RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 DCAF8L2P0C7V8 631 aa18.06■□□□□ 0.48
TPT1-214ENST00000616577 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
TPT1-214ENST00000616577 SUPT5HO00267 1087 aaKnown RBP17.52■□□□□ 0.4
TPT1-214ENST00000616577 SHROOM4Q9ULL8 1493 aa17.22■□□□□ 0.35
TPT1-214ENST00000616577 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
TPT1-214ENST00000616577 PCGF6Q9BYE7 350 aa16.59■□□□□ 0.25
TPT1-214ENST00000616577 FAM9AQ8IZU1 332 aaPredicted RBP16.51■□□□□ 0.23
TPT1-214ENST00000616577 TTBK1Q5TCY1 1321 aaPredicted RBP16.35■□□□□ 0.21
TPT1-214ENST00000616577 APLP2Q06481 763 aa16.29■□□□□ 0.2
TPT1-214ENST00000616577 PELP1Q8IZL8 1130 aaKnown RBP16.27■□□□□ 0.2
TPT1-214ENST00000616577 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
TPT1-214ENST00000616577 ZEB1P37275 1124 aaPredicted RBP16.08■□□□□ 0.17
TPT1-214ENST00000616577 CCER1Q8TC90 406 aaPredicted RBP16.07■□□□□ 0.16
TPT1-214ENST00000616577 RANGAP1P46060 587 aaPredicted RBP16.03■□□□□ 0.16
TPT1-214ENST00000616577 CENPBP07199 599 aaPredicted RBP16.03■□□□□ 0.16
TPT1-214ENST00000616577 PPARGC1BQ86YN6 1023 aaKnown RBP15.91■□□□□ 0.14
TPT1-214ENST00000616577 UBTFP17480 764 aaKnown RBP15.87■□□□□ 0.13
TPT1-214ENST00000616577 HRCP23327 699 aa15.87■□□□□ 0.13
TPT1-214ENST00000616577 YTHDC1Q96MU7 727 aaKnown RBP15.81■□□□□ 0.12
TPT1-214ENST00000616577 TRIM26Q12899 539 aaPredicted RBP15.8■□□□□ 0.12
TPT1-214ENST00000616577 LOC105371045A0A1W2PR82 267 aa15.78■□□□□ 0.12
TPT1-214ENST00000616577 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.11
TPT1-214ENST00000616577 ATP1B4Q9UN42 357 aaPredicted RBP15.74■□□□□ 0.11
TPT1-214ENST00000616577 ERICH6Q7L0X2 663 aa15.66■□□□□ 0.1
TPT1-214ENST00000616577 NEFLP07196 543 aa15.54■□□□□ 0.08
TPT1-214ENST00000616577 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
TPT1-214ENST00000616577 ITGAEP38570 1179 aa15.43■□□□□ 0.06
TPT1-214ENST00000616577 MYT1Q01538 1121 aa15.41■□□□□ 0.06
TPT1-214ENST00000616577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
TPT1-214ENST00000616577 DIEXFQ68CQ4 756 aaKnown RBP15.29■□□□□ 0.04
TPT1-214ENST00000616577 POLR3GLQ9BT43 218 aa15.18■□□□□ 0.02
TPT1-214ENST00000616577 CNGB1Q14028 1251 aaPredicted RBP15.15■□□□□ 0.02
TPT1-214ENST00000616577 GTF3C3Q9Y5Q9 886 aa15.09■□□□□ 0.01
TPT1-214ENST00000616577 FAM50AQ14320 339 aaKnown RBP14.97□□□□□ -0.01
TPT1-214ENST00000616577 DAXXQ9UER7 740 aaPredicted RBP14.95□□□□□ -0.02
TPT1-214ENST00000616577 BCANQ96GW7 911 aa14.95□□□□□ -0.02
TPT1-214ENST00000616577 NEUROD1Q13562 356 aa14.94□□□□□ -0.02
TPT1-214ENST00000616577 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
TPT1-214ENST00000616577 ZNF316A6NFI3 1004 aaPredicted RBP14.91□□□□□ -0.02
TPT1-214ENST00000616577 MYT1LQ9UL68 1186 aa14.89□□□□□ -0.03
TPT1-214ENST00000616577 ABCC9O60706 1549 aa14.89□□□□□ -0.03
TPT1-214ENST00000616577 ACIN1Q9UKV3 1341 aaKnown RBP14.89□□□□□ -0.03
TPT1-214ENST00000616577 TRIM52Q96A61 297 aa14.83□□□□□ -0.04
TPT1-214ENST00000616577 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
TPT1-214ENST00000616577 ANP32CO43423 234 aa14.77□□□□□ -0.05
TPT1-214ENST00000616577 RTL5Q5HYW3 569 aaPredicted RBP14.76□□□□□ -0.05
TPT1-214ENST00000616577 DCAF1Q9Y4B6 1507 aa14.7□□□□□ -0.06
TPT1-214ENST00000616577 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
TPT1-214ENST00000616577 ZNF326Q5BKZ1 582 aaKnown RBP14.7□□□□□ -0.06
TPT1-214ENST00000616577 CLSPNQ9HAW4 1339 aa14.7□□□□□ -0.06
TPT1-214ENST00000616577 P3H3Q8IVL6 736 aa14.67□□□□□ -0.06
TPT1-214ENST00000616577 CDK11AQ9UQ88 783 aaPredicted RBP14.66□□□□□ -0.06
TPT1-214ENST00000616577 ZCCHC6Q5VYS8 1495 aaKnown RBP14.59□□□□□ -0.07
TPT1-214ENST00000616577 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
TPT1-214ENST00000616577 ARID3CA6NKF2 412 aa14.57□□□□□ -0.08
TPT1-214ENST00000616577 MYO15BQ96JP2 1530 aa14.56□□□□□ -0.08
TPT1-214ENST00000616577 FKBP8Q14318 412 aa14.53□□□□□ -0.08
TPT1-214ENST00000616577 DDX10Q13206 875 aaKnown RBP14.5□□□□□ -0.09
TPT1-214ENST00000616577 FBLN2P98095 1184 aa14.47□□□□□ -0.09
TPT1-214ENST00000616577 SCRIBQ14160 1630 aa14.47□□□□□ -0.09
TPT1-214ENST00000616577 MIER1Q8N108 512 aa14.46□□□□□ -0.09
TPT1-214ENST00000616577 HNRNPUQ00839 825 aaKnown RBP eCLIP14.43□□□□□ -0.1
TPT1-214ENST00000616577 TONSLQ96HA7 1378 aa14.41□□□□□ -0.1
TPT1-214ENST00000616577 ZNF777Q9ULD5 760 aaPredicted RBP14.4□□□□□ -0.1
TPT1-214ENST00000616577 ANP32AP39687 249 aaKnown RBP14.38□□□□□ -0.11
TPT1-214ENST00000616577 NPM2Q86SE8 214 aaKnown RBP14.38□□□□□ -0.11
TPT1-214ENST00000616577 FAM9BQ8IZU0 186 aa14.37□□□□□ -0.11
TPT1-214ENST00000616577 CANXP27824 592 aaKnown RBP14.35□□□□□ -0.11
TPT1-214ENST00000616577 BCL11AQ9H165 835 aa14.34□□□□□ -0.11
TPT1-214ENST00000616577 HIRIP3Q9BW71 556 aaPredicted RBP14.34□□□□□ -0.11
TPT1-214ENST00000616577 CHIC2Q9UKJ5 165 aa14.3□□□□□ -0.12
TPT1-214ENST00000616577 SALL2Q9Y467 1007 aaPredicted RBP14.29□□□□□ -0.12
TPT1-214ENST00000616577 CLIP1P30622 1438 aa14.28□□□□□ -0.12
TPT1-214ENST00000616577 IRX6P78412 446 aaPredicted RBP14.26□□□□□ -0.13
TPT1-214ENST00000616577 RSF1Q96T23 1441 aaPredicted RBP14.26□□□□□ -0.13
TPT1-214ENST00000616577 ZBTB47Q9UFB7 747 aaPredicted RBP14.26□□□□□ -0.13
TPT1-214ENST00000616577 CEP162Q5TB80 1403 aa14.23□□□□□ -0.13
TPT1-214ENST00000616577 MRS2Q9HD23 443 aa14.22□□□□□ -0.13
TPT1-214ENST00000616577 CCDC136Q96JN2 1154 aa14.21□□□□□ -0.13
TPT1-214ENST00000616577 TMC1Q8TDI8 760 aa14.19□□□□□ -0.14
TPT1-214ENST00000616577 NBR1Q14596 966 aa14.18□□□□□ -0.14
TPT1-214ENST00000616577 NEFMP07197 916 aa14.15□□□□□ -0.14
TPT1-214ENST00000616577 SLC24A1O60721 1099 aa14.15□□□□□ -0.15
TPT1-214ENST00000616577 MTUS2Q5JR59 1369 aa14.14□□□□□ -0.15
TPT1-214ENST00000616577 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
TPT1-214ENST00000616577 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
TPT1-214ENST00000616577 GOLGA3Q08378 1498 aa14.12□□□□□ -0.15
TPT1-214ENST00000616577 EIF5BO60841 1220 aaKnown RBP14.12□□□□□ -0.15
TPT1-214ENST00000616577 RRP7BPQ9NSQ0 103 aa14.11□□□□□ -0.15
TPT1-214ENST00000616577 CHGAP10645 457 aaKnown RBP14.1□□□□□ -0.15
TPT1-214ENST00000616577 EIF4G2P78344 907 aaKnown RBP eCLIP14.1□□□□□ -0.15
TPT1-214ENST00000616577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.15
TPT1-214ENST00000616577 EEA1Q15075 1411 aa14.09□□□□□ -0.15
TPT1-214ENST00000616577 SENP3-EIF4A1A0A087X0R7 540 aa14.08□□□□□ -0.16
TPT1-214ENST00000616577 TNIKQ9UKE5 1360 aa14.08□□□□□ -0.16
TPT1-214ENST00000616577 WRNQ14191 1432 aaPredicted RBP eCLIP14.05□□□□□ -0.16
TPT1-214ENST00000616577 SUPT16HQ9Y5B9 1047 aaKnown RBP14.03□□□□□ -0.16
TPT1-214ENST00000616577 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
TPT1-214ENST00000616577 UPF2Q9HAU5 1272 aaKnown RBP14.03□□□□□ -0.16
TPT1-214ENST00000616577 TSPY4P0CV99 314 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms