1530 aa33.94■■■■□ 3.02
CKLF-203ENST00000351137 DCAF8L2P0C7V8 631 aa33.86■■■■□ 3.01
CKLF-203ENST00000351137 SHROOM4Q9ULL8 1493 aa33.66■■■□□ 2.98
CKLF-203ENST00000351137 CECR2Q9BXF3 1484 aa33.54■■■□□ 2.96
CKLF-203ENST00000351137 CC2D2AQ9P2K1 1620 aa33.48■■■□□ 2.95
CKLF-203ENST00000351137 DNAJC5Q9H3Z4 198 aa33.45■■■□□ 2.95
CKLF-203ENST00000351137 EIF4G1Q04637 1599 aaKnown RBP33.22■■■□□ 2.91
CKLF-203ENST00000351137 DCAF1Q9Y4B6 1507 aa33.12■■■□□ 2.89
CKLF-203ENST00000351137 ZCCHC6Q5VYS8 1495 aaKnown RBP32.95■■■□□ 2.87
CKLF-203ENST00000351137 SCRIBQ14160 1630 aa32.84■■■□□ 2.85
CKLF-203ENST00000351137 CUX2O14529 1486 aa32.49■■■□□ 2.79
CKLF-203ENST00000351137 ERCC6Q03468 1493 aa32.08■■■□□ 2.73
CKLF-203ENST00000351137 NCAPD3P42695 1498 aa31.95■■■□□ 2.7
CKLF-203ENST00000351137 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
CKLF-203ENST00000351137 HMGXB3Q12766 1538 aa31.63■■■□□ 2.65
CKLF-203ENST00000351137 SMARCA2P51531 1590 aa31.56■■■□□ 2.64
CKLF-203ENST00000351137 NESP48681 1621 aa31.53■■■□□ 2.64
CKLF-203ENST00000351137 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.64
CKLF-203ENST00000351137 TRIM41Q8WV44 630 aa31.37■■■□□ 2.61
CKLF-203ENST00000351137 SMARCA4P51532 1647 aa31.36■■■□□ 2.61
CKLF-203ENST00000351137 LAMC3Q9Y6N6 1575 aa31.35■■■□□ 2.61
CKLF-203ENST00000351137 BAZ1BQ9UIG0 1483 aaKnown RBP31.25■■■□□ 2.59
CKLF-203ENST00000351137 PEG3Q9GZU2 1588 aa31.19■■■□□ 2.58
CKLF-203ENST00000351137 PDS5BQ9NTI5 1447 aa31.19■■■□□ 2.58
CKLF-203ENST00000351137 KIF21AQ7Z4S6 1674 aa31.14■■■□□ 2.58
CKLF-203ENST00000351137 BAZ1AQ9NRL2 1556 aaPredicted RBP31.12■■■□□ 2.57
CKLF-203ENST00000351137 MRC2Q9UBG0 1479 aa30.93■■■□□ 2.54
CKLF-203ENST00000351137 WDR62O43379 1518 aa30.92■■■□□ 2.54
CKLF-203ENST00000351137 CADPSQ9ULU8 1353 aa30.88■■■□□ 2.53
CKLF-203ENST00000351137 OSCARQ8IYS5 282 aa30.76■■■□□ 2.51
CKLF-203ENST00000351137 MROH2BQ7Z745 1585 aa30.71■■■□□ 2.51
CKLF-203ENST00000351137 CEP164Q9UPV0 1460 aa30.61■■■□□ 2.49
CKLF-203ENST00000351137 FANCD2Q9BXW9 1451 aa30.48■■■□□ 2.47
CKLF-203ENST00000351137 RIMBP3CA6NJZ7 1639 aa30.43■■■□□ 2.46
CKLF-203ENST00000351137 RIMBP3BA6NNM3 1639 aa30.43■■■□□ 2.46
CKLF-203ENST00000351137 RIMBP3Q9UFD9 1639 aa30.43■■■□□ 2.46
CKLF-203ENST00000351137 CFTRP13569 1480 aa30.35■■■□□ 2.45
CKLF-203ENST00000351137 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
CKLF-203ENST00000351137 URB2Q14146 1524 aaKnown RBP30.27■■■□□ 2.44
CKLF-203ENST00000351137 WIZO95785 1651 aa30.26■■■□□ 2.43
CKLF-203ENST00000351137 IFT140Q96RY7 1462 aa30.08■■■□□ 2.41
CKLF-203ENST00000351137 CYB5RLQ6IPT4 315 aa30■■■□□ 2.39
CKLF-203ENST00000351137 ZNF608Q9ULD9 1512 aaPredicted RBP30■■■□□ 2.39
CKLF-203ENST00000351137 PRDM2Q13029 1718 aa29.97■■■□□ 2.39
CKLF-203ENST00000351137 TOP2AP11388 1531 aaKnown RBP29.92■■■□□ 2.38
CKLF-203ENST00000351137 TRHP20396 242 aaPredicted RBP29.92■■■□□ 2.38
CKLF-203ENST00000351137 ARAP1Q96P48 1450 aa29.88■■■□□ 2.37
CKLF-203ENST00000351137 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
CKLF-203ENST00000351137 EIF4G3O43432 1585 aaKnown RBP29.83■■■□□ 2.37
CKLF-203ENST00000351137 ABCC8Q09428 1581 aa29.81■■■□□ 2.36
CKLF-203ENST00000351137 TOPBP1Q92547 1522 aa29.81■■■□□ 2.36
CKLF-203ENST00000351137 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
CKLF-203ENST00000351137 CHD1O14646 1710 aa29.76■■■□□ 2.35
CKLF-203ENST00000351137 DNMBPQ6XZF7 1577 aa29.64■■■□□ 2.34
CKLF-203ENST00000351137 TARBP1Q13395 1621 aaKnown RBP29.63■■■□□ 2.33
CKLF-203ENST00000351137 AQRO60306 1485 aaKnown RBP eCLIP29.61■■■□□ 2.33
CKLF-203ENST00000351137 CCDC88BA6NC98 1476 aa29.54■■■□□ 2.32
CKLF-203ENST00000351137 FBLN2P98095 1184 aa29.51■■■□□ 2.31
CKLF-203ENST00000351137 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
CKLF-203ENST00000351137 POLA1P09884 1462 aaPredicted RBP29.44■■■□□ 2.3
CKLF-203ENST00000351137 WDR97A6NE52 1622 aa29.42■■■□□ 2.3
CKLF-203ENST00000351137 SYNJ1O43426 1573 aa29.39■■■□□ 2.29
CKLF-203ENST00000351137 MAGI1Q96QZ7 1491 aaPredicted RBP29.31■■■□□ 2.28
CKLF-203ENST00000351137 SNAPC4Q5SXM2 1469 aa29.3■■■□□ 2.28
CKLF-203ENST00000351137 SOGA1O94964 1423 aa29.27■■■□□ 2.28
CKLF-203ENST00000351137 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.28
CKLF-203ENST00000351137 RAD54L2Q9Y4B4 1467 aa29.26■■■□□ 2.27
CKLF-203ENST00000351137 CHMP7Q8WUX9 453 aaPredicted RBP29.26■■■□□ 2.27
CKLF-203ENST00000351137 GAPVD1Q14C86 1478 aa29.2■■■□□ 2.26
CKLF-203ENST00000351137 SYNJ2O15056 1496 aa29.19■■■□□ 2.26
CKLF-203ENST00000351137 GRIN2BQ13224 1484 aa29.17■■■□□ 2.26
CKLF-203ENST00000351137 FGD5Q6ZNL6 1462 aa29.09■■■□□ 2.25
CKLF-203ENST00000351137 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
CKLF-203ENST00000351137 CUX1P39880 1505 aa28.92■■■□□ 2.22
CKLF-203ENST00000351137 ERCC6L2Q5T890 1561 aa28.82■■■□□ 2.2
CKLF-203ENST00000351137 KIF13AQ9H1H9 1805 aa28.82■■■□□ 2.2
CKLF-203ENST00000351137 ABCA5Q8WWZ7 1642 aa28.81■■■□□ 2.2
CKLF-203ENST00000351137 ABCA10Q8WWZ4 1543 aa28.8■■■□□ 2.2
CKLF-203ENST00000351137 CEP170Q5SW79 1584 aa28.78■■■□□ 2.2
CKLF-203ENST00000351137 GRIN2AQ12879 1464 aa28.78■■■□□ 2.2
CKLF-203ENST00000351137 NUP160Q12769 1436 aa28.77■■■□□ 2.2
CKLF-203ENST00000351137 SHROOM2Q13796 1616 aa28.75■■■□□ 2.19
CKLF-203ENST00000351137 ADAMTS12P58397 1594 aa28.63■■■□□ 2.17
CKLF-203ENST00000351137 ABCC10Q5T3U5 1492 aa28.6■■■□□ 2.17
CKLF-203ENST00000351137 ILDR1Q86SU0 546 aaPredicted RBP28.58■■■□□ 2.17
CKLF-203ENST00000351137 FHAD1B1AJZ9 1412 aa28.55■■■□□ 2.16
CKLF-203ENST00000351137 MAPKBP1O60336 1514 aa28.53■■■□□ 2.16
CKLF-203ENST00000351137 KDM4FA0A1W2PPD8 638 aa28.53■■■□□ 2.16
CKLF-203ENST00000351137 FAM69CQ0P6D2 419 aa28.5■■■□□ 2.15
CKLF-203ENST00000351137 WRNQ14191 1432 aaPredicted RBP eCLIP28.47■■■□□ 2.15
CKLF-203ENST00000351137 PRG4Q92954 1404 aaPredicted RBP28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms